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EMN Papers
- Database of articles cited by 3DEM data entries -

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List of structure papers

Showing 1 - 20 of 2,374 items (all data)

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The structure of the COPI coat determined within the cell

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Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR, and Molecular Dynamics Approach

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Structure of the human MHC-I peptide-loading complex.

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Structure of phycobilisome from the red alga Griffithsia pacifica.

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Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging.

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Proteasomes tether to two distinct sites at the nuclear pore complex

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Cryo EM structures of nucleosome breathing

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Structural insights into DNA cleavage activation of CRISPR-Cas9 system.

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Structural basis of bacterial transcription activation

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Cryo-EM structures of the human endolysosomal TRPML3 channel in three distinct states.

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Structural basis for high-affinity actin binding revealed by a β-III-spectrin SCA5 missense mutation.

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Structural insight into TPX2-stimulated microtubule assembly.

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Structural basis for antibody recognition of the NANP repeats in Plasmodium falciparum circumsporozoite protein

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The structural basis of flagellin detection by NAIP5: A strategy to limit pathogen immune evasion

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Atomic model for the dimeric FO region of mitochondrial ATP synthase.

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Architecture of eukaryotic mRNA 3'-end processing machinery.

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The structural basis of proton driven zinc transport by ZntB.

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Ensemble cryo-EM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme

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Design of coiled-coil protein-origami cages that self-assemble in vitro and in vivo.

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Cryo-EM Structure of Saccharomyces cerevisiae Target of Rapamycin Complex 2

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About EMN Papers

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News

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Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

  • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
  • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
  • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

External links: The 2017 Nobel Prize in Chemistry - Press Release

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Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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Jun 16, 2017. Omokage search with filter

Omokage search with filter

  • Result of Omokage search can be filtered by keywords and the database types

Related info.: Omokage search

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Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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EMN Papers

Database of articles cited by 3DEM data entries

  • Database of articles cited by 3DEM data entries in EMDB and PDB
  • Using PubMed data

Related info.: EMDB / PDB / Q: What is the data source of EM Navigator? / EM Navigator / Yorodumi Papers / Changes in new EM Navigator and Yorodumi

Read more