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EMN Papers
- Database of articles cited by 3DEM data entries -

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List of structure papers

Showing 1 - 20 of 2,600 items (all data)

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Structure of the herpes-simplex virus portal-vertex

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CryoEM structures of mouse-heart complex I reveal catalytically- relevant conformational changes

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Reducing effects of particle adsorption to the air-water interface in cryoEM

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Structure of the nuclear exosome captured on a maturing preribosome.

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Structural basis for ATP-dependent chromatin remodelling by the INO80 complex.

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High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane.

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Cryo-EM Structure of Virus-like-particle of Porcine Circovirus type 3 reveals an T=1 symmetry icosahedral particle

to be published,
Mo X / Yuan AY
Methods: EM (single particle, icos. sym.)

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Electron cryo-microscopy structure of the canonical TRPC4 ion channel

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Structural analysis of the SARS-CoV spike ACE2 receptor complex

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Cryo-EM structure of infectious bronchitis coronavirus spike protein reveals structural and functional evolution of coronavirus spike proteins

To Be Published,
Shang J / Zheng Y / Yang Y / Liu C / Geng Q / Luo C / Zhang W / Li F
Methods: EM (single particle)

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Enterovirus D68 dependency on pan-enterovirus host factor PLA2G16 is determined by receptor usage

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Structural diversity of neurexin 1 alpha: implications for its role as synaptic organizer.

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Modular assembly of the nucleolar pre-60S ribosomal subunit.

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Structure of the insulin receptor-insulin complex by single-particle cryo-EM analysis.

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Structural insights into the voltage and phospholipid activation of the mammalian TPC1 channel.

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Architecture of the human GATOR1 and GATOR1-Rag GTPases complexes.

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Cryo-EM structure of the Blastochloris viridis LH1-RC complex at 2.9 Å.

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Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3).

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Rabbit muscle aldolase at 4.6 A resolution (17nov02c 1st700img, 75K particles)

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Rabbit muscle aldolase at 2.8 A resolution (17sep21j 1st 500 img, 62k particles)

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About EMN Papers

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News

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Feb 20, 2018. PDBj/BINDS workshop in Osaka University

PDBj/BINDS workshop in Osaka University

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    Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

    Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

    • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
    • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
    • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

    External links: The 2017 Nobel Prize in Chemistry - Press Release

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    Jul 12, 2017. Major update of PDB

    Major update of PDB

    • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
    • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

    External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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    Jun 16, 2017. Omokage search with filter

    Omokage search with filter

    • Result of Omokage search can be filtered by keywords and the database types

    Related info.: Omokage search

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    Sep 15, 2016. EM Navigator & Yorodumi renewed

    EM Navigator & Yorodumi renewed

    • New versions of EM Navigator and Yorodumi started

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

    Read more

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    EMN Papers

    Database of articles cited by 3DEM data entries

    • Database of articles cited by 3DEM data entries in EMDB and PDB
    • Using PubMed data

    Related info.: EMDB / PDB / Q: What is the data source of EM Navigator? / EM Navigator / Yorodumi Papers / Changes in new EM Navigator and Yorodumi

    Read more