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EMN Papers
- Database of articles cited by 3DEM data entries -

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List of structure papers

Showing 1 - 20 of 2,759 items (all data)

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Structural basis of pan-ebolavirus neutralization by an antibody targeting the glycoprotein fusion loop

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Cryo-EM structure of serotonin bound 5HT3A receptor (state 2)

To be Published,
Basak S / Chakrapani S
Methods: EM (single particle)

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Prespliceosome structure provides insights into spliceosome assembly and regulation.

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Structures of human Patched and its complex with native palmitoylated sonic hedgehog.

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Cryo-EM structure of a fungal mitochondrial calcium uniporter.

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X-ray and cryo-EM structures of the mitochondrial calcium uniporter.

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Cryo-EM structures of fungal and metazoan mitochondrial calcium uniporters.

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Correcting errors in the BRCA1 warning system

To be Published,
Kelly DF / Dearnaley WJ / Liang Y
Methods: EM (single particle)

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cryo-em structure of alpha-synuclein fiber

To Be Published,
Li YW / Zhao CY / Luo F / Liu Z / Gui X / Luo Z / Zhang X / Li D / Liu C / Li X
Methods: EM (helical sym.)

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The reovirus mu1 protein contributes to the environmental stability of virions

To be Published,
Snyder AJ / Wang JCY / Danthi P
Methods: EM (single particle)

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Structural basis for regulation of inositol trisphosphate receptors by Ca2+ and IP3

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Cryo-EM structure of an essential Plasmodium vivax invasion complex.

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Cryo-EM structure of the polycystin 2-l1 ion channel.

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High-resolution Cryo-EM of Fab-labeled human parechovirus 3 provides mechanistic insights into neutralization and assembly

To Be Published,
Domanska A / Flatt JW / Jukonen JJJ / Geraets JA / Butcher SJ
Methods: EM (single particle, icos. sym.)

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Structure and assembly of competence co-regulated type 4 pilus from Enterohemorrhagic Escherichia coli

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Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly.

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Virion structure and genome delivery mechanism of sacbrood honeybee virus.

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Conformational proofreading of distant 40S subunit maturation events by a long-range communication mechanism

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ComM is a hexameric helicase that promotes branch migration during natural transformation in diverse Gram-negative species.

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Structural basis for the recognition of Sonic Hedgehog by human Patched1.

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About EMN Papers

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News

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Feb 20, 2018. PDBj/BINDS workshop in Osaka University

PDBj/BINDS workshop in Osaka University

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    Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

    Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

    • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
    • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
    • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

    External links: The 2017 Nobel Prize in Chemistry - Press Release

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    Jul 12, 2017. Major update of PDB

    Major update of PDB

    • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
    • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

    External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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    Jun 16, 2017. Omokage search with filter

    Omokage search with filter

    • Result of Omokage search can be filtered by keywords and the database types

    Related info.: Omokage search

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    Sep 15, 2016. EM Navigator & Yorodumi renewed

    EM Navigator & Yorodumi renewed

    • New versions of EM Navigator and Yorodumi started

    Related info.: Changes in new EM Navigator and Yorodumi

    Read more

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    EMN Papers

    Database of articles cited by 3DEM data entries

    • Database of articles cited by 3DEM data entries in EMDB and PDB
    • Using PubMed data

    Related info.: EMDB / PDB / Q: What is the data source of EM Navigator? / EM Navigator / Yorodumi Papers / Changes in new EM Navigator and Yorodumi

    Read more