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Showing 1 - 50 of 8,957 items (all data)

EMDB-3676:
Atomic Structure of the Broad Bean Stain Virus (BBSV) by cryo-EM
Method: icosahedral / : Lecorre F, Bron P, Lai Kee Him J

EMDB-4270:
Chloroplast F1Fo conformation 1
Method: single particle / : Hahn A, Vonck J

EMDB-4271:
Chloroplast F1Fo conformation 2
Method: single particle / : Hahn A, Vonck J

EMDB-4272:
Chloroplast F1Fo conformation 3
Method: single particle / : Hahn A, Vonck J

EMDB-4273:
Fo conformation 1
Method: single particle / : Hahn A, Vonck J, Mills DJ, Kuehlbrandt W, Meier T

EMDB-4361:
Cryo-EM density of heteromeric mLRRC8A/C volume-regulated anion channel at 7.94 A resolution
Method: single particle / : Sawicka M, Deneka D, Lam AKM, Paulino C, Dutzler R

EMDB-4391:
Structure of P-glycoprotein(ABCB1) in the post-hydrolytic state
Method: single particle / : Ford RC, Thonghin N

EMDB-6663:
Structure of RIP2 CARD domain
Method: helical / : Wu B, Gong Q

EMDB-6737:
Natural chromatin is heterogeneous and self associates in vitro
Method: electron tomography / : Cai S, Song Y, Chen C, Shi J, Gan L

EMDB-6844:
Cofilin decorated actin filament
Method: helical / : Tanaka K, Narita A

EMDB-6856:
Cryo-EM structure of human TRPC6 at 3.8A resolution
Method: single particle / : Chen L, Tang Q

EMDB-6954:
Doublet microtubule of zebrafish sperm axoneme, WT
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6955:
Doublet microtubule of zebrafish sperm axoneme, pih1d1_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6956:
Doublet microtubule of zebrafish sperm axoneme, pih1d2_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6957:
Doublet microtubule of zebrafish sperm axoneme, ktu_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6958:
Doublet microtubule of zebrafish sperm axoneme, twister_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6959:
Doublet microtubule of zebrafish sperm axoneme, pih1d2, ktu, double_mutant, +OAD
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6960:
Doublet microtubule of zebrafish sperm axoneme, pih1d2, ktu, double_mutant, -OAD
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-7446:
Structure of the DASH/Dam1 complex shows its role at the yeast kinetochore-microtubule interface (symmetric reconstruction)
Method: single particle / : Jenni S, Harrison SC

EMDB-7466:
Segment NFGTFS, with familial mutation A315T and phosphorylated threonine, from the low complexity domain of TDP-43, residues 312-317
Method: electron crystallography / : Guenther EL, Cao Q

EMDB-7467:
SWGMMGMLASQ segment from the low complexity domain of TDP-43
Method: electron crystallography / : Guenther EL, Rodriguez JA

EMDB-7468:
cryoEM structure of a respiratory membrane-bound hydrogenase
Method: single particle / : Li HL, Yu HJ

EMDB-7637:
Cytoplasmic domain of mTRPC6
Method: single particle / : Azumaya CM, Sierra-Valdez FJ

EMDB-7769:
Cryo-EM reconstruction of synthetic tau: four tandem repeats of first repeat (R1) sequence, bound to the microtubule
Method: helical / : Nogales E, Kellogg EH

EMDB-7771:
Cryo-EM reconstruction of microtubule-bound synthetic (R2x4) tau
Method: helical / : Nogales E, Kellogg EH

EMDB-7788:
Insulin Receptor ectodomain in complex with two insulin molecules plunged with a spot-to-plunge time of 200 ms
Method: single particle / : Noble AJ, Wei H, Dandey VP, Zhang Z, Potter CS, Carragher B

EMDB-7791:
Insulin Receptor ectodomain in complex with two insulin molecules plunged with a spot-to-plunge time of 800 ms
Method: single particle / : Noble AJ, Wei H, Dandey VP, Zhang Z, Potter CS, Carragher B

EMDB-8857:
MicroED structure of the segment, NFGEFS, from the A315E familial variant of the low complexity domain of TDP-43, residues 312-317
Method: electron crystallography / : Guenther EL, Sawaya MR

PDB-5npx:
Atomic Structure of the Broad Bean Stain Virus (BBSV) by cryo-EM
Method: single particle / : Lecorre F, Trapani S

PDB-5wkb:
MicroED structure of the segment, NFGEFS, from the A315E familial variant of the low complexity domain of TDP-43, residues 312-317
Method: electron crystallography / : Guenther EL, Sawaya MR, Cascio D, Eisenberg DS

PDB-5yu8:
Cofilin decorated actin filament
Method: helical / : Tanaka K, Narita A

PDB-5yx9:
Cryo-EM structure of human TRPC6 at 3.8A resolution
Method: single particle / : Chen L, Tang Q, Guo W

PDB-6cf4:
Segment NFGTFS, with familial mutation A315T and phosphorylated threonine, from the low complexity domain of TDP-43, residues 312-317
Method: electron crystallography / : Guenther EL, Cao Q, Boyer DR, Sawaya MR, Eisenberg DS

PDB-6cfh:
SWGMMGMLASQ segment from the low complexity domain of TDP-43
Method: electron crystallography / : Guenther EL, Rodriguez JA, Sawaya MR, Eisenberg DS

PDB-6cfw:
cryoEM structure of a respiratory membrane-bound hydrogenase
Method: single particle / : Li HL, Yu HJ

PDB-6cv9:
Cytoplasmic domain of mTRPC6
Method: single particle / : Azumaya CM, Sierra-Valdez FJ, Cordero-Morales JF, Nakagawa T

PDB-6cvj:
Model of synthetic tau (four tandem repeats of first repeat sequence) bound to the microtubule
Method: helical / : Nogales E, Kellogg EH

PDB-6cvn:
Model of synthetic tau (R2x4) bound to the microtubule
Method: helical / : Nogales E, Kellogg EH

PDB-6fkf:
Chloroplast F1Fo conformation 1
Method: single particle / : Hahn A, Vonck J, Mills DJ, Meier T, Kuehlbrandt W

PDB-6fkh:
Chloroplast F1Fo conformation 2
Method: single particle / : Hahn A, Vonck J, Mills DJ, Meier T, Kuehlbrandt W

PDB-6fki:
Chloroplast F1Fo conformation 3
Method: single particle / : Hahn A, Vonck J, Mills DJ, Meier T, Kuehlbrandt W

PDB-6gdi:
Structure of P-glycoprotein(ABCB1) in the post-hydrolytic state
Method: single particle / : Ford RC, Thonghin N, Collins RF, Barbieri A, Shafi T, Siebert A

EMDB-3885:
YaxAB pore complex
Method: single particle / : Braeuning B, Bertosin E, Dietz H, Groll M

EMDB-4221:
NCP interactions : Class A1
Method: single particle / : Halic M, Bilokapic S

EMDB-4222:
NCP interactions : Class A2
Method: single particle / : Halic M, Bilokapic S

EMDB-4223:
NCP interactions : Class A3
Method: single particle / : Halic M, Bilokapic S

EMDB-4224:
NCP interactions : Class A4
Method: single particle / : Halic M, Bilokapic S

EMDB-4226:
NCP interactions : Class A5
Method: single particle / : Halic M, Bilokapic S

EMDB-4227:
NCP interactions : Class A6
Method: single particle / : Halic M, Bilokapic S

EMDB-4228:
NCP interactions : Class B1
Method: single particle / : Halic M, Bilokapic S

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Feb 20, 2018. PDBj/BINDS workshop in Osaka University

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    Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

    • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
    • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
    • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

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    • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

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