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4X8O
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BU of 4x8o by Molmil
Crystal structure of E. coli Adenylate kinase Y171W mutant in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4WM5
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BU of 4wm5 by Molmil
High pressure protein crystallography of hen egg white lysozyme at 890 MPa
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Yamada, H, Nagae, T, Watanabe, N.
Deposit date:2014-10-08
Release date:2015-04-08
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-pressure protein crystallography of hen egg-white lysozyme
Acta Crystallogr.,Sect.D, 71, 2015
2WQT
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BU of 2wqt by Molmil
Dodecahedral assembly of MhpD
Descriptor: 2-KETO-4-PENTENOATE HYDRATASE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Montgomery, M.G, Wood, S.P.
Deposit date:2009-08-27
Release date:2010-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Assembly of a 20Nm Protein Cage by Escherichia Coli 2-Hydroxypentadienoic Acid Hydratase (Mhpd).
J.Mol.Biol., 396, 2010
4TRO
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BU of 4tro by Molmil
Structure of the enoyl-ACP reductase of Mycobacterium tuberculosis InhA, inhibited with the active metabolite of isoniazid
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
Authors:Chollet, A, Julien, S, Mourey, L, Maveyraud, L.
Deposit date:2014-06-17
Release date:2015-04-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the enoyl-ACP reductase of Mycobacterium tuberculosis (InhA) in the apo-form and in complex with the active metabolite of isoniazid pre-formed by a biomimetic approach.
J.Struct.Biol., 190, 2015
4TTG
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BU of 4ttg by Molmil
Beta-galactosidase (E. coli) in the presence of potassium chloride.
Descriptor: Beta-galactosidase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Juers, D.H.
Deposit date:2014-06-20
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elucidating factors important for monovalent cation selectivity in enzymes: E. coli beta-galactosidase as a model.
Phys Chem Chem Phys, 17, 2015
4RT3
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BU of 4rt3 by Molmil
Ternary complex crystal structure of DNA polymerase Beta with (alpha, beta)-NH-(beta,gamma)-CH2-dTTP
Descriptor: 2'-deoxy-5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]amino}phosphoryl]-3,4-dihydrothymidine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2014-11-12
Release date:2015-07-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Two Scaffolds from Two Flips: (alpha, beta)/(beta, gamma) CH2/NH "Met-Im" Analogues of dTTP.
Org.Lett., 17, 2015
4ZB6
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BU of 4zb6 by Molmil
Crystal structure of glutathione transferase URE2P4 from Phanerochaete chrysosporium in complex with oxidized glutathione.
Descriptor: OXIDIZED GLUTATHIONE DISULFIDE, PcUre2p4, SODIUM ION
Authors:Roret, T, Didierjean, C.
Deposit date:2015-04-14
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Evolutionary divergence of Ure2pA glutathione transferases in wood degrading fungi.
Fungal Genet. Biol., 83, 2015
3G8Q
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BU of 3g8q by Molmil
A cytidine deaminase edits C-to-U in transfer RNAs in archaea
Descriptor: Predicted RNA-binding protein, contains THUMP domain, SODIUM ION, ...
Authors:Xiong, Y, Stanley, B.J.
Deposit date:2009-02-12
Release date:2009-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A cytidine deaminase edits C to U in transfer RNAs in Archaea
Science, 324, 2009
4ZK6
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BU of 4zk6 by Molmil
Crystallographic Capture of Quinolinate Synthase (NadA) from Pyrococcus horikoshii in its Substrates and Product-Bound States
Descriptor: ACETATE ION, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Esakova, O.A, Grove, T.L, Saunders, A.H, Yennawar, N.H, Booker, S.J.
Deposit date:2015-04-29
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Structure of Quinolinate Synthase from Pyrococcus horikoshii in the Presence of Its Product, Quinolinic Acid.
J.Am.Chem.Soc., 138, 2016
4WPK
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BU of 4wpk by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase, Form I
Descriptor: CITRIC ACID, SODIUM ION, Uracil-DNA glycosylase
Authors:Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
Deposit date:2014-10-20
Release date:2015-07-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4Z50
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BU of 4z50 by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20D25N with Tucked Flap
Descriptor: CHLORIDE ION, GLYCEROL, Protease, ...
Authors:Agniswamy, J, Shen, C.-H, Weber, I.T.
Deposit date:2015-04-02
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Conformational variation of an extreme drug resistant mutant of HIV protease.
J.Mol.Graph.Model., 62, 2015
6DW5
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BU of 6dw5 by Molmil
SAMHD1 Bound to Gemcitabine-TP in the Catalytic Pocket
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-deoxy-2',2'-difluorocytidine 5'-(tetrahydrogen triphosphate), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
Authors:Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
Deposit date:2018-06-26
Release date:2018-10-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4X5V
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BU of 4x5v by Molmil
Crystal structure of the post-catalytic nick complex of DNA polymerase lambda with a templating A and incorporated 8-oxo-dGMP
Descriptor: CITRIC ACID, DNA (5'-D(*CP*AP*GP*TP*AP*CP*(8OG))-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Burak, M.J, Guja, K.E, Garcia-Diaz, M.
Deposit date:2014-12-05
Release date:2015-10-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Nucleotide binding interactions modulate dNTP selectivity and facilitate 8-oxo-dGTP incorporation by DNA polymerase lambda.
Nucleic Acids Res., 43, 2015
6KTR
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BU of 6ktr by Molmil
Crystal structure of fibroblast growth factor 19 in complex with Fab
Descriptor: Fibroblast growth factor 19, G1A8-Fab-HC, G1A8-Fab-LC, ...
Authors:Liu, H, Zheng, S, Hou, X, Liu, X, Lv, X, Li, Y, Li, W, Sui, J.
Deposit date:2019-08-28
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.59775758 Å)
Cite:Novel Abs targeting the N-terminus of fibroblast growth factor 19 inhibit hepatocellular carcinoma growth without bile-acid-related side-effects.
Cancer Sci., 111, 2020
4WXS
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BU of 4wxs by Molmil
Crystal Structure of the E396D SNP Variant of the Myocilin Olfactomedin Domain
Descriptor: CALCIUM ION, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Donegan, R.K, Freeman, D.M, Lieberman, R.L.
Deposit date:2014-11-14
Release date:2015-04-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for misfolding in myocilin-associated glaucoma.
Hum.Mol.Genet., 24, 2015
4WXP
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BU of 4wxp by Molmil
X-ray crystal structure of NS3 Helicase from HCV with a bound fragment inhibitor at 2.08 A resolution
Descriptor: (1-methyl-1H-indol-3-yl)acetic acid, CHLORIDE ION, NS3-4 protease, ...
Authors:Davies, D.R.
Deposit date:2014-11-14
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:crystal structure of NS3 Helicase from HCV with a bound fragment inhibitor
TO BE PUBLISHED
4X0S
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BU of 4x0s by Molmil
Hexamer formed by a macrocycle containing a sequence from beta-2-microglobulin (63-69).
Descriptor: CHLORIDE ION, ORN-TYR-LEU-LEU-PHI-TYR-VAL-GLU-ORN-LYS-VAL-ALA-MAA-ALA-VAL-LYS, SODIUM ION, ...
Authors:Spencer, R.K, Salveson, P.J, Nowick, J.S.
Deposit date:2014-11-23
Release date:2015-05-06
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.032 Å)
Cite:X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin.
J.Am.Chem.Soc., 137, 2015
4RT2
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BU of 4rt2 by Molmil
Ternary complex crystal structure of DNA polymerase Beta with (alpha,beta)-CH2-(beta,gamma)-NH-dTTP
Descriptor: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonoamino)phosphoryl]methyl}phosphoryl]-3,4-dihydrothymidine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2014-11-12
Release date:2015-07-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Two Scaffolds from Two Flips: (alpha, beta)/(beta, gamma) CH2/NH "Met-Im" Analogues of dTTP.
Org.Lett., 17, 2015
3PNC
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BU of 3pnc by Molmil
Ternary crystal structure of a polymerase lambda variant with a GT mispair at the primer terminus and sodium at catalytic metal site
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*CP*AP*GP*TP*AP*G)-3', ...
Authors:Bebenek, K, Pedersen, L.C, Kunkel, T.A.
Deposit date:2010-11-18
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Replication infidelity via a mismatch with Watson-Crick geometry.
Proc.Natl.Acad.Sci.USA, 108, 2011
4X30
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BU of 4x30 by Molmil
Crystal structure of human Thyroxine-binding globulin complexed with thyroine at 1.55 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 3,5,3',5'-TETRAIODO-L-THYRONINE, FLUORIDE ION, ...
Authors:Qi, X.
Deposit date:2014-11-27
Release date:2015-12-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of human Thyroxine-binding globulin complexed with thyroine at 1.55 Angstrom resolution
To Be Published
4RZM
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BU of 4rzm by Molmil
Crystal structure of the Lsd19-lasalocid A complex
Descriptor: CHLORIDE ION, Epoxide hydrolase LasB, FORMIC ACID, ...
Authors:Mathews, I.I, Hotta, K, Chen, X, Kim, C.-Y.
Deposit date:2014-12-22
Release date:2015-01-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Epoxide hydrolase-lasalocid a structure provides mechanistic insight into polyether natural product biosynthesis.
J.Am.Chem.Soc., 137, 2015
6EQX
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BU of 6eqx by Molmil
X-ray structure of the proprotein convertase furin bound with the competitive inhibitor Arg-Arg-Arg-Val-Arg-Amba
Descriptor: Arg-Arg-Arg-Val-Arg-00S, CALCIUM ION, CHLORIDE ION, ...
Authors:Dahms, S.O, Than, M.E.
Deposit date:2017-10-16
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:X-ray Structures of the Proprotein Convertase Furin Bound with Substrate Analogue Inhibitors Reveal Substrate Specificity Determinants beyond the S4 Pocket.
Biochemistry, 57, 2018
6KXH
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BU of 6kxh by Molmil
Alp1U_Y247F mutant in complex with Fluostatin C
Descriptor: D-MALATE, Fluostatin C, Putative hydrolase, ...
Authors:Zhang, L, Yingli, Z, De, B.C, Zhang, C.
Deposit date:2019-09-11
Release date:2020-09-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.78039551 Å)
Cite:Mutation of an atypical oxirane oxyanion hole improves regioselectivity of the alpha / beta-fold epoxide hydrolase Alp1U.
J.Biol.Chem., 295, 2020
6Z48
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BU of 6z48 by Molmil
Crystal structure of Thrombin in complex with macrocycle X1vE
Descriptor: 5-chloranyl-N-[[(4S,15R)-2,5,13,16-tetrakis(oxidanylidene)-15-propan-2-yl-9,10-dithia-3,6,14,17-tetrazabicyclo[17.3.1]tricosa-1(22),19(23),20-trien-4-yl]methyl]thiophene-2-carboxamide, SODIUM ION, Thrombin heavy chain, ...
Authors:Angelini, A, Habeshian, S, Heinis, C, Cendron, L.
Deposit date:2020-05-23
Release date:2022-06-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Synthesis and direct assay of large macrocycle diversities by combinatorial late-stage modification at picomole scale.
Nat Commun, 13, 2022
4S2L
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BU of 4s2l by Molmil
Crystal Structure of OXA-163 beta-lactamase
Descriptor: Beta-lactamase, SODIUM ION
Authors:Stojanoski, V, Liya, H, Palzkill, T.G, Prasad, B, Sankaran, B.
Deposit date:2015-01-21
Release date:2015-07-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural Basis for Different Substrate Profiles of Two Closely Related Class D beta-Lactamases and Their Inhibition by Halogens.
Biochemistry, 54, 2015

223532

PDB entries from 2024-08-07

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