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Legacy flatfile-incompatible PDB entries
10AD
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BU of 10ad by Molmil
Cryo-EM structure of the human BK channel bound to the agonist NS1619
Descriptor: 3-[2-oxidanyl-5-(trifluoromethyl)phenyl]-6-(trifluoromethyl)-1~{H}-benzimidazol-2-one, CALCIUM ION, Isoform 5 of Calcium-activated potassium channel subunit alpha-1, ...
Authors:Gonzalez-Sanabria, N, Contreras, G.F, Perozo, E, Latorre, R.
Deposit date:2026-01-08
Release date:2026-02-04
Last modified:2026-02-11
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:The BK channel-NS1619 agonist complex reveals molecular insights into allosteric activation gating.
Proc.Natl.Acad.Sci.USA, 123, 2026
10IC
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BU of 10ic by Molmil
Rhesus rotavirus (consensus structure at 4.7 Angstrom resolution from cryo-ET)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:de Sautu, M, Leistner, C, Kirchhausen, T, Jenni, S, Harrison, S.C.
Deposit date:2026-01-21
Release date:2026-03-04
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Mechanism of membrane perforation in rotavirus cell entry.
Biorxiv, 2026
10JT
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BU of 10jt by Molmil
CRYSTAL STRUCTURE OF KIRSTEN RAT SARCOMA G12C COMPLEXED WITH GMPPNP AND COVALENTLY BOUND TO 1-[(2R,3R)-3-{[(7P)-7-(8-ethynyl-7-fluoronaphthalen-1-yl)-8-fluoro-2-{ [(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d] pyrimidin-4-yl](methyl)amino}-2-methylpyrrolidin-1-yl]-3-(pyrazin-2-yl)propan-1-one
Descriptor: 1-[(2R,3R)-3-{[(7P)-7-(8-ethynyl-7-fluoronaphthalen-1-yl)-8-fluoro-2-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-4-yl](methyl)amino}-2-methylpyrrolidin-1-yl]-3-(pyrazin-2-yl)propan-1-one, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Sheriff, S.
Deposit date:2026-01-22
Release date:2026-03-04
Method:X-RAY DIFFRACTION (1.489 Å)
Cite:Optimization of Covalent Warhead Trajectory for KRAS G12C Active State Inhibition
To Be Published
10KZ
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BU of 10kz by Molmil
N-Alkyl & N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable Plasma Kallikrein Inhibitors
Descriptor: (3'R)-1'-(1-benzyl-1H-pyrazole-4-carbonyl)-6-chloro-5-fluorospiro[[3,1]benzoxazine-4,3'-piperidin]-2(1H)-one, Plasma kallikrein
Authors:Merchant, R.R, Chernyak, N, Lopez, J.A, Sharp, P.P, Mandal, M, He, J, Hruza, A, Rearden, P, Tatosian, D.A, Lin, K, Esmay, J, Yang, S, Cheng, A, Ellsworth, K, Piou, T, Fier, P, Hicks, J, Sinz, C, Ogawa, A.
Deposit date:2026-01-26
Release date:2026-03-11
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:N-Alkyl and N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable Plasma Kallikrein Inhibitors
Acs Med.Chem.Lett., 2026
10LR
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BU of 10lr by Molmil
N-Alkyl & N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable PlasmaKallikrein Inhibitors complex with Compound 4 ((3'R)-1'-(5-amino-1-benzyl-1H-pyrazole-4-carbonyl)-6-chloro-5-fluorospiro[[3,1]benzoxazine-4,3'-piperidin]-2(1H)-one)
Descriptor: (3'R)-1'-(5-amino-1-benzyl-1H-pyrazole-4-carbonyl)-6-chloro-5-fluorospiro[[3,1]benzoxazine-4,3'-piperidin]-2(1H)-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Merchant, R.R, Chernyak, N, Lopez, J.A, Sharp, P.P, Mandal, M, He, J, Hruza, A, Rearden, P, Tatosian, D.A, Lin, K, Esmay, J, Yang, S, Cheng, A, Ellsworth, K, Piou, T, Fier, P, Hicks, J, Sinz, C, Ogawa, A.
Deposit date:2026-01-27
Release date:2026-03-11
Method:X-RAY DIFFRACTION (1.583 Å)
Cite:N-Alkyl and N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable Plasma Kallikrein Inhibitors
Acs Med.Chem.Lett., 2026
10MW
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BU of 10mw by Molmil
N-Alkyl & N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable Plasma Kallikrein Inhibitors compound 25 ((3'R)-1'-{(1P)-5-amino-1-[2-(trifluoromethoxy)phenyl]-1H-pyrazole-4-carbonyl}-6-chloro-5-fluorospiro[[3,1]benzoxazine-4,3'-piperidin]-2(1H)-one)
Descriptor: (3'R)-1'-{(1P)-5-amino-1-[2-(trifluoromethoxy)phenyl]-1H-pyrazole-4-carbonyl}-6-chloro-5-fluorospiro[[3,1]benzoxazine-4,3'-piperidin]-2(1H)-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Merchant, R.R, Chernyak, N, Lopez, J.A, Sharp, P.P, Mandal, M, Je, J, Hruza, A, Rearden, P, Tatosian, D.A, Lin, K, Esmay, J, Yang, S, Cheng, A, Ellsworth, K, Poiou, T, Fier, P, Hicks, J, Sinz, C, Ogawa, A.
Deposit date:2026-01-28
Release date:2026-03-11
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:N-Alkyl and N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable Plasma Kallikrein Inhibitors
Acs Med.Chem.Lett., 2026
10PX
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BU of 10px by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Chen, C.-W, Volynkina, I.A, Bortyazh, M.O, Tereshchenkov, A.G, Karakchieva, A.O, Lukianov, D.A, Komarova, E.S, Tupikin, A.E, Skvortsov, D.A, Tevyashova, A.N, Tikhomirov, A.S, Tashlitsky, V.N, Kabilov, M.R, Shchekotikhin, A.E, Dontsova, O.A, Sergiev, P.V, Polikanov, Y.S.
Deposit date:2026-02-01
Release date:2026-03-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Benzoxaborole-modified azithromycins inhibit translation without inducing ermC expression
To Be Published
10QS
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BU of 10qs by Molmil
N-Alkyl & N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable Plasma Kallikrein Inhibitors Compound 13 ((3'R)-1'-{5-amino-1-[(2S)-1,1,1-trifluorobutan-2-yl]-1H-pyrazole-4-carbonyl}-6-chloro-5-fluorospiro[[3,1]benzoxazine-4,3'-piperidin]-2(1H)-one)
Descriptor: (3'R)-1'-{5-amino-1-[(2S)-1,1,1-trifluorobutan-2-yl]-1H-pyrazole-4-carbonyl}-6-chloro-5-fluorospiro[[3,1]benzoxazine-4,3'-piperidin]-2(1H)-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Plasma kallikrein
Authors:Merchant, R.R, Chernyak, N, Lopez, J.A, Sharp, P.P, Mandal, M, He, J, Hruza, A, Rearden, P, Tatosian, D.A, Lin, K, Esmay, J, Yany, S, Cheng, A, Ellsworth, K, Piou, T, Fier, P, Hicks, J, Sinz, C, Ogowa, A.
Deposit date:2026-02-02
Release date:2026-03-11
Method:X-RAY DIFFRACTION (1.733 Å)
Cite:N-Alkyl and N-Aryl Aminopyrazole Spirocarbamates: A Two-Pronged Lead Optimization Strategy to Identify Orally Bioavailable Plasma Kallikrein Inhibitors
Acs Med.Chem.Lett., 2026
13MI
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BU of 13mi by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr12860
Descriptor: (furan-2-yl)(thiomorpholin-4-yl)methanone, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MJ
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BU of 13mj by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr13647
Descriptor: 2-fluorobenzamide, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MK
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BU of 13mk by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr12961
Descriptor: MALONATE ION, N-(2,4-difluorophenyl)-N'-methylthiourea, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13ML
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BU of 13ml by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr13431
Descriptor: MALONATE ION, N-[(pyridin-3-yl)methyl]benzenecarbothioamide, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MN
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BU of 13mn by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr12338
Descriptor: 4-(piperazin-1-yl)phenol, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MO
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BU of 13mo by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with TD1471
Descriptor: 4-acetylbenzene-1-sulfonamide, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MP
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BU of 13mp by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with TD1452
Descriptor: 3-chlorobenzene-1-sulfonamide, Papain-like protease nsp3, ZINC ION
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MR
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BU of 13mr by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr13275
Descriptor: MALONATE ION, N-(2-fluorophenyl)pyridine-3-carboxamide, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MS
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BU of 13ms by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr13952
Descriptor: 3-oxo-3-(piperidin-1-yl)propanenitrile, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MU
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BU of 13mu by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with FL0184
Descriptor: 2-methoxy-7,7-dimethyl-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MV
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BU of 13mv by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr12895
Descriptor: 1,3-dihydro-2-benzofuran-5-sulfonamide, Papain-like protease nsp3, ZINC ION
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MW
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BU of 13mw by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with PDK0219
Descriptor: (7S)-6-(5-chloropyridin-2-yl)-7-hydroxy-6,7-dihydro-5H-pyrrolo[3,4-b]pyrazin-5-one, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MX
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BU of 13mx by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr13509
Descriptor: MALONATE ION, N-(2-methylphenyl)morpholine-4-carbothioamide, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MY
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BU of 13my by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr12362
Descriptor: 2,2-dimethyl-N-(pyridin-4-yl)propanamide, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13MZ
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BU of 13mz by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr14473
Descriptor: MALONATE ION, N-(2,4-dimethylphenyl)-N'-[(pyridin-4-yl)methyl]thiourea, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13NA
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BU of 13na by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr12973
Descriptor: 3-(1H-pyrrol-1-yl)benzene-1-carbothioamide, MALONATE ION, Papain-like protease nsp3, ...
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026
13NB
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BU of 13nb by Molmil
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with Fr14425
Descriptor: N-(2-{[(furan-2-yl)methyl]sulfanyl}ethyl)benzamide, Papain-like protease nsp3, ZINC ION
Authors:Wang, W, Huang, L, Xu, Q, Zhu, Z, Li, M, Zhou, H, Han, T, Zheng, S, Wang, Q, Yu, F.
Deposit date:2025-09-17
Release date:2026-02-18
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystallographic fragment screening discovers novel micromolar active inhibitors and druggable hotspots of SARS-CoV-2 PL pro.
Int.J.Biol.Macromol., 347, 2026

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PDB entries from 2026-03-11

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