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PDB: 26 results

6OB3
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Crystal structure of G13D-KRAS (GMPPNP-bound) in complex with GAP-related domain (GRD) of neurofibromin (NF1)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, GTPase KRas, ...
Authors:Tran, T.H, Dharmaiah, S, Simanshu, D.K.
Deposit date:2019-03-19
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:KRAS G13D sensitivity to neurofibromin-mediated GTP hydrolysis.
Proc.Natl.Acad.Sci.USA, 116, 2019
3PG7
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Crystal structure of the H. sapiens NF1 SEC-PH domain (del1750 mutant)
Descriptor: Neurofibromin, PHOSPHATIDYLETHANOLAMINE, PYROPHOSPHATE 2-
Authors:Welti, S, D'Angelo, I, Scheffzek, K.
Deposit date:2010-10-31
Release date:2010-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.189 Å)
Cite:Structural and biochemical consequences of NF1 associated nontruncating mutations in the Sec14-PH module of neurofibromin.
Hum.Mutat., 32, 2011
2D4Q
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Crystal structure of the Sec-PH domain of the human neurofibromatosis type 1 protein
Descriptor: Neurofibromin, OXTOXYNOL-10, PYROPHOSPHATE 2-
Authors:D'angelo, I, Welti, S, Bonneau, F, Scheffzek, K.
Deposit date:2005-10-22
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel bipartite phospholipid-binding module in the neurofibromatosis type 1 protein
Embo Rep., 7, 2006
1NF1
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BU of 1nf1 by Molmil
THE GAP RELATED DOMAIN OF NEUROFIBROMIN
Descriptor: PROTEIN (NEUROFIBROMIN)
Authors:Scheffzek, K, Ahmadian, M.R, Wiesmueller, L, Kabsch, W, Stege, P, Schmitz, F, Wittinghofer, A.
Deposit date:1998-07-08
Release date:1999-07-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of the GAP-related domain from neurofibromin and its implications.
EMBO J., 17, 1998
2E2X
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BU of 2e2x by Molmil
Sec14 Homology Module of Neurofibromin in complex with phosphatitylethanolamine
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Neurofibromin, PYROPHOSPHATE 2-
Authors:D'Angelo, I, Welti, S, Scheffzek, K.
Deposit date:2006-11-18
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The sec14 homology module of neurofibromin binds cellular glycerophospholipids: mass spectrometry and structure of a lipid complex
J.Mol.Biol., 366, 2007
3PEG
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BU of 3peg by Molmil
Crystal structure of Neurofibromins Sec14-PH module containing a patient derived duplication (TD)
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, MAGNESIUM ION, Neurofibromin, ...
Authors:Welti, S, Kuen, S, D'Angelo, I, Scheffzek, K.
Deposit date:2010-10-26
Release date:2010-12-08
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.524 Å)
Cite:Structural and biochemical consequences of NF1 associated nontruncating mutations in the Sec14-PH module of neurofibromin.
Hum.Mutat., 32, 2011
6V6F
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BU of 6v6f by Molmil
Crystal structure of Q61L KRAS(GMPPNP)-NF1(GRD)-SPRED1(EVH1) complex
Descriptor: FORMIC ACID, GTPase KRas, MAGNESIUM ION, ...
Authors:Yan, W, Simanshu, D.K.
Deposit date:2019-12-05
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.542 Å)
Cite:Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR.
Cell Rep, 32, 2020
3P7Z
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BU of 3p7z by Molmil
Crystal structure of the Neurofibromin Sec14-PH module containing the patient derived mutation I1584V
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Neurofibromin, PYROPHOSPHATE 2-, ...
Authors:Welti, S, Scheffzek, K.
Deposit date:2010-10-13
Release date:2010-12-08
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and biochemical consequences of NF1 associated nontruncating mutations in the Sec14-PH module of neurofibromin.
Hum.Mutat., 32, 2011
6V65
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BU of 6v65 by Molmil
Crystal structure of KRAS(GMPPNP)-NF1(GRD)-SPRED1 complex
Descriptor: FORMIC ACID, GTPase KRas, MAGNESIUM ION, ...
Authors:Yan, W, Simanshu, D.K.
Deposit date:2019-12-04
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.763 Å)
Cite:Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR.
Cell Rep, 32, 2020
6OB2
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BU of 6ob2 by Molmil
Crystal structure of wild-type KRAS (GMPPNP-bound) in complex with GAP-related domain (GRD) of neurofibromin (NF1)
Descriptor: CHLORIDE ION, GLYCEROL, GTPase KRas, ...
Authors:Tran, T.H, Dharmaiah, S, Simanshu, D.K.
Deposit date:2019-03-19
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.845 Å)
Cite:KRAS G13D sensitivity to neurofibromin-mediated GTP hydrolysis.
Proc.Natl.Acad.Sci.USA, 116, 2019
7PGP
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BU of 7pgp by Molmil
The core structure of human neurofibromin isoform 2
Descriptor: Neurofibromin
Authors:Naschberger, A, Baradaran, R, Carroni, M, Rupp, B.
Deposit date:2021-08-15
Release date:2022-08-24
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of neurofibromin isoform 2 reveals different functional states.
Nature, 599, 2021
7PGU
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BU of 7pgu by Molmil
Autoinhibited structure of human neurofibromin isoform 2 stabilized by Zinc.
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Neurofibromin, ZINC ION
Authors:Naschberger, A, Baradaran, R, Carroni, M, Rupp, B.
Deposit date:2021-08-15
Release date:2021-11-17
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structure of neurofibromin isoform 2 reveals different functional states.
Nature, 599, 2021
7PGS
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BU of 7pgs by Molmil
Consensus structure of human Neurofibromin isoform 2
Descriptor: Neurofibromin, ZINC ION
Authors:Naschberger, A, Baradaran, R, Carroni, M, Rupp, B.
Deposit date:2021-08-15
Release date:2021-11-17
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structure of neurofibromin isoform 2 reveals different functional states.
Nature, 599, 2021
8EDO
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BU of 8edo by Molmil
Cryo-EM structure of the full-length human NF1 dimer
Descriptor: Neurofibromin
Authors:Darling, J.E, Merk, A, Grisshammer, R, Ognjenovic, J.
Deposit date:2022-09-05
Release date:2023-09-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of the full-length human NF1 dimer
To Be Published
7PGQ
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BU of 7pgq by Molmil
GAP-SecPH region of human neurofibromin isoform 2 in closed conformation.
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Neurofibromin, ZINC ION
Authors:Naschberger, A, Baradaran, R, Carroni, M, Rupp, B.
Deposit date:2021-08-15
Release date:2022-10-26
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The structure of neurofibromin isoform 2 reveals different functional states.
Nature, 599, 2021
7R03
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BU of 7r03 by Molmil
Neurofibromin occluded conformation
Descriptor: Isoform I of Neurofibromin
Authors:Chaker-Margot, M, Scheffzek, K, Maier, T.
Deposit date:2022-02-01
Release date:2022-03-30
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of activation of the tumor suppressor protein neurofibromin.
Mol.Cell, 82, 2022
8E20
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BU of 8e20 by Molmil
Cryo-EM structure of the full-length human NF1 dimer
Descriptor: Isoform I of Neurofibromin
Authors:Darling, J.E, Merk, A, Grisshammer, R, Ognjenovic, J.
Deposit date:2022-08-12
Release date:2023-04-26
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Destabilizing NF1 variants act in a dominant negative manner through neurofibromin dimerization.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EDM
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BU of 8edm by Molmil
Cryo-EM structure of the full-length human NF1 dimer
Descriptor: Isoform I of Neurofibromin
Authors:Darling, J.E, Merk, A, Grisshammer, R, Ognjenovic, J.
Deposit date:2022-09-05
Release date:2023-09-27
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Destabilizing NF1 variants act in a dominant negative manner through neurofibromin dimerization.
Proc.Natl.Acad.Sci.USA, 120, 2023
7R04
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BU of 7r04 by Molmil
Neurofibromin in open conformation
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Isoform I of Neurofibromin
Authors:Chaker-Margot, M, Scheffzek, K, Maier, T.
Deposit date:2022-02-01
Release date:2022-03-30
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of activation of the tumor suppressor protein neurofibromin.
Mol.Cell, 82, 2022
8EDL
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BU of 8edl by Molmil
Cryo-EM structure of the full-length human NF1 dimer
Descriptor: Isoform I of Neurofibromin
Authors:Darling, J.E, Merk, A, Grisshammer, R, Ognjenovic, J.
Deposit date:2022-09-05
Release date:2023-09-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the full-length human NF1 dimer
To Be Published
8EDN
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BU of 8edn by Molmil
Cryo-EM structure of the full-length human NF1 dimer
Descriptor: Isoform I of Neurofibromin
Authors:Darling, J.E, Merk, A, Grisshammer, R, Ognjenovic, J.
Deposit date:2022-09-05
Release date:2023-09-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of the full-length human NF1 dimer
To Be Published
7PGR
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BU of 7pgr by Molmil
The structure of human neurofibromin isoform 2 in closed conformation
Descriptor: Neurofibromin, ZINC ION
Authors:Naschberger, A, Baradaran, R, Carroni, M, Rupp, B.
Deposit date:2021-08-15
Release date:2021-11-17
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The structure of neurofibromin isoform 2 reveals different functional states.
Nature, 599, 2021
7MOC
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BU of 7moc by Molmil
Neurofibromin core
Descriptor: Isoform I of Neurofibromin
Authors:Lupton, C.J, Bayly-Jones, C, Ellisdon, A.M.
Deposit date:2021-05-01
Release date:2021-12-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.56 Å)
Cite:The cryo-EM structure of the human neurofibromin dimer reveals the molecular basis for neurofibromatosis type 1.
Nat.Struct.Mol.Biol., 28, 2021
7PGT
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BU of 7pgt by Molmil
The structure of human neurofibromin isoform 2 in opened conformation.
Descriptor: Neurofibromin, ZINC ION
Authors:Naschberger, A, Baradaran, R, Carroni, M, Rupp, B.
Deposit date:2021-08-15
Release date:2021-11-17
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:The structure of neurofibromin isoform 2 reveals different functional states.
Nature, 599, 2021
7MP5
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BU of 7mp5 by Molmil
Autoinhibited neurofibrobmin
Descriptor: Isoform I of Neurofibromin
Authors:Lupton, C.J, Bayly-Jones, C, Ellisdon, A.M.
Deposit date:2021-05-04
Release date:2021-12-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:The cryo-EM structure of the human neurofibromin dimer reveals the molecular basis for neurofibromatosis type 1.
Nat.Struct.Mol.Biol., 28, 2021

 

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