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PDB: 91 results
3KV0
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BU of 3kv0 by Molmil
Crystal structure of HET-C2: A FUNGAL GLYCOLIPID TRANSFER PROTEIN (GLTP)
Descriptor: HET-C2
Authors:Simanshu, D.K, Kenoth, R, Brown, R.E, Patel, D.J.
Deposit date:2009-11-28
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural determination and tryptophan fluorescence of heterokaryon incompatibility C2 protein (HET-C2), a fungal glycolipid transfer protein (GLTP), provide novel insights into glycolipid specificity and membrane interaction by the GLTP fold.
J.Biol.Chem., 285, 2010
4E8U
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BU of 4e8u by Molmil
Crystal structure of Arabidopsis IDN2 XS domain along with a small segment of adjacent coiled-coil region
Descriptor: Putative uncharacterized protein T8P19.180, SULFATE ION
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2012-03-20
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 109, 2012
2E1Z
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BU of 2e1z by Molmil
Crystal structure of Salmonella typhimurium propionate kinase (TdcD) in complex with diadenosine tetraphosphate (Ap4A) obtained after co-crystallization with ATP
Descriptor: 1,2-ETHANEDIOL, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Propionate Kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
2E20
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BU of 2e20 by Molmil
Crystal structure of Salmonella typhimurium propionate kinase (TdcD) in complex with diadenosine tetraphosphate (Ap4A)
Descriptor: 1,2-ETHANEDIOL, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Propionate Kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
2E1Y
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BU of 2e1y by Molmil
Crystal structure of propionate kinase (TdcD) from Salmonella typhimurium
Descriptor: Propionate kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
1O5Q
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BU of 1o5q by Molmil
Crystal Structure of Pyruvate and Mg2+ bound 2-methylisocitrate lyase (PrpB) from Salmonella typhimurium
Descriptor: MAGNESIUM ION, PYRUVIC ACID, Probable methylisocitrate lyase
Authors:Simanshu, D.K, Murthy, M.R.N.
Deposit date:2003-10-04
Release date:2003-11-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Salmonella typhimurium 2-methylisocitrate lyase (PrpB) and its complex with pyruvate and Mg(2+)
Biochem.Biophys.Res.Commun., 311, 2003
2GN2
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BU of 2gn2 by Molmil
Crystal structure of tetrameric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium in complex with CMP at 2.5A resolution (Hexagonal form)
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, SODIUM ION, Threonine dehydratase catabolic
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-04-09
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
2GN1
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BU of 2gn1 by Molmil
Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 2.2A resolution (Triclinic form with one dimer of TdcB in the asymmetric unit)
Descriptor: SODIUM ION, Threonine dehydratase catabolic
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-04-09
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
2GN0
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BU of 2gn0 by Molmil
Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 1.7 A resolution (Triclinic form with one complete subunit built in alternate conformation)
Descriptor: SODIUM ION, Threonine dehydratase catabolic
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.
Deposit date:2006-04-09
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
1UJQ
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BU of 1ujq by Molmil
Crystal structure of 2-methylisocitrate lyase (PrpB) from Salmonella enterica serovar typhimurium
Descriptor: Probable methylisocitrate lyase
Authors:Simanshu, D.K, Murthy, M.R.N.
Deposit date:2003-08-11
Release date:2003-09-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Salmonella typhimurium 2-methylisocitrate lyase (PrpB) and its complex with pyruvate and Mg(2+)
Biochem.Biophys.Res.Commun., 311, 2003
1X3M
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BU of 1x3m by Molmil
Crystal structure of ADP bound Propionate kinase (TdcD) from Salmonella typhimurium
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Propionate kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.
Deposit date:2005-05-09
Release date:2005-09-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of ADP and AMPPNP-bound Propionate Kinase (TdcD) from Salmonella typhimurium: Comparison with Members of Acetate and Sugar Kinase/Heat Shock Cognate 70/Actin Superfamily.
J.Mol.Biol., 352, 2005
1X3N
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BU of 1x3n by Molmil
Crystal structure of AMPPNP bound Propionate kinase (TdcD) from Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Propionate kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.
Deposit date:2005-05-10
Release date:2005-09-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of ADP and AMPPNP-bound Propionate Kinase (TdcD) from Salmonella typhimurium: Comparison with Members of Acetate and Sugar Kinase/Heat Shock Cognate 70/Actin Superfamily.
J.Mol.Biol., 352, 2005
4K80
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BU of 4k80 by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 2:0 ceramide-1-phosphate (2:0-C1P)
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-17
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4KBR
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BU of 4kbr by Molmil
Crystal structure of mouse Ceramide-1-phosphate transfer protein (apo-form)
Descriptor: Glycolipid transfer protein domain-containing protein 1, PHOSPHATE ION
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-23
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.547 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4K84
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BU of 4k84 by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 16:0 ceramide-1-phosphate (16:0-C1P)
Descriptor: (2S,3R,4E)-2-(hexadecanoylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-17
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4KBS
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BU of 4kbs by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 12:0 phosphatidic acid (12:0 PA)
Descriptor: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-ETHANEDIOL, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-23
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4KF6
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BU of 4kf6 by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 8:0 Ceramide-1-Phosphate (8:0-C1P)
Descriptor: (2S,3R,4E)-3-hydroxy-2-(octanoylamino)octadec-4-en-1-yl dihydrogen phosphate, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-26
Release date:2013-07-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.195 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4K85
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BU of 4k85 by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 12:0 Ceramide-1-Phosphate (12:0-C1P)
Descriptor: (2S,3R,4E)-2-(dodecanoylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-17
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4K8N
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BU of 4k8n by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 18:1 Ceramide-1-Phosphate (18:1-C1P)
Descriptor: (2S,3R,4Z)-3-hydroxy-2-[(9E)-octadec-9-enoylamino]octadec-4-en-1-yl dihydrogen phosphate, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-18
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
4ME7
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BU of 4me7 by Molmil
Crystal structure of Bacillus subtilis toxin MazF in complex with cognate antitoxin MazE
Descriptor: Antitoxin EndoAI, mRNA interferase EndoA
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2013-08-25
Release date:2013-10-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.918 Å)
Cite:Structural Basis of mRNA Recognition and Cleavage by Toxin MazF and Its Regulation by Antitoxin MazE in Bacillus subtilis.
Mol.Cell, 52, 2013
4MDX
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BU of 4mdx by Molmil
Crystal structure of Bacillus subtilis MazF in complex with RNA
Descriptor: IODIDE ION, RNA, mRNA, ...
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2013-08-23
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis of mRNA Recognition and Cleavage by Toxin MazF and Its Regulation by Antitoxin MazE in Bacillus subtilis.
Mol.Cell, 52, 2013
4NHA
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BU of 4nha by Molmil
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 16-mer siRNA having 5'-p and UU-3' ends (3.4 Angstrom resolution)
Descriptor: 5'-R(P*GP*CP*GP*UP*UP*GP*GP*CP*CP*AP*AP*CP*GP*CP*UP*U)-3', Endoribonuclease Dicer
Authors:Simanshu, D.K, Tian, Y, Ma, J.-B, Patel, D.J.
Deposit date:2013-11-04
Release date:2014-03-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
4NGC
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BU of 4ngc by Molmil
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having UA-3' ends (2.1 Angstrom resolution)
Descriptor: 5'-R(*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*A)-3', Endoribonuclease Dicer
Authors:Simanshu, D.K, Tian, Y, Patel, D.J.
Deposit date:2013-11-01
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
4NGG
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BU of 4ngg by Molmil
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 13-mer siRNA having 5'-A and UU-3' ends (2.6 Angstrom resolution)
Descriptor: 5'-R(*AP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', Endoribonuclease Dicer, PHOSPHATE ION
Authors:Simanshu, D.K, Tian, Y, Patel, D.J.
Deposit date:2013-11-01
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
4NH6
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BU of 4nh6 by Molmil
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 15-mer siRNA having 5'-pUUU and UU-3' ends (2.55 Angstrom resolution)
Descriptor: 5'-R(P*UP*UP*UP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', Endoribonuclease Dicer
Authors:Simanshu, D.K, Tian, Y, Patel, D.J.
Deposit date:2013-11-04
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014

 

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