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PDB: 64 results

6OE9
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BU of 6oe9 by Molmil
Crystal structure of p204 HIN1 domain
Descriptor: GLYCEROL, Interferon-activable protein 204, SULFATE ION
Authors:Tian, Y, Yin, Q.
Deposit date:2019-03-27
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural analysis of the HIN1 domain of interferon-inducible protein 204.
Acta Crystallogr.,Sect.F, 75, 2019
7SA4
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BU of 7sa4 by Molmil
Damaged 70S ribosome with PrfH bound
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Tian, Y, Zeng, F, Raybarman, A, Carruthers, A, Li, Q, Fatma, S, Huang, R.H.
Deposit date:2021-09-22
Release date:2022-08-03
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Sequential rescue and repair of stalled and damaged ribosome by bacterial PrfH and RtcB.
Proc.Natl.Acad.Sci.USA, 119, 2022
3RIU
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BU of 3riu by Molmil
Crystal structure of Drosophila hexameric C3PO formed by truncated Translin and Trax
Descriptor: Translin, Translin associated factor X, isoform B
Authors:Tian, Y, Simanshu, D.K, Patel, D.J.
Deposit date:2011-04-14
Release date:2011-05-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Multimeric assembly and biochemical characterization of the Trax-translin endonuclease complex.
Nat.Struct.Mol.Biol., 18, 2011
3O7X
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BU of 3o7x by Molmil
Crystal structure of human Hili PAZ domain
Descriptor: Piwi-like protein 2
Authors:Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
Deposit date:2010-08-01
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9248 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O3I
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BU of 3o3i by Molmil
Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OH at its 3'-end
Descriptor: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*U)-3')
Authors:Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
Deposit date:2010-07-24
Release date:2011-01-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O6E
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BU of 3o6e by Molmil
Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end
Descriptor: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3')
Authors:Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
Deposit date:2010-07-28
Release date:2011-01-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.904 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O7V
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BU of 3o7v by Molmil
Crystal Structure of human Hiwi1 (V361M) PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end
Descriptor: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3')
Authors:Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
Deposit date:2010-08-01
Release date:2011-01-12
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
7TWD
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BU of 7twd by Molmil
Structure of AAGAB C-terminal dimerization domain
Descriptor: Alpha- and gamma-adaptin-binding protein p34, PHOSPHATE ION
Authors:Tian, Y, Yin, Q.
Deposit date:2022-02-07
Release date:2023-01-18
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Oligomer-to-monomer transition underlies the chaperone function of AAGAB in AP1/AP2 assembly.
Proc.Natl.Acad.Sci.USA, 120, 2023
7ESH
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BU of 7esh by Molmil
Crystal structure of amylosucrase from Calidithermus timidus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, amylosucrase
Authors:Tian, Y, Hou, X, Ni, D, Xu, W, Guang, C, Zhang, W, Rao, Y, Mu, W.
Deposit date:2021-05-10
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure-based interface engineering methodology in designing a thermostable amylose-forming transglucosylase
J.Biol.Chem., 298, 2022
4OJX
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BU of 4ojx by Molmil
crystal structure of yeast phosphodiesterase-1 in complex with GMP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3',5'-cyclic-nucleotide phosphodiesterase 1, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Tian, Y, Cui, W, Huang, M, Robinson, H, Wan, Y, Wang, Y, Ke, H.
Deposit date:2014-01-21
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Dual specificity and novel structural folding of yeast phosphodiesterase-1 for hydrolysis of second messengers cyclic adenosine and guanosine 3',5'-monophosphate.
Biochemistry, 53, 2014
4OJV
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Crystal structure of unliganded yeast PDE1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3',5'-cyclic-nucleotide phosphodiesterase 1, SULFATE ION, ...
Authors:Tian, Y, Cui, W, Huang, M, Robinson, H, Wan, Y, Wang, Y, Ke, H.
Deposit date:2014-01-21
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Dual specificity and novel structural folding of yeast phosphodiesterase-1 for hydrolysis of second messengers cyclic adenosine and guanosine 3',5'-monophosphate.
Biochemistry, 53, 2014
4NGD
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BU of 4ngd by Molmil
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having 5'-p and UU-3' ends (1.95 Angstrom resolution)
Descriptor: 5'-R(P*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', DI(HYDROXYETHYL)ETHER, Endoribonuclease Dicer, ...
Authors:Tian, Y, Simanshu, D.K, Patel, D.J.
Deposit date:2013-11-01
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.958 Å)
Cite:A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
4NH5
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BU of 4nh5 by Molmil
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 14-mer siRNA having 5'-pUU and UU-3' ends (2.55 Angstrom resolution)
Descriptor: 5'-R(P*UP*UP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', Endoribonuclease Dicer
Authors:Tian, Y, Simanshu, D.K, Patel, D.J.
Deposit date:2013-11-04
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
2MOZ
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BU of 2moz by Molmil
Structure of the Membrane Protein MerF, a Bacterial Mercury Transporter, Improved by the Inclusion of Chemical Shift Anisotropy Constraints
Descriptor: MerF
Authors:Tian, Y, Lu, G.J, Marassi, F.M, Opella, S.J, Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2014-05-07
Release date:2014-07-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the membrane protein MerF, a bacterial mercury transporter, improved by the inclusion of chemical shift anisotropy constraints.
J.Biomol.Nmr, 60, 2014
6NZN
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BU of 6nzn by Molmil
Dimer-of-dimer amyloid fibril structure of glucagon
Descriptor: Glucagon
Authors:Gelenter, M.D, Smith, K.J, Liao, S.Y, Mandala, V.S, Dregni, A.J, Lamm, M.S, Tian, Y, Wei, X, Pochan, D.J, Tucker, T.J, Su, Y, Hong, M.
Deposit date:2019-02-14
Release date:2019-06-05
Last modified:2023-06-14
Method:SOLID-STATE NMR
Cite:The peptide hormone glucagon forms amyloid fibrils with two coexisting beta-strand conformations.
Nat.Struct.Mol.Biol., 26, 2019
6NOV
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BU of 6nov by Molmil
A Fab derived from ixekizumab
Descriptor: DODECAETHYLENE GLYCOL, Fab Heavy Chain, Fab Light Chain
Authors:Durbin, J.D, Clawson, D.K, Lu, F, Tian, Y, Lu, J, Schmitt, M, Atwell, S.
Deposit date:2019-01-16
Release date:2019-06-19
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Development of tibulizumab, a tetravalent bispecific antibody targeting BAFF and IL-17A for the treatment of autoimmune disease.
Mabs, 11, 2019
6NOU
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BU of 6nou by Molmil
An scFv derived from ixekizumab
Descriptor: GLYCEROL, scFv derived from ixekizumab
Authors:Durbin, J.D, Clawson, D.K, Lu, F, Tian, Y, Lu, J, Atwell, S.
Deposit date:2019-01-16
Release date:2019-06-19
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.914 Å)
Cite:Development of tibulizumab, a tetravalent bispecific antibody targeting BAFF and IL-17A for the treatment of autoimmune disease.
Mabs, 11, 2019
6X7I
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BU of 6x7i by Molmil
Structure of the C-terminal domain of BCL-XL in membrane
Descriptor: Bcl-2-like protein 1
Authors:Yao, Y, Tian, Y, Marassi, F.M.
Deposit date:2020-05-30
Release date:2020-07-01
Last modified:2023-06-14
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:Conformational States of the Cytoprotective Protein Bcl-xL.
Biophys.J., 119, 2020
7S0N
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BU of 7s0n by Molmil
Structure of MS3494 from Mycobacterium Smegmatis determined by Solution NMR
Descriptor: Secreted protein
Authors:Kent, J.E, Tian, Y, Shin, K, Zhang, L, Niederweis, M, Marassi, F.M.
Deposit date:2021-08-30
Release date:2021-10-06
Method:SOLUTION NMR
Cite:Structure of MS3494 from Mycobacterium Smegmatis
To Be Published
7M1S
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BU of 7m1s by Molmil
Crystal structure of human guanylate-binding protein 2 (hGBP2) K51A mutant
Descriptor: Guanylate-binding protein 2, PHOSPHATE ION
Authors:Roy, S, Wang, B, Tian, Y, Yin, Q.
Deposit date:2021-03-15
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of human guanylate-binding protein 2 (hGBP2) K51A mutant
To Be Published
4WQN
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BU of 4wqn by Molmil
Crystal structure of N6-methyladenosine RNA reader YTHDF2
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, YTH domain-containing family protein 2
Authors:Zhu, T, Roundtree, I.A, Wang, P, Wang, X, Wang, L, Sun, C, Tian, Y, Li, J, He, C, Xu, Y.
Deposit date:2014-10-22
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.121 Å)
Cite:Crystal structure of the YTH domain of YTHDF2 reveals mechanism for recognition of N6-methyladenosine.
Cell Res., 24, 2014
4YCG
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BU of 4ycg by Molmil
Pro-bone morphogenetic protein 9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bone Morphogenetic Protein 9 Growth Factor Domain, Bone Morphogenetic Protein 9 Prodomain, ...
Authors:Mi, L.-Z, Brown, C.T, Gao, Y, Tian, Y, Le, V, Walz, T, Springer, T.A.
Deposit date:2015-02-20
Release date:2015-03-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of bone morphogenetic protein 9 procomplex.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YCI
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BU of 4yci by Molmil
non-latent pro-bone morphogenetic protein 9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bone Morphogenetic Protein 9 Growth Factor Domain, ...
Authors:Mi, L.Z, Brown, C.T, Gao, Y, Tian, Y, Le, V, Walz, T, Springer, T.A.
Deposit date:2015-02-20
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure of bone morphogenetic protein 9 procomplex.
Proc.Natl.Acad.Sci.USA, 112, 2015
6VKJ
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BU of 6vkj by Molmil
Crystal structure of the G domain of human guanylate-binding protein 2 (hGBP2) in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanylate-binding protein 2
Authors:Roy, S, Wang, B, Tian, Y, Yin, Q.
Deposit date:2020-01-21
Release date:2021-01-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Crystal structure of the G domain of human guanylate-binding protein 2 (hGBP2) in complex with GDP
To Be Published
7FI6
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BU of 7fi6 by Molmil
Crystal structure of human MICA mutants in complex with natural killer cell receptor NKG2D
Descriptor: MHC class I polypeptide-related sequence A, NKG2-D type II integral membrane protein
Authors:Cai, W, Peng, S, Xu, T, Tian, Y, Li, Y, Liu, J.
Deposit date:2021-07-30
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of human MICA mutants in complex with natural killer cell receptor NKG2D
to be published

 

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