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Mine: Large structure entries

4V4M
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1.45 ANGSTROM STRUCTURE OF STNV COAT PROTEIN
Descriptor:Coat protein
Authors:Lane, S.W., Dennis, C.A., Lane, C.L., Trinh, C.H., Rizkallah, P.J., Stockley, P.G., Phillips, S.E.V.
Deposit date:2011-04-28
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Construction and crystal structure of recombinant STNV capsids.
J.Mol.Biol., 413, 2011
4V4F
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THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A RNA MOLECULE CONTAINING UAGAU REPEATS
Descriptor:trp RNA-binding protein/RNA complex
Authors:Hopcroft, N.H., Manfredo, A., Wendt, A.L., Brzozowski, A.M., Gollnick, P., Antson, A.A.
Deposit date:2003-12-08
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Interaction of RNA with Trap: The Role of Triplet Repeats and Separating Spacer Nucleotides
J.Mol.Biol., 338, 2004
4V4E
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CRYSTAL STRUCTURE OF PYROGALLOL-PHLOROGLUCINOL TRANSHYDROXYLASE FROM PELOBACTER ACIDIGALLICI COMPLEXED WITH INHIBITOR 1,2,4,5-TETRAHYDROXY-BENZENE
Descriptor:Pyrogallol hydroxytransferase large subunit (E.C.1.97.1.2), Pyrogallol hydroxytransferase small subunit (E.C.1.97.1.2)
Authors:Messerschmidt, A., Niessen, H., Abt, D., Einsle, O., Schink, B., Kroneck, P.M.H.
Deposit date:2004-06-02
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of pyrogallol-phloroglucinol transhydroxylase, an Mo enzyme capable of intermolecular hydroxyl transfer between phenols
PROC.NATL.ACAD.SCI.USA, 101, 2004
4YBB
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HIGH-RESOLUTION STRUCTURE OF THE ESCHERICHIA COLI RIBOSOME
Descriptor:Ribosome
Authors:Noeske, J., Wasserman, M.R., Terry, D.S., Altman, R.B., Blanchard, S.C., Cate, J.H.D.
Deposit date:2015-02-18
Release date:2015-03-18
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution structure of the Escherichia coli ribosome.
Nat.Struct.Mol.Biol., 22, 2015
5EUJ
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PYRUVATE DECARBOXYLASE FROM ZYMOBACTER PALMAE
Descriptor:Pyruvate decarboxylase (E.C.4.1.1.1)
Authors:BUDDRUS, L., CRENNELL, S., LEAK, D.J., DANSON, M.J., ANDREWS, E.S.V., ARCUS, V.L.
Deposit date:2015-11-18
Release date:2016-09-14
Last modified:2016-09-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of pyruvate decarboxylase from Zymobacter palmae.
Acta Crystallogr.,Sect.F, 72, 2016
4V4D
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CRYSTAL STRUCTURE OF PYROGALLOL-PHLOROGLUCINOL TRANSHYDROXYLASE FROM PELOBACTER ACIDIGALLICI COMPLEXED WITH PYROGALLOL
Descriptor:Pyrogallol hydroxytransferase large subunit (E.C.1.97.1.2), Pyrogallol hydroxytransferase small subunit (E.C.1.97.1.2)
Authors:Messerschmidt, A., Niessen, H., Abt, D., Einsle, O., Schink, B., Kroneck, P.M.H.
Deposit date:2004-06-02
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of pyrogallol-phloroglucinol transhydroxylase, an Mo enzyme capable of intermolecular hydroxyl transfer between phenols
PROC.NATL.ACAD.SCI.USA, 101, 2004
4Y4O
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME WITH RRNA MODIFICATIONS AND BOUND TO PROTEIN Y (YFIA) AT 2.3A RESOLUTION
Descriptor:50S Ribosomal Protein L2, 50S Ribosomal Protein L3, 50S Ribosomal Protein L4, 50S Ribosomal Protein L5, 50S Ribosomal Protein L6, 50S Ribosomal Protein L9, 50S Ribosomal Protein L13, 50S Ribosomal Protein L14, 50S Ribosomal Protein L15, 50S Ribosomal Protein L16, 50S Ribosomal Protein L17, 50S Ribosomal Protein L18, 50S Ribosomal Protein L19, 50S Ribosomal Protein L20, 50S Ribosomal Protein L21, 50S Ribosomal Protein L22, 50S Ribosomal Protein L23, 50S Ribosomal Protein L24, 50S Ribosomal Protein L25, 50S Ribosomal Protein L27, 50S Ribosomal Protein L28, 50S Ribosomal Protein L29, 50S Ribosomal Protein L30, 50S Ribosomal Protein L31, 50S Ribosomal Protein L32, 50S Ribosomal Protein L33, 50S Ribosomal Protein L34, 50S Ribosomal Protein L35, 50S Ribosomal Protein L36, 30S Ribosomal Protein S2, 30S Ribosomal Protein S3, 30S Ribosomal Protein S4, 30S Ribosomal Protein S5, 30S Ribosomal Protein S6, 30S Ribosomal Protein S7, 30S Ribosomal Protein S8, 30S Ribosomal Protein S9, 30S Ribosomal Protein S10, 30S Ribosomal Protein S11, 30S Ribosomal Protein S12, 30S Ribosomal Protein S13, 30S Ribosomal Protein S14, 30S Ribosomal Protein S15, 30S Ribosomal Protein S16, 30S Ribosomal Protein S17, 30S Ribosomal Protein S18, 30S Ribosomal Protein S19, 30S Ribosomal Protein S20, 30S Ribosomal Protein THX, Protein Y/RNA Complex
Authors:Polikanov, Y.S., Melnikov, S.V., Soll, D., Steitz, T.A.
Deposit date:2015-02-10
Release date:2015-03-18
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Nat.Struct.Mol.Biol., 22, 2015
4V7N
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GLYCOCYAMINE KINASE, BETA-BETA HOMODIMER FROM MARINE WORM NAMALYCASTIS SP., WITH TRANSITION STATE ANALOG MG(II)-ADP-NO3-GLYCOCYAMINE.
Descriptor:Glycocyamine kinase beta chain (E.C.2.7.3.1)
Authors:Lim, K., Pullalarevu, S., Herzberg, O.
Deposit date:2009-12-15
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member.
Biochemistry, 49, 2010
4V4C
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CRYSTAL STRUCTURE OF PYROGALLOL-PHLOROGLUCINOL TRANSHYDROXYLASE FROM PELOBACTER ACIDIGALLICI
Descriptor:Pyrogallol hydroxytransferase large subunit (E.C.1.97.1.2), Pyrogallol hydroxytransferase small subunit (E.C.1.97.1.2)
Authors:Messerschmidt, A., Niessen, H., Abt, D., Einsle, O., Schink, B., Kroneck, P.M.H.
Deposit date:2004-06-02
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of pyrogallol-phloroglucinol transhydroxylase, an Mo enzyme capable of intermolecular hydroxyl transfer between phenols
PROC.NATL.ACAD.SCI.USA, 101, 2004
4W2F
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH AMICOUMACIN, MRNA AND THREE DEACYLATED TRNAS IN THE A, P AND E SITES
Descriptor:PROTEIN/RNA Complex
Authors:Polikanov, Y.S., Osterman, I.A., Szal, T., Tashlitsky, V.N., Serebryakova, M.V., Kusochek, P., Bulkley, D., Malanicheva, I.A., Efimenko, T.A., Efremenkova, O.V., Konevega, A.L., Shaw, K.J., Bogdanov, A.A., Rodnina, M.V., Dontsova, O.A., Mankin, A.S., Steitz, T.A., Sergiev, P.V.
Deposit date:2014-09-12
Release date:2014-10-15
Last modified:2015-01-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome.
Mol.Cell, 56, 2014
4V9F
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THE RE-REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION: MORE COMPLETE STRUCTURE OF THE L7/L12 AND L1 STALK, L5 AND LX PROTEINS
Descriptor:PROTEIN/RNA Complex
Authors:Gabdulkhakov, A.
Deposit date:2012-11-02
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:Revisiting the Haloarcula marismortui 50S ribosomal subunit model.
Acta Crystallogr.,Sect.D, 69, 2013
4V40
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BETA-GALACTOSIDASE
Descriptor:BETA-GALACTOSIDASE
Authors:Jacobson, R.H., Zhang, X., Dubose, R.F., Matthews, B.W.
Deposit date:1994-07-18
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of beta-galactosidase from E. coli.
Nature, 369, 1994
4V41
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E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC)
Descriptor:BETA-GALACTOSIDASE (E.C.3.2.1.23)
Authors:Juers, D.H., Jacobson, R.H., Wigley, D., Zhang, X.J., Huber, R.E., Tronrud, D.E., Matthews, B.W.
Deposit date:2000-06-07
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
4Y4P
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME WITH RRNA MODIFICATIONS AND BOUND TO MRNA AND A-, P- AND E-SITE TRNAS AT 2.5A RESOLUTION
Descriptor:50S Ribosomal Protein L2, 50S Ribosomal Protein L3, 50S Ribosomal Protein L4, 50S Ribosomal Protein L5, 50S Ribosomal Protein L6, 50S Ribosomal Protein L9, 50S Ribosomal Protein L13, 50S Ribosomal Protein L14, 50S Ribosomal Protein L15, 50S Ribosomal Protein L16, 50S Ribosomal Protein L17, 50S Ribosomal Protein L18, 50S Ribosomal Protein L19, 50S Ribosomal Protein L20, 50S Ribosomal Protein L21, 50S Ribosomal Protein L22, 50S Ribosomal Protein L23, 50S Ribosomal Protein L24, 50S Ribosomal Protein L25, 50S Ribosomal Protein L27, 50S Ribosomal Protein L28, 50S Ribosomal Protein L29, 50S Ribosomal Protein L30, 50S Ribosomal Protein L31, 50S Ribosomal Protein L32, 50S Ribosomal Protein L33, 50S Ribosomal Protein L34, 50S Ribosomal Protein L35, 50S Ribosomal Protein L36, 30S Ribosomal Protein S2, 30S Ribosomal Protein S3, 30S Ribosomal Protein S4, 30S Ribosomal Protein S5, 30S Ribosomal Protein S6, 30S Ribosomal Protein S7, 30S Ribosomal Protein S8, 30S Ribosomal Protein S9, 30S Ribosomal Protein S10, 30S Ribosomal Protein S11, 30S Ribosomal Protein S12, 30S Ribosomal Protein S13, 30S Ribosomal Protein S14, 30S Ribosomal Protein S15, 30S Ribosomal Protein S16, 30S Ribosomal Protein S17, 30S Ribosomal Protein S18, 30S Ribosomal Protein S19, 30S Ribosomal Protein S20, 30S Ribosomal Protein THX/RNA Complex
Authors:Polikanov, Y.S., Melnikov, S.V., Soll, D., Steitz, T.A.
Deposit date:2015-02-10
Release date:2015-03-18
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Nat.Struct.Mol.Biol., 22, 2015
5T5H
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STRUCTURE AND ASSEMBLY MODEL FOR THE TRYPANOSOMA CRUZI 60S RIBOSOMAL SUBUNIT
Descriptor:PROTEIN/RNA Complex
Authors:Liu, Z., Gutierrez-Vargas, C., Wei, J., Grassucci, R.A., Ramesh, M., Espina, N., Sun, M., Tutuncuoglu, B., Madison-Antenucci, S., Woolford Jr., J.L., Tong, L., Frank, J.
Deposit date:2016-08-31
Release date:2016-10-12
Last modified:2016-11-16
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit.
Proc.Natl.Acad.Sci.USA, 113, 2016
5T61
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TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, TRICLINIC FORM AT 2.55 A
Descriptor:Tungsten formylmethanofuran dehydrogenase subunit fwdA, Tungsten formylmethanofuran dehydrogenase subunit B, Tungsten-containing formylmethanofuran dehydrogenase 2 subunit C (E.C.1.2.99.5), Tungsten formylmethanofuran dehydrogenase subunit fwdD, Tungsten formylmethanofuran dehydrogenase subunit fwdG, Tungsten formylmethanofuran dehydrogenase subunit fwdF
Authors:Wagner, T., Ermler, U., Shima, S.
Deposit date:2016-09-01
Release date:2016-10-19
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
Science, 354, 2016
4W2G
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH PACTAMYCIN (SOAKED), MRNA AND THREE DEACYLATED TRNAS IN THE A, P AND E SITES
Descriptor:PROTEIN/RNA Complex
Authors:Polikanov, Y.S., Osterman, I.A., Szal, T., Tashlitsky, V.N., Serebryakova, M.V., Kusochek, P., Bulkley, D., Malanicheva, I.A., Efimenko, T.A., Efremenkova, O.V., Konevega, A.L., Shaw, K.J., Bogdanov, A.A., Rodnina, M.V., Dontsova, O.A., Mankin, A.S., Steitz, T.A., Sergiev, P.V.
Deposit date:2014-09-12
Release date:2014-10-15
Last modified:2015-01-14
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome.
Mol.Cell, 56, 2014
1VY5
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN THE POST-CATALYSIS STATE OF PEPTIDE BOND FORMATION CONTAINING DIPEPTYDIL-TRNA IN THE A SITE AND DEACYLATED TRNA IN THE P SITE.
Descriptor:PROTEIN/RNA Complex
Authors:Polikanov, Y.S., Steitz, T.A., Innis, C.A.
Deposit date:2014-05-13
Release date:2014-08-20
Last modified:2015-01-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome.
Nat.Struct.Mol.Biol., 21, 2014
5J8B
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CRYSTAL STRUCTURE OF ELONGATION FACTOR 4 (EF-4/LEPA) IN COMPLEX WITH GDPCP BOUND TO THE THERMUS THERMOPHILUS 70S RIBOSOME
Descriptor:Ribosome
Authors:Gagnon, M.G., Lin, J., Steitz, T.A.
Deposit date:2016-04-07
Release date:2016-05-25
Last modified:2016-06-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Elongation factor 4 remodels the A-site tRNA on the ribosome.
Proc.Natl.Acad.Sci.USA, 113, 2016
4V45
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E. COLI (LACZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE
Descriptor:Beta-Galactosidase (E.C.3.2.1.23)
Authors:Juers, D.H., McCarter, J.D., Withers, S.G., Matthews, B.W.
Deposit date:2001-09-13
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
5DOY
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH ANTIBIOTIC HYGROMYCIN A, MRNA AND THREE TRNAS IN THE A, P AND E SITES AT 2.6A RESOLUTION
Descriptor:Ribosome
Authors:Polikanov, Y.S., Starosta, A.L., Juette, M.F., Altman, R.B., Terry, D.S., Lu, W., Burnett, B.J., Dinos, G., Reynolds, K., Blanchard, S.C., Steitz, T.A., Wilson, D.N.
Deposit date:2015-09-11
Release date:2015-12-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
1VY4
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN THE PRE-ATTACK STATE OF PEPTIDE BOND FORMATION CONTAINING ACYLATED TRNA-SUBSTRATES IN THE A AND P SITES.
Descriptor:PROTEIN/RNA Complex
Authors:Polikanov, Y.S., Steitz, T.A., Innis, C.A.
Deposit date:2014-05-13
Release date:2014-08-20
Last modified:2015-01-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome.
Nat.Struct.Mol.Biol., 21, 2014
5J4B
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH CISPLATIN (CO-CRYSTALLIZED) AND BOUND TO MRNA AND A-, P- AND E-SITE TRNAS AT 2.6A RESOLUTION
Descriptor:70S Ribosome
Authors:Melnikov, S.V., Soll, D., Steitz, T.A., Polikanov, Y.S.
Deposit date:2016-03-31
Release date:2016-04-27
Last modified:2016-06-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into RNA binding by the anticancer drug cisplatin from the crystal structure of cisplatin-modified ribosome.
Nucleic Acids Res., 44, 2016
4Z3S
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH ANTIBIOTIC A201A, MRNA AND THREE TRNAS IN THE A, P AND E SITES AT 2.65A RESOLUTION
Descriptor:Ribosome
Authors:Polikanov, Y.S., Starosta, A.L., Juette, M.F., Altman, R.B., Terry, D.S., Lu, W., Burnett, B.J., Dinos, G., Reynolds, K., Blanchard, S.C., Steitz, T.A., Wilson, D.N.
Deposit date:2015-03-31
Release date:2015-06-03
Last modified:2015-06-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
5HD1
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CRYSTAL STRUCTURE OF ANTIMICROBIAL PEPTIDE PYRRHOCORICIN BOUND TO THE THERMUS THERMOPHILUS 70S RIBOSOME
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14 type Z, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, Pyrrhocoricin/RNA Complex
Authors:Gagnon, M.G., Roy, R.N., Lomakin, I.B., Florin, T., Mankin, A.S., Steitz, T.A.
Deposit date:2016-01-04
Release date:2016-04-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
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