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Mine: Large structure entries

6I7O
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THE STRUCTURE OF A DI-RIBOSOME (DISOME) AS A UNIT FOR RQC AND NGD QUALITY CONTROL PATHWAYS RECOGNITION.
Descriptor:25S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Tesina, P., Cheng, J., Becker, T., Beckmann, R.
Deposit date:2018-11-16
Release date:2019-01-16
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways.
EMBO J., 2019
6DZU
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MECHANISM OF CELLULAR RECOGNITION BY PCV2
Descriptor:Putative capsid protein
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-05
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of Porcine Circovirus 2 at 3.2 Angstroms resolution
To be published
6E2R
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MECHANISM OF CELLULAR RECOGNITION BY PCV2
Descriptor:Capsid protein of PCV2
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of Porcine Circovirus 2 at 3.2 Angstroms resolution
To be published
6E2X
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MECHANISM OF CELLULAR RECOGNITION BY PCV2
Descriptor:Capsid protein of PCV2, N,O6-DISULFO-GLUCOSAMINE, 2-O-sulfo-alpha-L-idopyranuronic acid
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Porcine Circovirus 2 at 3.2 Angstroms resolution
To be published
6E2Z
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MECHANISM OF CELLULAR RECOGNITION BY PCV2
Descriptor:Capsid protein of PCV2, N,O6-DISULFO-GLUCOSAMINE, 2-O-sulfo-alpha-L-idopyranuronic acid
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of Porcine Circovirus 2 at 3.4 Angstroms resolution
To be published
6E30
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MECHANISM OF CELLULAR RECOGNITION BY PCV2
Descriptor:Capsid protein of PCV2, N,O6-DISULFO-GLUCOSAMINE, 2-O-sulfo-alpha-L-idopyranuronic acid
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Porcine Circovirus 2 at 3.5 Angstroms resolution
To be published
6E32
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CAPSID PROTEIN OF PCV2 WITH N,O6-DISULFO-GLUCOSAMINE
Descriptor:Capsid protein of PCV2, N,O6-DISULFO-GLUCOSAMINE, 2-O-sulfo-alpha-L-idopyranuronic acid
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-13
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of Porcine Circovirus 2 at 3.5 Angstroms resolution
To be published
6E34
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CAPSID PROTEIN OF PCV2 WITH N,O6-DISULFO-GLUCOSAMINE AND 2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID
Descriptor:Capsid protein of PCV2, N,O6-DISULFO-GLUCOSAMINE, 2-O-sulfo-alpha-L-idopyranuronic acid
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-13
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Porcine Circovirus 2 at 3.5 Angstroms resolution
To be published
6E39
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CAPSID PROTEIN OF PCV2 WITH 2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID AND N,O6-DISULFO-GLUCOSAMINE
Descriptor:Capsid protein of PCV2, 2-O-sulfo-alpha-L-idopyranuronic acid, N,O6-DISULFO-GLUCOSAMINE
Authors:Khayat, R., Dhindwal, S.
Deposit date:2018-07-13
Release date:2018-12-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Porcine Circovirus 2 at 3.5 Angstroms resolution
To be published
6H8K
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CRYSTAL STRUCTURE OF A VARIANT (Q133C IN PSST) OF YARROWIA LIPOLYTICA COMPLEX I
Descriptor:NADH-ubiquinone oxidoreductase chain 1, NADH-ubiquinone oxidoreductase chain 2,NADH dehydrogenase subunit 2, NADH-ubiquinone oxidoreductase chain 3, ...
Authors:Wirth, C., Galemou Yoga, E., Zickermann, V., Hunte, C.
Deposit date:2018-08-02
Release date:2018-12-26
Method:X-RAY DIFFRACTION (3.79 Å)
Cite:Locking loop movement in the ubiquinone pocket of complex I disengages the proton pumps.
Nat Commun, 9, 2018
6H03
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OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX
Descriptor:Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, ...
Authors:Menny, A., Serna, M., Boyd, C.M., Gardner, S., Joseph, A.P., Topf, M., Bubeck, D.
Deposit date:2018-07-06
Release date:2018-12-19
Last modified:2018-12-26
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:CryoEM reveals how the complement membrane attack complex ruptures lipid bilayers.
Nat Commun, 9, 2018
6HD7
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CRYO-EM STRUCTURE OF THE RIBOSOME-NATA COMPLEX
Descriptor:Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5S rRNA, ...
Authors:Knorr, A.G., Becker, T., Beckmann, R.
Deposit date:2018-08-17
Release date:2018-12-19
Last modified:2019-01-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Ribosome-NatA architecture reveals that rRNA expansion segments coordinate N-terminal acetylation.
Nat. Struct. Mol. Biol., 26, 2019
6HRM
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E. COLI 70S D2D8 STAPLED RIBOSOME
Descriptor:stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA, 5S ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Schmied, W.H., Tnimov, Z., Uttamapinant, C., Rae, C.D., Fried, S.D., Chin, J.W.
Deposit date:2018-09-27
Release date:2018-12-19
Last modified:2019-01-02
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Controlling orthogonal ribosome subunit interactions enables evolution of new function.
Nature, 564, 2018
6N9E
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH A SHORT SUBSTRATE MIMIC CC-PMN AND BOUND TO MRNA AND P-SITE TRNA AT 3.7A RESOLUTION
Descriptor:23S Ribosomal RNA, 5S Ribosomal RNA, 50S Ribosomal Protein L2, ...
Authors:Melnikov, S.V., Khabibullina, N.F., Mairhofer, E., Vargas-Rodriguez, O., Reynolds, N.M., Micura, R., Soll, D., Polikanov, Y.S.
Deposit date:2018-12-03
Release date:2018-12-12
Last modified:2018-12-19
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Mechanistic insights into the slow peptide bond formation with D-amino acids in the ribosomal active site.
Nucleic Acids Res., 2018
6N9F
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CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH A SHORT SUBSTRATE MIMIC ACCA-DPHE AND BOUND TO MRNA AND P-SITE TRNA AT 3.7A RESOLUTION
Descriptor:23S Ribosomal RNA, 5S Ribosomal RNA, 50S Ribosomal Protein L2, ...
Authors:Melnikov, S.V., Khabibullina, N.F., Mairhofer, E., Vargas-Rodriguez, O., Reynolds, N.M., Micura, R., Soll, D., Polikanov, Y.S.
Deposit date:2018-12-03
Release date:2018-12-12
Last modified:2018-12-19
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Mechanistic insights into the slow peptide bond formation with D-amino acids in the ribosomal active site.
Nucleic Acids Res., 2018
6FYX
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STRUCTURE OF A PARTIAL YEAST 48S PREINITIATION COMPLEX WITH EIF5 N-TERMINAL DOMAIN (MODEL C1)
Descriptor:tRNAi, 18S ribosomal RNA, mRNA (31-MER), ...
Authors:Llacer, J.L., Hussain, T., Gordiyenko, Y., Ramakrishnan, V.
Deposit date:2018-03-12
Release date:2018-12-05
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.
Elife, 7, 2018
6FYY
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STRUCTURE OF A PARTIAL YEAST 48S PREINITIATION COMPLEX WITH EIF5 N-TERMINAL DOMAIN (MODEL C2)
Descriptor:tRNAi, 18S ribosomal RNA, mRNA (31-MER), ...
Authors:Llacer, J.L., Hussain, T., Gordiyenko, Y., Ramakrishnan, V.
Deposit date:2018-03-12
Release date:2018-12-05
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.
Elife, 7, 2018
6GZ3
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TRNA TRANSLOCATION BY THE EUKARYOTIC 80S RIBOSOME AND THE IMPACT OF GTP HYDROLYSIS, TRANSLOCATION-INTERMEDIATE-POST-1 (TI-POST-1)
Descriptor:28S ribosomal RNA, ap/P-site tRNA, mRNA, ...
Authors:Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
Deposit date:2018-07-03
Release date:2018-12-05
Last modified:2018-12-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
Cell Rep, 25, 2018
6GZ4
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TRNA TRANSLOCATION BY THE EUKARYOTIC 80S RIBOSOME AND THE IMPACT OF GTP HYDROLYSIS, TRANSLOCATION-INTERMEDIATE-POST-2 (TI-POST-2)
Descriptor:ribosomal protein uL2, ribosomal protein uS2, ribosomal protein uL3, ...
Authors:Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
Deposit date:2018-07-03
Release date:2018-12-05
Last modified:2018-12-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
Cell Rep, 25, 2018
6GZ5
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TRNA TRANSLOCATION BY THE EUKARYOTIC 80S RIBOSOME AND THE IMPACT OF GTP HYDROLYSIS, TRANSLOCATION-INTERMEDIATE-POST-3 (TI-POST-3)
Descriptor:28S ribosomal RNA, P/P-site-tRNA, mRNA, ...
Authors:Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
Deposit date:2018-07-03
Release date:2018-12-05
Last modified:2018-12-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
Cell Rep, 25, 2018
6I7V
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RIBOSOMAL PROTEIN PARALOGS BL31 AND BL36
Descriptor:16S ribosmal RNA, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Pulk, A., Cate, J.H.D., Remme, J., Lilleorg, S., Reier, K., Peil, L., Liiv, A., Tammsalu, T.
Deposit date:2018-11-19
Release date:2018-12-05
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Bacterial ribosome heterogeneity: Changes in ribosomal protein composition during transition into stationary growth phase.
Biochimie, 156, 2018
6MSB
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CRYO-EM STRUCTURES AND DYNAMICS OF SUBSTRATE-ENGAGED HUMAN 26S PROTEASOME
Descriptor:26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 3, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Mao, Y.D.
Deposit date:2018-10-16
Release date:2018-12-05
Last modified:2019-01-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome.
Nature, 565, 2019
6MSD
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CRYO-EM STRUCTURES AND DYNAMICS OF SUBSTRATE-ENGAGED HUMAN 26S PROTEASOME
Descriptor:26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 3, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Mao, Y.D.
Deposit date:2018-10-16
Release date:2018-12-05
Last modified:2019-01-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome.
Nature, 565, 2019
6DHE
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RT XFEL STRUCTURE OF THE DARK-STABLE STATE OF PHOTOSYSTEM II (0F, S1-RICH) AT 2.05 ANGSTROM RESOLUTION
Descriptor:Photosystem II protein D1 1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
Deposit date:2018-05-20
Release date:2018-11-21
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
6DHF
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RT XFEL STRUCTURE OF THE ONE-FLASH STATE OF PHOTOSYSTEM II (1F, S2-RICH) AT 2.08 ANGSTROM RESOLUTION
Descriptor:Photosystem II protein D1 1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
Authors:Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
Deposit date:2018-05-20
Release date:2018-11-21
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
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