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Mine: Large structure entries

1BOS
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SHIGA-LIKE TOXIN COMPLEXED WITH ITS RECEPTOR
Descriptor:SHIGA-LIKE TOXIN I B SUBUNIT, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Ling, H., Boodhoo, A., Hazes, B., Cummings, M.D., Armstrong, G.D., Brunton, J.L., Read, R.J.
Deposit date:1998-01-13
Release date:1999-02-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the shiga-like toxin I B-pentamer complexed with an analogue of its receptor Gb3.
Biochemistry, 37, 1998
3K1Q
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BACKBONE MODEL OF AN AQUAREOVIRUS VIRION BY CRYO-ELECTRON MICROSCOPY AND BIOINFORMATICS
Descriptor:VP1, VP3A, VP3B, ...
Authors:Cheng, L.P., Zhu, J., Hiu, W.H., Zhang, X.K., Honig, B., Fang, Q., Zhou, Z.H.
Deposit date:2009-09-28
Release date:2010-03-23
Last modified:2015-01-14
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Backbone Model of an Aquareovirus Virion by Cryo-Electron Microscopy and Bioinformatics
J.Mol.Biol., 397, 2010
4FQR
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CRYSTAL STRUCTURE OF BROADLY NEUTRALIZING ANTIBODY C05 BOUND TO H3 INFLUENZA HEMAGGLUTININ
Descriptor:Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, Broadly neutralizing antibody C05, ...
Authors:Ekiert, D.C., Wilson, I.A.
Deposit date:2012-06-25
Release date:2012-09-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Cross-neutralization of influenza A viruses mediated by a single antibody loop.
Nature, 489, 2012
4ABZ
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TETR(D) IN COMPLEX WITH TIGECYCLINE AND MAGNESIUM, CO-CRYSTALLIZED
Descriptor:Tetracycline repressor protein class D, TIGECYCLINE, MAGNESIUM ION, ...
Authors:Volkers, G., Hinrichs, W.
Deposit date:2011-12-12
Release date:2012-12-26
Last modified:2020-04-29
Method:X-RAY DIFFRACTION (1.886 Å)
Cite:TetR(D) in Complex with Tigecycline and Magnesium
To be Published
3J3Q
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ATOMIC-LEVEL STRUCTURE OF THE ENTIRE HIV-1 CAPSID
Descriptor:capsid protein
Authors:Perilla, J.R., Zhao, G., Zhang, P., Schulten, K.J.
Deposit date:2013-04-12
Release date:2013-05-29
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J3Y
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ATOMIC-LEVEL STRUCTURE OF THE ENTIRE HIV-1 CAPSID (186 HEXAMERS + 12 PENTAMERS)
Descriptor:capsid protein
Authors:Perilla, J.R., Zhao, G., Zhang, P., Schulten, K.J.
Deposit date:2013-05-06
Release date:2013-05-29
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
4BP7
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ASYMMETRIC STRUCTURE OF A VIRUS-RECEPTOR COMPLEX
Descriptor:COAT PROTEIN
Authors:Dent, K.C., Thompson, R., Barker, A.M., Barr, J.N., Hiscox, J.A., Stockley, P.G., Ranson, N.A.
Deposit date:2013-05-23
Release date:2013-07-17
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (39 Å)
Cite:The Asymmetric Structure of an Icosahedral Virus Bound its Receptor Suggests a Mechanism for Genome Release.
Structure, 21, 2013
4BTS
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THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Descriptor:TRANSLATION INITIATION FACTOR EIF-1A FAMILY PROTEIN, 40S RIBOSOMAL PROTEIN RPS28E, 40S RIBOSOMAL PROTEIN S8, ...
Authors:Weisser, M., Voigts-Hoffmann, F., Rabl, J., Leibundgut, M., Ban, N.
Deposit date:2013-06-19
Release date:2013-07-17
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (3.703 Å)
Cite:The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A.
Nat. Struct. Mol. Biol., 20, 2013
4O9Y
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CRYSTAL STRUCTURE OF TCDA1
Descriptor:TcdA1
Authors:Meusch, D., Gatsogiannis, C., Efremov, R.G., Lang, A.E., Hofnagel, O., Vetter, I.R., Aktories, K., Raunser, S.
Deposit date:2014-01-03
Release date:2014-02-26
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.502 Å)
Cite:Mechanism of Tc toxin action revealed in molecular detail.
Nature, 508, 2014
3J6B
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STRUCTURE OF THE YEAST MITOCHONDRIAL LARGE RIBOSOMAL SUBUNIT
Descriptor:21S ribosomal RNA, 54S ribosomal protein RML2, mitochondrial, ...
Authors:Amunts, A., Brown, A., Bai, X.C., Llacer, J.L., Hussain, T., Emsley, P., Long, F., Murshudov, G., Scheres, S.H.W., Ramakrishnan, V.
Deposit date:2014-01-22
Release date:2014-04-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the yeast mitochondrial large ribosomal subunit.
Science, 343, 2014
3WHE
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A NEW CONSERVED NEUTRALIZING EPITOPE AT THE GLOBULAR HEAD OF HEMAGGLUTININ IN H3N2 INFLUENZA VIRUSES
Descriptor:Hemagglutinin, immunoglobulin heavy chain, immunoglobulin light chain, ...
Authors:Fujii, Y., Sumida, T., Shirouzu, M., Yokoyama, S.
Deposit date:2013-08-25
Release date:2014-04-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4 Å)
Cite:Conserved Neutralizing Epitope at Globular Head of Hemagglutinin in H3N2 Influenza Viruses.
J.Virol., 2014
4CTF
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THE LIMITS OF STRUCTURAL PLASTICITY IN A PICORNAVIRUS CAPSID REVEALED BY A MASSIVELY EXPANDED EQUINE RHINITIS A VIRUS PARTICLE
Descriptor:VP1, EQUINE RHINITIS A VIRUS, P1
Authors:Bakker, S.E., Groppelli, E., Pearson, A.R., Stockley, P.G., Rowlands, D.J., Ranson, N.A.
Deposit date:2014-03-13
Release date:2014-05-21
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Limits of Structural Plasticity in a Picornavirus Capsid Revealed by a Massively Expanded Equine Rhinitis a Virus Particle.
J.Virol., 88, 2014
4CTG
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THE LIMITS OF STRUCTURAL PLASTICITY IN A PICORNAVIRUS CAPSID REVEALED BY A MASSIVELY EXPANDED EQUINE RHINITIS A VIRUS PARTICLE
Descriptor:P1
Authors:Bakker, S.E., Groppelli, E., Pearson, A.R., Stockley, P.G., Rowlands, D.J., Ranson, N.A.
Deposit date:2014-03-13
Release date:2014-05-21
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Limits of Structural Plasticity in a Picornavirus Capsid Revealed by a Massively Expanded Equine Rhinitis a Virus Particle.
J.Virol., 88, 2014
4NWR
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COMPUTATIONALLY DESIGNED TWO-COMPONENT SELF-ASSEMBLING TETRAHEDRAL CAGE T33-28
Descriptor:integron gene cassette protein, Macrophage migration inhibitory factor-like protein
Authors:McNamara, D.E., King, N.P., Bale, J.B., Sheffler, W., Baker, D., Yeates, T.O.
Deposit date:2013-12-06
Release date:2014-05-28
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
3J6X
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S. CEREVISIAE 80S RIBOSOME BOUND WITH TAURA SYNDROME VIRUS (TSV) IRES, 5 DEGREE ROTATION (CLASS II)
Descriptor:25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Koh, C.S., Brilot, A.F., Grigorieff, N., Korostelev, A.A.
Deposit date:2014-04-16
Release date:2014-06-11
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center.
Proc.Natl.Acad.Sci.USA, 111, 2014
3J6Y
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S. CEREVISIAE 80S RIBOSOME BOUND WITH TAURA SYNDROME VIRUS (TSV) IRES, 2 DEGREE ROTATION (CLASS I)
Descriptor:25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Koh, C.S., Brilot, A.F., Grigorieff, N., Korostelev, A.A.
Deposit date:2014-04-16
Release date:2014-06-11
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center.
Proc.Natl.Acad.Sci.USA, 111, 2014
4V40
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BETA-GALACTOSIDASE
Descriptor:BETA-GALACTOSIDASE, MAGNESIUM ION
Authors:Jacobson, R.H., Zhang, X., Dubose, R.F., Matthews, B.W.
Deposit date:1994-07-18
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of beta-galactosidase from E. coli.
Nature, 369, 1994
4V41
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E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC)
Descriptor:BETA-GALACTOSIDASE, MAGNESIUM ION
Authors:Juers, D.H., Jacobson, R.H., Wigley, D., Zhang, X.J., Huber, R.E., Tronrud, D.E., Matthews, B.W.
Deposit date:2000-06-07
Release date:2014-07-09
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
4V42
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CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION.
Descriptor:30S 16S RIBOSOMAL RNA, TRNA(PHE), A- AND P-SITE MESSENGER RNA CODONS, ...
Authors:Yusupov, M.M., Yusupova, G.Z., Baucom, A., Lieberman, K., Earnest, T.N., Cate, J.H.D., Noller, H.F.
Deposit date:2001-03-30
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Crystal structure of the ribosome at 5.5 A resolution
Science, 292, 2001
4V43
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STRUCTURAL AND MECHANISTIC BASIS FOR ALLOSTERY IN THE BACTERIAL CHAPERONIN GROEL
Descriptor:GROEL PROTEIN
Authors:Wang, J.
Deposit date:2002-01-02
Release date:2014-07-09
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:A GroEL/GroES complex structure revisited: the structure-based mechanism of ATP hydrolysis
To be Published
4V44
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E. COLI (LACZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE
Descriptor:Beta-Galactosidase, 2-deoxy-2-fluoro-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, MAGNESIUM ION, ...
Authors:Juers, D.H., McCarter, J.D., Withers, S.G., Matthews, B.W.
Deposit date:2001-09-13
Release date:2014-07-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
4V45
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E. COLI (LACZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE
Descriptor:Beta-Galactosidase, 2-deoxy-2-fluoro-beta-D-galactopyranose, MAGNESIUM ION, ...
Authors:Juers, D.H., McCarter, J.D., Withers, S.G., Matthews, B.W.
Deposit date:2001-09-13
Release date:2014-07-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase
Biochemistry, 40, 2001
4V46
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CRYSTAL STRUCTURE OF THE BAFF-BAFF-R COMPLEX
Descriptor:Tumor necrosis factor ligand superfamily member 13B, Tumor necrosis factor receptor superfamily member 13C, MAGNESIUM ION
Authors:Kim, H.M., Yu, K.S., Lee, M.E., Shin, D.R., Kim, Y.S., Paik, S.G., Yoo, O.J., Lee, H., Lee, J.-O.
Deposit date:2003-03-23
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the BAFF-BAFF-R complex and its implications for receptor activation
NAT.STRUCT.BIOL., 10, 2003
4V47
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REAL SPACE REFINED COORDINATES OF THE 30S AND 50S SUBUNITS FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE EF-G.GTP STATE OF E. COLI 70S RIBOSOME
Descriptor:23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Gao, H., Sengupta, J., Valle, M., Korostelev, A., Eswar, N., Stagg, S.M., Van Roey, P., Agrawal, R.K., Harvey, S.T., Sali, A., Chapman, M.S., Frank, J.
Deposit date:2003-05-06
Release date:2014-07-09
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (12.3 Å)
Cite:Study of the structural dynamics of the E. coli 70S ribosome using real space refinement
Cell(Cambridge,Mass.), 113, 2003
4V48
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REAL SPACE REFINED COORDINATES OF THE 30S AND 50S SUBUNITS FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE INITIATION-LIKE STATE OF E. COLI 70S RIBOSOME
Descriptor:23S ribosomal RNA, 5S ribosomal RNA, tRNA-PHE, ...
Authors:Gao, H., Sengupta, J., Valle, M., Korostelev, A., Eswar, N., Stagg, S.M., Van Roey, P., Agrawal, R.K., Harvey, S.T., Sali, A., Chapman, M.S., Frank, J.
Deposit date:2003-05-06
Release date:2014-07-09
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Study of the structural dynamics of the E. coli 70S ribosome using real space refinement
Cell(Cambridge,Mass.), 113, 2003
169117
PDB entries from 2020-09-23