[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 421 items for (author: koh & f)

EMDB-55526:
Staphylococcus aureus 70S initiation complex with a natural mRNA
Method: single particle / : Bahena Ceron R, Klaholz B, Marzi S

PDB-9t4r:
Staphylococcus aureus 70S initiation complex with a natural mRNA
Method: single particle / : Bahena Ceron R, Klaholz B, Marzi S

EMDB-74336:
Rabbit muscle aldolase cryo-EM reconstruction obtained from Krios 5 with Selectris-X Falcon 4i detector
Method: single particle / : Koh A, Rai J, Karia D, Yu L, Raschdorf O

EMDB-63950:
Cryo-EM structure of Leminorella grimontii GatC in the presence of D-xylose
Method: single particle / : Takahashi YS, Kohga H, Shigematsu H, Miyazaki R, Tsukazaki T

EMDB-63951:
Cryo-EM structure of Leminorella grimontii GatC in the absence of D-xylose
Method: single particle / : Takahashi YS, Kohaga H, Shigematsu H, Miyazaki R, Tsukazaki T

EMDB-71704:
HU-38 Fab with PRAME pMHC
Method: single particle / : Mortenson DE, Yu X

PDB-9pkv:
HU-38 Fab with PRAME pMHC
Method: single particle / : Mortenson DE, Yu X

EMDB-51612:
1.5A Apoferritin imaged on 200kV Glacios with Cold-FEG and Falcon 4i
Method: single particle / : Koh FA, Yu L, Kotecha A

EMDB-49124:
Consensus reconstruction of the Dp71L-PP1A-eIF2alpha holophosphatase stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-49162:
Focused refinement of G-actin within the Dp71L-PP1A-eIF2alpha-DNAseI-G-actin complex
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49163:
Focused refinement of the Dp71L-eIF2alpha-PP1A subcomplex within the holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49164:
Focused refinement of DNAseI within the Dp71L-eIF2alpha-PP1A-Gactin-DNAseI holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49223:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

PDB-9nb9:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-50298:
Candidatus Methanosuratincola verstraetei strain LCB70 cell biology. Chemoreceptor array, archaella, putative virus-like particles.
Method: electron tomography / : Petrosian NS, Pilhofer M

EMDB-50305:
Candidatus Methanosuratincola verstraetei strain LCB70 cell biology, an example of a dividing cell
Method: electron tomography / : Petrosian NS, Pilhofer M

EMDB-50308:
Candidatus Methanosuratincola verstraetei strain LCB70, an example of BES treated cell
Method: electron tomography / : Petrosian NS, Pilhofer M

EMDB-50313:
Candidatus Methanosuratincola verstraetei strain LCB70, an example of interaction between two cells
Method: electron tomography / : Petrosian NS, Pilhofer M

EMDB-50315:
Candidatus Methanosuratincola verstraetei strain LCB70 cell biology, an example of interaction between two cells
Method: electron tomography / : Petrosian NS, Pilhofer M

EMDB-49752:
Consensus refinement for the Uromodulin filament lattice interface
Method: single particle / : Chang AN, Fitzpatrick AWP

EMDB-49792:
Uromodulin filament lattice interface from human urine
Method: single particle / : Chang AN, Fitzpatrick AWP

EMDB-49793:
Uromodulin filament lattice in the straight arrangement from human urine
Method: helical / : Chang AN, Fitzpatrick AWP

EMDB-49794:
Uromodulin filament lattice in the kinked arrangement from human urine
Method: single particle / : Chang AN, Fitzpatrick AWP

PDB-9nu1:
Uromodulin filament lattice interface from human urine
Method: single particle / : Chang AN, Fitzpatrick AWP

PDB-9nu2:
Uromodulin filament lattice in the straight arrangement from human urine
Method: helical / : Chang AN, Fitzpatrick AWP

PDB-9nu3:
Uromodulin filament lattice in the kinked arrangement from human urine
Method: single particle / : Chang AN, Fitzpatrick AWP

EMDB-50585:
Icosahedral Encapsulin with a closed pore state
Method: single particle / : Capper MJ, Kohhnke J

PDB-9fn9:
Icosahedral Encapsulin with a closed pore state
Method: single particle / : Capper MJ, Kohhnke J

EMDB-50586:
CryoEM structure of Encapsulin::tdNfsB with an open pore state
Method: single particle / : Capper MJ, Kohhnke J

PDB-9fna:
CryoEM structure of Encapsulin::tdNfsB with an open pore state
Method: single particle / : Capper MJ, Kohhnke J

EMDB-19627:
Cryo-EM structure of CAK modified by covalent inhibitor SY-1365
Method: single particle / : Feng J, Koh AF, Kotecha A, Greber BJ

EMDB-19628:
Cryo-EM structure of CAK in complex with SY-5609
Method: single particle / : Feng J, Cronin NB, Marineau JJ, Greber BJ

PDB-8s0r:
Cryo-EM structure of CAK modified by covalent inhibitor SY-1365
Method: single particle / : Feng J, Koh AF, Kotecha A, Greber BJ

PDB-8s0t:
Cryo-EM structure of CAK in complex with SY-5609
Method: single particle / : Feng J, Cronin NB, Marineau JJ, Greber BJ

EMDB-18677:
Structure of the PBD of human SRP68/72 (cryoSPARC 3DFlex)
Method: single particle / : Zhong Y, Feng J, Koh AF, Kotecha A, Greber BJ, Ataide SF

PDB-8qvx:
Structure of the PBD of human SRP68/72 (cryoSPARC 3DFlex)
Method: single particle / : Zhong Y, Feng J, Koh AF, Kotecha A, Greber BJ, Ataide SF

EMDB-51463:
ApoF at 2.2A resolution imaged at 0.55A/pixel on Falcon C
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Plitzko J, Aricescu R, Lander GC, Greber B, Kotecha A

EMDB-51481:
Apoferritin at 2.1A from Falcon C imaged at 0.7Apix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-51483:
Apoferritin at 2.2A from Falcon C imaged at 0.9Apix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-51487:
T20S Proteosome at 2.7A from Falcon C imaged at 0.7Apix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Khavnekar S, Kotecha A

EMDB-51503:
T20S Proteosome at 2.9A from Falcon C imaged at 0.9Apix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Khavnekar S, Kotecha A

EMDB-51506:
GABAA receptor at 2.8A from Falcon C imaged at 0.7Apix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-51508:
GABAA receptor at 2.8A from Falcon C imaged at 0.9Apix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-51511:
Rabbit muscle aldolase at 3A resolution imaged at 0.55A/pix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-51512:
Rabbit muscle aldolase at 2.8A imaged at 0.7Apix
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-51519:
CAK complex at 4A imaged on Falcon C
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A, Greber B

EMDB-51525:
Human Haemoglobin at 5A imaged on Falcon C
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-51526:
Human Transthyretin at 3.5A imaged on Falcon C
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A, Lander GC

EMDB-51540:
Adeno-associated Virus 9 at 2.8A imaged on Falcon C
Method: single particle / : Koh FA, Karia D, Yang W, Yu L, Kotecha A

EMDB-41434:
Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L, Kirst H, Kerfeld CA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more