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Showing all 50 items for (author: jobe & a)

EMDB-50849:
Cryo-EM structure of E. coli transcription factor NrdR in the ATP-bound, filamentous form
Method: single particle / : Martinez-Carranza M, Rozman Grinberg I, Sjoberg BM, Logan DT, Stenmark P

EMDB-50819:
Cryo-EM structure of E. coli transcription factor NrdR in complex with DNA
Method: single particle / : Banerjee I, Bimai O, Martinez-Carranza M, Stenmark P, Sjoberg BM, Rozman Grinberg I, Logan DT

EMDB-50111:
Cryo-EM structure of the I923V MDA5-dsRNA filament without nucleotide
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50136:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 81-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50137:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 88-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50150:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 73-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50165:
Cryo-EM structure of the I923V MDA5-dsRNA filament in complex with ATP
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-50175:
Cryo-EM structure of the A946T MDA5-dsRNA filament
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f0j:
Cryo-EM structure of the I923V MDA5-dsRNA filament without nucleotide
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f1u:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 81-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f20:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 88-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f2l:
Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 73-degree helical twist
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f2w:
Cryo-EM structure of the I923V MDA5-dsRNA filament in complex with ATP
Method: helical / : Singh R, Herrero del Valle A, Modis Y

PDB-9f3p:
Cryo-EM structure of the A946T MDA5-dsRNA filament
Method: helical / : Singh R, Herrero del Valle A, Modis Y

EMDB-17360:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric state produced in the presence of dATP and CTP
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17361:
Cryo-EM structure of the dimeric form of the anaerobic ribonucleotide reductase from Prevotella copri produced in the presence of dATP and CTP
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17373:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/dTTP/GTP-bound state
Method: single particle / : Bimai O, Banerjee I, Sjoberg BM, Logan DT

EMDB-17385:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dGTP/ATP-bound state
Method: single particle / : Bimai O, Banerjee I, Sjoberg BM, Logan DT

PDB-8p2c:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric state produced in the presence of dATP and CTP
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

PDB-8p2d:
Cryo-EM structure of the dimeric form of the anaerobic ribonucleotide reductase from Prevotella copri produced in the presence of dATP and CTP
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

PDB-8p2s:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/dTTP/GTP-bound state
Method: single particle / : Bimai O, Banerjee I, Sjoberg BM, Logan DT

PDB-8p39:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dGTP/ATP-bound state
Method: single particle / : Bimai O, Banerjee I, Sjoberg BM, Logan DT

EMDB-17357:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/CTP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17358:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dATP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-17359:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric, dATP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

PDB-8p23:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/CTP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

PDB-8p27:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dATP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

PDB-8p28:
Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric, dATP-bound state
Method: single particle / : Banerjee I, Bimai O, Sjoberg BM, Logan DT

EMDB-13178:
Streptomyces coelicolor ATP-loaded NrdR
Method: single particle / : Martinez-Carranza M, Stenmark P

EMDB-13179:
Streptomyces coelicolor dATP/ATP-loaded NrdR in complex with its cognate DNA
Method: single particle / : Martinez-Carranza M, Stenmark P

EMDB-13182:
Streptomyces coelicolor dATP/ATP-loaded NrdR octamer
Method: single particle / : Martinez-Carranza M, Stenmark P

EMDB-25448:
Negative-stain EM reconstruction of SpFN_1B-06-PL, a SARS-CoV-2 spike fused to H.pylori ferritin nanoparticle vaccine candidate
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25449:
RFN_131, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Receptor-Binding Domain
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25450:
pCoV146, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike Receptor-Binding and N-Terminal Domains
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25451:
pCoV111, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike S1 Subunit
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-12985:
Low resolution reconstruction of the dATP-inhibited complex of the ribonucleotide reductase NrdA and NrdB proteins from Leeuwenhoekiella blandensis
Method: single particle / : Banerjee I, Rozman Grinberg I, Sjoberg BM, Logan DT

PDB-4v8m:
High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
Method: single particle / : Hashem Y, des Georges A, Fu J, Buss SN, Jossinet F, Jobe A, Zhang Q, Liao HY, Grassucci RA, Bajaj C, Westhof E, Madison-Antenucci S, Frank J

EMDB-5936:
Electron cryo-microscopy of the Moloney murine leukemia virus furin precursor Env in its native form
Method: single particle / : Sjoberg M, Wu SR, Loving R, Rantalainen K, Lindqvist B, Garoff H

EMDB-5937:
Electron cryo-microscopy of the Moloney murine leukemia virus furin precursor Env in its isomerization arrested state (IAS) form
Method: single particle / : Sjoberg M, Wu SR, Loving R, Rantalainen K, Lindqvist B, Garoff H

EMDB-5938:
Electron cryo-microscopy of the Moloney murine leukemia virus furin precursor Env in its native form in complex with 83A25 Fab
Method: single particle / : Sjoberg M, Wu SR, Loving R, Rantalainen K, Lindqvist B, Garoff H

EMDB-5939:
Electron cryo-microscopy of the partially glycosylated gp80 form of the wild type furin precursor Env of Moloney murine leukemia virus
Method: single particle / : Sjoberg M, Wu SR, Loving R, Rantalainen K, Lindqvist B, Garoff H

EMDB-2239:
Cryo-electron microscopy structure of the Trypanosoma brucei 80S ribosome
Method: single particle / : Hashem Y, des Georges A, Fu J, Buss SN, Jossinet F, Jobe A, Zhang Q, Liao HY, Grassucci B, Bajaj C, Westhof E, Madison-Antenucci S, Frank J

EMDB-2065:
Electron cryo-microscopy of R-peptide precursor of Moloney murine leukemia virus Env in its isomerization arrested intermediate state
Method: single particle / : Loving R, Wu SR, Sjoberg M, Lindqvist B, Garoff H

EMDB-2066:
Electron cryo-microscopy of the L651A mutant R-peptide precursor Env of Moloney murine leukemia virus in its native state
Method: single particle / : Loving R, Wu SR, Sjoberg M, Lindqvist B, Garoff H

EMDB-2067:
Electron cryo-microscopy of R-peptide precursor of Moloney murine leukemia virus Env in its native form
Method: single particle / : Loving R, Wu SR, Sjoberg M, Lindqvist B, Garoff H

EMDB-1800:
Single particle cryo-electron microscopy analysis of CD4 bound HIV-1 Env
Method: single particle / : Wu SR, Loving R, Lindqvist B, Hebert H, Koeck P, Sjoberg M, Garoff H

EMDB-1801:
Single particle cryo-electron microscopy analysis of unliganded HIV-1 Env
Method: single particle / : Wu SR, Loving R, Lindqvist B, Hebert H, Koeck P, Sjoberg M, Garoff H

EMDB-2863:
Surface rendered vitrified native Env
Method: single particle / : Wu SR, Sjoberg M, Wallin M, Lindqvist B, Ekstrom M, Hebert H, Koeck P, Garoff H

EMDB-2864:
Vitrified IAS Env
Method: single particle / : Wu SR, Sjoberg M, Wallin M, Lindqvist B, Ekstrom M, Hebert H, Koeck P, Garoff H

EMDB-1018:
The first step: activation of the Semliki Forest virus spike protein precursor causes a localized conformational change in the trimeric spike.
Method: single particle / : Fuller SD

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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