[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,395 items for (author: ando & n)

EMDB-47752:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

EMDB-47805:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

PDB-9e93:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

PDB-9e9v:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

EMDB-55369:
Control media rat neuronal 80S ribosome - consensus
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55370:
Control media rat neuronal 80S ribosome state - decoding
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55371:
Control media rat neuronal 80S ribosome state - peptide bond formation
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55372:
Control media rat neuronal 80S ribosome state - pre-translocating
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55373:
Control media rat neuronal 80S ribosome state - hibernating I
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55374:
Nutrient deprived rat neuronal 80S ribosome - consensus
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55375:
Nutrient deprived rat neuronal 80S ribosome state - decoding
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55376:
Nutrient deprived rat neuronal 80S ribosome state - peptide bond formation
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55377:
Nutrient deprived rat neuronal 80S ribosome state - pre-translocating
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55378:
Nutrient deprived rat neuronal 80S ribosome state - hibernating II
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55379:
Nutrient deprived rat neuronal 80S ribosome state - hibernating III
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55381:
Nutrient deprived rat neuronal 80S ribosome state - hibernating IV
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55383:
Nutrient deprived rat neuronal 110S disome
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55384:
1 h nitrogen + carbon starved yeast-rat-hybrid hibernating disome
Method: subtomogram averaging / : Schwarz A, Schuman EM, Dietrich LT

EMDB-55385:
3-4 h cold shock chicken neuronal hibernating tetrasome
Method: subtomogram averaging / : Schwarz A, Schuman EM, Dietrich LT

EMDB-48699:
Consensus reconstitution of SLC33A1 in complex with a Fv clasp
Method: single particle / : Gad M, Hite RK

EMDB-72725:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-9ya9:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

EMDB-70642:
L-cluster free apo-NifEN expressed in E. coli
Method: single particle / : Neumann B, Brandon K, Suder DS, Hu Y, Ribbe MW, Gonen S

PDB-9onj:
L-cluster free apo-NifEN expressed in E. coli
Method: single particle / : Neumann B, Brandon K, Suder DS, Hu Y, Ribbe MW, Gonen S

EMDB-70643:
L-cluster inward bound holo-NifEN expressed in E. coli
Method: single particle / : Neumann B, Brandon K, Suder DS, Hu Y, Ribbe MW, Gonen S

PDB-9onk:
L-cluster inward bound holo-NifEN expressed in E. coli
Method: single particle / : Neumann B, Brandon K, Suder DS, Hu Y, Ribbe MW, Gonen S

EMDB-73406:
Negative stained A. vinelandii NifEN-B' fusion
Method: single particle / : Neumann B, Brandon K, Hu Y, Ribbe MW, Gonen S

EMDB-73407:
Negative stained A. vinelandii NifEN/NifH ADPxAIF4- stabilized complex
Method: single particle / : Neumann B, Brandon K, Hu Y, Ribbe MW, Gonen S

EMDB-48337:
FnoCas12a bridge helix variant state 1
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48338:
FnoCas12a bridge helix variant state 2
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48339:
FnoCas12a bridge helix variant state 3
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48340:
FnoCas12a bridge helix variant state 4a
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48341:
FnoCas12a bridge helix variant state 4b
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkt:
FnoCas12a bridge helix variant state 1
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mku:
FnoCas12a bridge helix variant state 2
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkv:
FnoCas12a bridge helix variant state 3
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkw:
FnoCas12a bridge helix variant state 4a
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkx:
FnoCas12a bridge helix variant state 4b
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-51820:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-51899:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52095:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52299:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h3g:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h6i:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hes:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hmw:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-70676:
Cryo-EM Structure of the Escherichia phage HK446 Rip1 in complex with the Enterobacteria phage T6 small terminase
Method: single particle / : Patel PH, Maxwell KL, Norris MJ

PDB-9oox:
Cryo-EM Structure of the Escherichia phage HK446 Rip1 in complex with the Enterobacteria phage T6 small terminase
Method: single particle / : Patel PH, Maxwell KL, Norris MJ

EMDB-75024:
Cryo-EM structure of the human BK channel bound to the agonist NS1619
Method: single particle / : Gonzalez-Sanabria N, Contreras GF, Perozo E, Latorre R

PDB-10ad:
Cryo-EM structure of the human BK channel bound to the agonist NS1619
Method: single particle / : Gonzalez-Sanabria N, Contreras GF, Perozo E, Latorre R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more