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PDB: 224 results

7RTZ
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X-ray crystallographic structure of a beta-hairpin peptide derived from amyloid beta 14-40
Descriptor: Amyloid-beta protein 40, CHLORIDE ION
Authors:Samdin, T.D, Kreutzer, A.G, Nowick, J.S.
Deposit date:2021-08-16
Release date:2022-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A beta-Barrel-Like Tetramer Formed by a beta-Hairpin Derived From A beta
Chem Sci, 2023
2ROZ
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Structure of the C-terminal PID Domain of Fe65L1 Complexed with the Cytoplasmic Tail of APP Reveals a Novel Peptide Binding Mode
Descriptor: Amyloid beta A4 precursor protein-binding family B member 2, peptide from Amyloid beta A4 protein
Authors:Li, H, Koshiba, S, Tochio, N, Watanabe, S, Harada, T, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-25
Release date:2008-07-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
1MWP
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N-TERMINAL DOMAIN OF THE AMYLOID PRECURSOR PROTEIN
Descriptor: AMYLOID A4 PROTEIN
Authors:Rossjohn, J, Cappai, R, Feil, S.C, Henry, A, McKinstry, W.J, Galatis, D, Hesse, L, Multhaup, G, Beyreuther, K, Masters, C.L, Parker, M.W.
Deposit date:1999-03-09
Release date:2000-03-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the N-terminal, growth factor-like domain of Alzheimer amyloid precursor protein.
Nat.Struct.Biol., 6, 1999
4YN0
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BU of 4yn0 by Molmil
Crystal structure of APP E2 domain in complex with DR6 CRD domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amyloid beta A4 protein, MAGNESIUM ION, ...
Authors:Xu, K, Nikolov, D.
Deposit date:2015-03-08
Release date:2015-04-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of DR6 in complex with the amyloid precursor protein provides insight into death receptor activation.
Genes Dev., 29, 2015
5MYK
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Structure of Pyroglutamate-Abeta-specific Fab c#17 in complex with murine Abeta-pE3-18PEGb
Descriptor: Amyloid beta A4 protein, Fab c#17 heavy chain, Fab c#17 light chain
Authors:Parthier, C, Piechotta, A, Stubbs, M.T.
Deposit date:2017-01-26
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analyses of pyroglutamate-amyloid-beta-specific antibodies as a basis for Alzheimer immunotherapy.
J. Biol. Chem., 292, 2017
5KK3
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Atomic Resolution Structure of Monomorphic AB42 Amyloid Fibrils
Descriptor: Beta-amyloid protein 42
Authors:Colvin, M.T, Silvers, R, Zhe Ni, Q, Can, T.V, Sergeyev, I, Rosay, M, Donovan, K.J, Michael, B, Wall, J, Linse, S, Griffin, R.G.
Deposit date:2016-06-20
Release date:2016-07-13
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Atomic Resolution Structure of Monomorphic A beta 42 Amyloid Fibrils.
J.Am.Chem.Soc., 138, 2016
7MRN
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BU of 7mrn by Molmil
Mouse CNTN5 APP complex
Descriptor: Contactin-5, N-APP
Authors:Bouyain, S, Karuppan, S.J.
Deposit date:2021-05-07
Release date:2022-01-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Members of the vertebrate contactin and amyloid precursor protein families interact through a conserved interface.
J.Biol.Chem., 298, 2021
7U4P
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Covalently stabilized triangular trimer composed of Abeta17-36 beta-hairpins
Descriptor: Amyloid-beta 17-36 peptide
Authors:Kreutzer, A.G, Haerianardakani, S, Nowick, J.S.
Deposit date:2022-02-28
Release date:2023-03-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Antibodies Raised Against an A beta Oligomer Mimic Recognize Pathological Features in Alzheimer's Disease and Associated Amyloid-Disease Brain Tissue.
Acs Cent.Sci., 10, 2024
6O4J
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BU of 6o4j by Molmil
Amyloid Beta KLVFFAENVGS 16-26 D23N Iowa mutation
Descriptor: Amyloid-beta precursor protein
Authors:Griner, S.L, Sawaya, M.R, Rodriguez, J.A, Cascio, D, Gonen, T.
Deposit date:2019-02-28
Release date:2019-10-30
Last modified:2023-10-11
Method:ELECTRON CRYSTALLOGRAPHY (1.402 Å)
Cite:Structure based inhibitors of Amyloid Beta core suggest a common interface with Tau.
Elife, 8, 2019
4HIX
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Crystal structure of a humanised 3D6 Fab bound to amyloid beta peptide
Descriptor: Beta-amyloid protein 40, Humanized 3D6 Fab heavy chain, Humanized 3D6 Fab light chain
Authors:Miles, L.A, Crespi, G.A.N, Parker, M.W.
Deposit date:2012-10-12
Release date:2013-03-13
Last modified:2014-03-19
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Bapineuzumab captures the N-terminus of the Alzheimer's disease amyloid-beta peptide in a helical conformation.
Sci Rep, 3, 2013
6GFI
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Structure of Human Mesotrypsin in complex with APPI variant T11V/M17R/I18F/F34V
Descriptor: 1,2-ETHANEDIOL, Amyloid-beta A4 protein, PRSS3 protein
Authors:Shahar, A, Cohen, I, Radisky, E, Papo, N, Naftaly, S.
Deposit date:2018-04-30
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mapping protein selectivity landscapes using multi-target selective screening and next-generation sequencing of combinatorial libraries.
Nat Commun, 9, 2018
8BG9
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BU of 8bg9 by Molmil
Murine amyloid-beta filaments with the Arctic mutation (E22G) from APP(NL-G-F) mouse brains | ABeta
Descriptor: Amyloid-beta protein 40
Authors:Yang, Y, Zhang, W.J, Murzin, A.G, Schweighauser, M, Huang, M, Lovestam, S.K.A, Peak-Chew, S.Y, Macdonald, J, Lavenir, I, Ghetti, B, Graff, C, Kumar, A, Nordber, A, Goedert, M, Scheres, S.H.W.
Deposit date:2022-10-27
Release date:2023-01-18
Last modified:2023-02-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of amyloid-beta filaments with the Arctic mutation (E22G) from human and mouse brains.
Acta Neuropathol, 145, 2023
1HZ3
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ALZHEIMER'S DISEASE AMYLOID-BETA PEPTIDE (RESIDUES 10-35)
Descriptor: A-BETA AMYLOID
Authors:Zhang, S, Iwata, K, Lachenmann, M.J, Peng, J.W, Li, S, Stimson, E.R, Lu, Y, Felix, A.M, Maggio, J.E, Lee, J.P.
Deposit date:2001-01-23
Release date:2001-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The Alzheimer's peptide a beta adopts a collapsed coil structure in water.
J.Struct.Biol., 130, 2000
8C3H
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Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex a long aspartimide degron peptide
Descriptor: Cereblon isoform 4, P3(40), ZINC ION
Authors:Heim, C, Spring, A.K, Hartmann, M.D.
Deposit date:2022-12-23
Release date:2023-02-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Cereblon neo-substrate binding mimics the recognition of the cyclic imide degron.
Biochem.Biophys.Res.Commun., 646, 2023
5C67
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Human Mesotrypsin in complex with amyloid precursor protein inhibitor variant APPI-M17G/I18F/F34V
Descriptor: Amyloid beta A4 protein, Trypsin-3
Authors:Kayode, O, Sankaran, B, Radisky, E.S.
Deposit date:2015-06-22
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Combinatorial protein engineering of proteolytically resistant mesotrypsin inhibitors as candidates for cancer therapy.
Biochem.J., 473, 2016
6IYC
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Recognition of the Amyloid Precursor Protein by Human gamma-secretase
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhou, R, Yang, G, Guo, X, Zhou, Q, Lei, J, Shi, Y.
Deposit date:2018-12-14
Release date:2019-01-23
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Recognition of the amyloid precursor protein by human gamma-secretase.
Science, 363, 2019
8FF2
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BU of 8ff2 by Molmil
Amyloid-beta (1-40) fibrils derived from a CAA patient
Descriptor: Amyloid-beta precursor protein
Authors:Crooks, E.J, Fu, Z, Chowdhury, S, Smith, S.O.
Deposit date:2022-12-07
Release date:2023-12-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:An electrostatic cluster guides A beta 40 fibril formation in sporadic and Dutch-type cerebral amyloid angiopathy.
J.Struct.Biol., 216, 2024
8FF3
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Amyloid-beta (1-40) fibrils derived from familial Dutch-type CAA patient (population B)
Descriptor: Amyloid-beta precursor protein
Authors:Crooks, E.J, Fu, Z, Chowdury, S, Smith, S.O.
Deposit date:2022-12-07
Release date:2023-12-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:An electrostatic cluster guides A beta 40 fibril formation in sporadic and Dutch-type cerebral amyloid angiopathy.
J.Struct.Biol., 216, 2024
7B3K
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BU of 7b3k by Molmil
Dynamic complex between all-D-enantiomeric peptide D3 with L723P mutant of amyloid precursor protein (APP) 672-726 fragment (amyloid beta 1-55)
Descriptor: D3 all D-enantimeric peptide, Isoform L-APP677 of Amyloid-beta precursor protein
Authors:Bocharov, E.V, Volynsky, P.E, Okhrimenko, I.S, Urban, A.S.
Deposit date:2020-12-01
Release date:2021-01-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:All - d - Enantiomeric Peptide D3 Designed for Alzheimer's Disease Treatment Dynamically Interacts with Membrane-Bound Amyloid-beta Precursors.
J.Med.Chem., 64, 2021
7B3J
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Dynamic complex between all-D-enantiomeric peptide D3 with wild-type amyloid precursor protein 672-726 fragment (amyloid beta 1-55)
Descriptor: D3 all D-enantimeric peptide, Isoform L-APP677 of Amyloid-beta precursor protein
Authors:Bocharov, E.V, Volynsky, P.E, Okhrimenko, I.S, Urban, A.S.
Deposit date:2020-12-01
Release date:2021-01-13
Last modified:2021-12-08
Method:SOLUTION NMR
Cite:All - d - Enantiomeric Peptide D3 Designed for Alzheimer's Disease Treatment Dynamically Interacts with Membrane-Bound Amyloid-beta Precursors.
J.Med.Chem., 64, 2021
7JXO
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Triangular trimer of beta-hairpins derived from Abeta17-36 with an F20Cha mutation
Descriptor: Amyloid-beta 17-36 peptide
Authors:Kreutzer, A.G, Haerianardakani, S, Nowick, J.S.
Deposit date:2020-08-27
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Phenylalanine Mutation to Cyclohexylalanine Facilitates Triangular Trimer Formation by beta-Hairpins Derived from A beta.
J.Am.Chem.Soc., 142, 2020
6WXM
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BU of 6wxm by Molmil
X-ray crystallographic structure of a beta-hairpin peptide derived from amyloid beta 16-36
Descriptor: Amyloid-beta protein, HEXANE-1,6-DIOL
Authors:Kreutzer, A.G, Nowick, J.S.
Deposit date:2020-05-11
Release date:2020-07-08
Last modified:2020-08-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray Crystallography Reveals Parallel and Antiparallel beta-Sheet Dimers of a beta-Hairpin Derived from A beta16-36that Assemble to Form Different Tetramers.
Acs Chem Neurosci, 11, 2020
8EZE
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Brain-derived 42-residue amyloid-beta fibril type B
Descriptor: Beta-amyloid protein 42
Authors:Tycko, R, Lee, M, Yau, Y.-M, Louis, J.M.
Deposit date:2022-10-31
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structures of brain-derived 42-residue amyloid-beta fibril polymorphs with unusual molecular conformations and intermolecular interactions.
Proc.Natl.Acad.Sci.USA, 120, 2023
7O1Q
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Amyloid beta oligomer displayed on the alpha hemolysin scaffold
Descriptor: Alpha-hemolysin hybridized Abeta
Authors:Wu, J, Blum, T.B, Farrell, D.P, DiMaio, F, Abrahams, J.P, Luo, J.
Deposit date:2021-03-30
Release date:2021-04-14
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-electron Microscopy Imaging of Alzheimer's Amyloid-beta 42 Oligomer Displayed on a Functionally and Structurally Relevant Scaffold.
Angew.Chem.Int.Ed.Engl., 60, 2021
8EZD
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Brain-derived 42-residue amyloid-beta fibril type A
Descriptor: Beta-amyloid protein 42
Authors:Tycko, R, Lee, M, Yau, Y.-M, Louis, J.M.
Deposit date:2022-10-31
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structures of brain-derived 42-residue amyloid-beta fibril polymorphs with unusual molecular conformations and intermolecular interactions.
Proc.Natl.Acad.Sci.USA, 120, 2023

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