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PDB: 27201 results

5K5M
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Co-Crystal Structure of Dengue Virus Serotype 2 RNA Dependent RNA Polymerase with Compound 27
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-2,4-dimethoxy-N-[(3-methoxyphenyl)sulfonyl]benzamide, RNA Dependent RNA Polymerase, ...
Authors:Arora, R, Benson, T.E.
Deposit date:2016-05-23
Release date:2016-08-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling.
Plos Pathog., 12, 2016
5KEF
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BU of 5kef by Molmil
Structure of hypothetical Staphylococcus protein SA0856 with zinc
Descriptor: ACETATE ION, PhnB protein, ZINC ION
Authors:Battaile, K.P, Chirgadze, Y.N, Lam, R, Chan, T, Mihajlovic, V, Romanov, V, Pai, E, Mendez, V, Chirgadze, N.Y.
Deposit date:2016-06-09
Release date:2017-01-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structure of Staphylococcus aureus Zn-glyoxalase I: new subfamily of glyoxalase I family.
J. Biomol. Struct. Dyn., 36, 2018
6W1X
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BU of 6w1x by Molmil
Cryo-EM structure of anti-CRISPR AcrIF9, bound to the type I-F crRNA-guided CRISPR surveillance complex
Descriptor: CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, CRISPR-associated protein Csy3, ...
Authors:Hirschi, M, Santiago-Frangos, A, Wilkinson, R, Golden, S.M, Wiedenheft, B, Lander, G.
Deposit date:2020-03-04
Release date:2020-05-13
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:AcrIF9 tethers non-sequence specific dsDNA to the CRISPR RNA-guided surveillance complex.
Nat Commun, 11, 2020
6W2E
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BU of 6w2e by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
Deposit date:2020-03-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
5K8R
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BU of 5k8r by Molmil
Structure of human clustered protocadherin gamma B3 EC1-4
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Nicoludis, J.M, Vogt, B.E, Gaudet, R.
Deposit date:2016-05-30
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Antiparallel protocadherin homodimers use distinct affinity- and specificity-mediating regions in cadherin repeats 1-4.
Elife, 5, 2016
4JXK
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BU of 4jxk by Molmil
Crystal Structure of Oxidoreductase ROP_24000 (Target EFI-506400) from Rhodococcus opacus B4
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, oxidoreductase
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-03-28
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Oxidoreductase Rop_24000 (Target EFI-506400) from Rhodococcus Opacus
To be Published
4JXY
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BU of 4jxy by Molmil
CRYSTAL STRUCTURE OF POLYPRENYL SYNTHASE PATL_3739 (TARGET EFI-509195) FROM Pseudoalteromonas atlantica
Descriptor: GLUTARIC ACID, PHOSPHATE ION, Trans-hexaprenyltranstransferase
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-03-28
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:CRYSTAL STRUCTURE OF ISOPRENOID SYNTHASE PATL_3739 FROM Pseudoalteromonas atlantica
To be Published
6WGB
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BU of 6wgb by Molmil
Crystal structure of the fab portion of dupilumab
Descriptor: Dupilumab Fab heavy chain, Dupilumab Fab light chain
Authors:Druzina, Z, Atwell, S, Pustilnik, A, Antonysamy, S, Ho, C, Lieu, R, Hendle, J, Benach, J, Wang, J.
Deposit date:2020-04-05
Release date:2020-09-16
Last modified:2020-09-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Rapid and robust antibody Fab fragment crystallization utilizing edge-to-edge beta-sheet packing.
Plos One, 15, 2020
6WZG
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BU of 6wzg by Molmil
Human secretin receptor Gs complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Piper, S.J, Belousoff, M.J, Danev, R.
Deposit date:2020-05-13
Release date:2020-08-12
Last modified:2020-09-02
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structure and dynamics of the active Gs-coupled human secretin receptor.
Nat Commun, 11, 2020
5KE4
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BU of 5ke4 by Molmil
Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) containing loop C from the human alpha 6 nicotinic acetylcholine receptor in complex with 2-((5-(3,7-Diazabicyclo[3.3.1]nonan-3-yl)pyridin-3-yl)oxy)- N,N-dimethylethanamine (BPC)
Descriptor: 2-((5-(3,7-Diazabicyclo[3.3.1]nonan-3-yl)pyridin-3-yl)oxy)-N,N-dimethylethanamine, Soluble acetylcholine receptor
Authors:Bobango, J, Wu, J, Talley, I.T, Ralston, R, Sankaran, B, Talley, T.T.
Deposit date:2016-06-09
Release date:2016-07-06
Method:X-RAY DIFFRACTION (2.554 Å)
Cite:Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) containing loop C from the human alpha 6 nicotinic acetylcholine receptor in complex with 2-((5-(3,7-Diazabicyclo[3.3.1]nonan-3-yl)pyridin-3-yl)oxy)- N,N-dimethylethanamine (BPC)
To Be Published
6X5H
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BU of 6x5h by Molmil
Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP
Descriptor: 1,2-ETHANEDIOL, Alpha-(1,6)-fucosyltransferase, GLYCEROL, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-05-26
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases.
J.Biol.Chem., 295, 2020
1BOH
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BU of 1boh by Molmil
SULFUR-SUBSTITUTED RHODANESE (ORTHORHOMBIC FORM)
Descriptor: RHODANESE
Authors:Gliubich, F, Berni, R, Cianci, M, Trevino, R.J, Horowitz, P.M, Zanotti, G.
Deposit date:1998-08-04
Release date:1999-04-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:NH2-terminal sequence truncation decreases the stability of bovine rhodanese, minimally perturbs its crystal structure, and enhances interaction with GroEL under native conditions.
J.Biol.Chem., 274, 1999
6WKP
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BU of 6wkp by Molmil
Crystal structure of RNA-binding domain of nucleocapsid phosphoprotein from SARS CoV-2, monoclinic crystal form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Nucleoprotein, ZINC ION
Authors:Chang, C, Michalska, K, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Kim, Y, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-16
Release date:2020-04-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Epitopes recognition of SARS-CoV-2 nucleocapsid RNA binding domain by human monoclonal antibodies.
Iscience, 27, 2024
7Y4N
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BU of 7y4n by Molmil
Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos
Descriptor: Growth factor receptor-bound protein 2
Authors:Pooppadi, M.S, Ikeya, T, Sugasawa, H, Watanabe, R, Mishima, M, Inomata, K, Ito, Y.
Deposit date:2022-06-15
Release date:2022-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos.
Biochem.Biophys.Res.Commun., 625, 2022
6WGQ
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BU of 6wgq by Molmil
The crystal structure of a beta-lactamase from Shigella flexneri 2a str. 2457T
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Tan, K, Wu, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-06
Release date:2020-04-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of a beta-lactamase from Shigella flexneri 2a str. 2457T
To Be Published
6WH7
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BU of 6wh7 by Molmil
Capsid structure of Penaeus monodon metallodensovirus following EDTA treatment
Descriptor: Penaeus monodon metallodensovirus major capsid protein
Authors:Penzes, J.J, Pham, H.T, Chipman, P, Bhattacharya, N, McKenna, R, Agbandje-McKenna, M, Tijssen, P.
Deposit date:2020-04-07
Release date:2020-04-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Molecular biology and structure of a novel penaeid shrimp densovirus elucidate convergent parvoviral host capsid evolution.
Proc.Natl.Acad.Sci.USA, 117, 2020
6WMM
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BU of 6wmm by Molmil
Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-04-21
Release date:2020-12-02
Last modified:2021-04-28
Method:X-RAY DIFFRACTION (1.548 Å)
Cite:Comparison of human poly-N-acetyl-lactosamine synthase structure with GT-A fold glycosyltransferases supports a modular assembly of catalytic subsites.
J.Biol.Chem., 296, 2020
6WO0
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BU of 6wo0 by Molmil
human Artemis/SNM1C catalytic domain, crystal form 1
Descriptor: GLYCEROL, Protein artemis, ZINC ION
Authors:Karim, F, Liu, S, Laciak, A.R, Volk, L, Rosenblum, M, Curtis, R, Huang, N, Carr, G, Zhu, G.
Deposit date:2020-04-23
Release date:2020-07-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural analysis of the catalytic domain of Artemis endonuclease/SNM1C reveals distinct structural features.
J.Biol.Chem., 295, 2020
6WT5
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BU of 6wt5 by Molmil
Structure of a bacterial STING receptor from Capnocytophaga granulosa
Descriptor: Bacterial STING
Authors:Morehouse, B.R, Govande, A.A, Millman, A, Keszei, A.F.A, Lowey, B, Ofir, G, Shao, S, Sorek, R, Kranzusch, P.J.
Deposit date:2020-05-01
Release date:2020-09-09
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:STING cyclic dinucleotide sensing originated in bacteria.
Nature, 586, 2020
1BMF
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BU of 1bmf by Molmil
BOVINE MITOCHONDRIAL F1-ATPASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BOVINE MITOCHONDRIAL F1-ATPASE, MAGNESIUM ION, ...
Authors:Abrahams, J.P, Leslie, A.G.W, Lutter, R, Walker, J.E.
Deposit date:1996-03-13
Release date:1996-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria.
Nature, 370, 1994
6WY4
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BU of 6wy4 by Molmil
Crystal Structure of Wild Type Class D beta-lactamase from Clostridium difficile 630
Descriptor: Beta-lactamase, DI(HYDROXYETHYL)ETHER, SODIUM ION
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Rosas-Lemus, M, Jedrzejczak, R, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-05-12
Release date:2020-05-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Wild Type Class D beta-lactamase from Clostridium difficile 630
To Be Published
6WGL
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BU of 6wgl by Molmil
Dupilumab fab with Crystal Kappa design complexed with human IL-4 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Dupilumab Fab heavy chain, ...
Authors:Druzina, Z, Atwell, S, Pustilnik, A, Antonysamy, S, Ho, C, Lieu, R, Hendle, J, Benach, J, Wang, J.
Deposit date:2020-04-05
Release date:2020-09-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Rapid and robust antibody Fab fragment crystallization utilizing edge-to-edge beta-sheet packing.
Plos One, 15, 2020
5KGL
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BU of 5kgl by Molmil
2.45A resolution structure of Apo independent phosphoglycerate mutase from C. elegans (orthorhombic form)
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, CHLORIDE ION, MANGANESE (II) ION, ...
Authors:Lovell, S, Mehzabeen, N, Battaile, K.P, Yu, H, Dranchak, P, MacArthur, R, Li, Z, Carlow, T, Suga, H, Inglese, J.
Deposit date:2016-06-13
Release date:2017-04-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Macrocycle peptides delineate locked-open inhibition mechanism for microorganism phosphoglycerate mutases.
Nat Commun, 8, 2017
5KH7
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BU of 5kh7 by Molmil
Crystal structure of fragment (3-[6-Oxo-3-(3-pyridinyl)-1(6H)-pyridazinyl]propanoic acid) bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Descriptor: 3-(6-oxidanylidene-3-pyridin-3-yl-pyridazin-1-yl)propanoic acid, Histone deacetylase 6, UNKNOWN ATOM OR ION, ...
Authors:Harding, R.J, Walker, J, Ravichandran, M, Ferreira de Freitas, R, Schapira, M, Bountra, C, Edwards, A.M, Santhakumar, V, Arrowsmith, C.M, Structural Genomics Consortium (SGC)
Deposit date:2016-06-14
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin.
J. Med. Chem., 60, 2017
6WGK
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BU of 6wgk by Molmil
Fab portion of dupilumab with Crystal Kappa design and intrachain disulfide
Descriptor: Dupilumab Fab heavy chain, Dupilumab Fab light chain
Authors:Druzina, Z, Atwell, S, Pustilnik, A, Antonysamy, S, Ho, C, Lieu, R, Hendle, J, Benach, J, Wang, J.
Deposit date:2020-04-05
Release date:2020-09-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Rapid and robust antibody Fab fragment crystallization utilizing edge-to-edge beta-sheet packing.
Plos One, 15, 2020

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