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PDB: 98 results

6PEW
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BU of 6pew by Molmil
CryoEM Plasmodium falciparum glutamine synthetase
Descriptor: Glutamine synthetase
Authors:Ho, C.M, Lai, M, Zhou, Z.H.
Deposit date:2019-06-21
Release date:2019-12-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Bottom-up structural proteomics: cryoEM of protein complexes enriched from the cellular milieu.
Nat.Methods, 17, 2020
6PEV
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BU of 6pev by Molmil
CryoEM Plasmodium falciparum M18 aspartyl aminopeptidase
Descriptor: M18 aspartyl aminopeptidase, ZINC ION
Authors:Ho, C, Lai, M, Zhou, Z.H.
Deposit date:2019-06-21
Release date:2019-12-11
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Bottom-up structural proteomics: cryoEM of protein complexes enriched from the cellular milieu.
Nat.Methods, 17, 2020
3WX4
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BU of 3wx4 by Molmil
CRYSTAL STRUCTURE of T4 PHAGE ARN PROTEIN
Descriptor: Anti-restriction endonuclease
Authors:Ho, C.H, Wang, H.C, Ko, T.P, Wang, A.H.J.
Deposit date:2014-07-16
Release date:2014-08-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The T4 phage DNA mimic protein Arn inhibits the DNA binding activity of the bacterial histone-like protein H-NS
J.Biol.Chem., 289, 2014
6E10
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BU of 6e10 by Molmil
PTEX Core Complex in the Engaged (Extended) State
Descriptor: Endogenous cargo polypeptide, Exported protein 2, Heat shock protein 101, ...
Authors:Ho, C, Lai, M, Zhou, Z.H.
Deposit date:2018-07-08
Release date:2018-08-22
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Malaria parasite translocon structure and mechanism of effector export.
Nature, 561, 2018
6E11
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BU of 6e11 by Molmil
PTEX Core Complex in the Resetting (Compact) State
Descriptor: Endogenous cargo polypeptide, Exported protein 2, Heat shock protein 101, ...
Authors:Ho, C, Lai, M, Zhou, Z.H.
Deposit date:2018-07-08
Release date:2018-08-22
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (4.23 Å)
Cite:Malaria parasite translocon structure and mechanism of effector export.
Nature, 561, 2018
7D20
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BU of 7d20 by Molmil
Cryo-EM structure of SET8-CENP-A-nucleosome complex
Descriptor: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Ho, C.-H, Takizawa, Y, Kobayashi, W, Arimura, Y, Kurumizaka, H.
Deposit date:2020-09-15
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase.
Life Sci Alliance, 4, 2021
7D1Z
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BU of 7d1z by Molmil
Cryo-EM structure of SET8-nucleosome complex
Descriptor: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Ho, C.-H, Takizawa, Y, Kobayashi, W, Arimura, Y, Kurumizaka, H.
Deposit date:2020-09-15
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase.
Life Sci Alliance, 4, 2021
1S68
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BU of 1s68 by Molmil
Structure and Mechanism of RNA Ligase
Descriptor: ADENOSINE MONOPHOSPHATE, RNA Ligase 2
Authors:Ho, C.K, Wang, L.K, Lima, C.D, Shuman, S.
Deposit date:2004-01-22
Release date:2004-02-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of RNA ligase.
Structure, 12, 2004
4PDS
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BU of 4pds by Molmil
Crystal structure of Rad53 kinase domain and SCD2 in complex with AMPPNP
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase RAD53
Authors:Ho, C.S, Wybenga-Groot, L.E, Ceccarelli, D.F, Sicheri, F.
Deposit date:2014-04-21
Release date:2014-05-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of Rad53 kinase activation by dimerization and activation segment exchange.
Cell Signal., 26, 2014
7MRW
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BU of 7mrw by Molmil
Native RhopH complex of the malaria parasite Plasmodium falciparum
Descriptor: Cytoadherence linked asexual protein 3.1, High molecular weight rhoptry protein 2, High molecular weight rhoptry protein 3
Authors:Ho, C.M, Jih, J, Lai, M, Li, X.R, Goldberg, D.E, Beck, J.R, Zhou, Z.H.
Deposit date:2021-05-10
Release date:2021-09-15
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Native structure of the RhopH complex, a key determinant of malaria parasite nutrient acquisition.
Proc.Natl.Acad.Sci.USA, 118, 2021
3KB2
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BU of 3kb2 by Molmil
Crystal Structure of YorR protein in complex with phosphorylated GDP from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR256
Descriptor: GUANOSINE-3'-MONOPHOSPHATE-5'-DIPHOSPHATE, MAGNESIUM ION, SPBc2 prophage-derived uncharacterized protein yorR
Authors:Forouhar, F, Friedman, D, Seetharaman, J, Janjua, J, Xiao, R, Cunningham, K, Ma, L, Ho, C, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-20
Release date:2009-10-27
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Northeast Structural Genomics Consortium Target SR256
To be Published
4LLD
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BU of 4lld by Molmil
Structure of wild-type IgG1 antibody heavy chain constant domain 1 and light chain lambda constant domain (IgG1 CH1:Clambda) at 1.19A
Descriptor: Ig gamma-1 chain C region, Ig lambda-2 chain C region
Authors:Pustilnik, A, Lewis, S.M, Wu, X, Sereno, A, Huang, F, Guntas, G, Leaver-Fay, A, Smith, E.M, Ho, C, Hansen-Estruch, C, Chamberlain, A.K, Truhlar, S.M, Kuhlman, B, Demarest, S.J, Atwell, S.
Deposit date:2013-07-09
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Generation of bispecific IgG antibodies by structure-based design of an orthogonal Fab interface.
Nat.Biotechnol., 32, 2014
4LLM
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BU of 4llm by Molmil
Structure of redesigned IgG1 first constant and lambda domains (CH1:Clambda constant redesign 1, CRD1) at 1.75A
Descriptor: Ig gamma-1 chain C region, Ig lambda-2 chain C region
Authors:Pustilnik, A, Lewis, S.M, Wu, X, Sereno, A, Huang, F, Guntas, G, Leaver-Fay, A, Smith, E.M, Ho, C, Hansen-Estruch, C, Chamberlain, A.K, Truhlar, S.M, Kuhlman, B, Demarest, S.J, Atwell, S.
Deposit date:2013-07-09
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Generation of bispecific IgG antibodies by structure-based design of an orthogonal Fab interface.
Nat.Biotechnol., 32, 2014
4LLY
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BU of 4lly by Molmil
Crystal structure of Pertuzumab Clambda Fab with variable and constant domain redesigns (VRD2 and CRD2) at 1.6A
Descriptor: GLYCEROL, MAGNESIUM ION, light chain Clambda, ...
Authors:Pustilnik, A, Lewis, S.M, Wu, X, Sereno, A, Huang, F, Guntas, G, Leaver-Fay, A, Smith, E.M, Ho, C, Hansen-Estruch, C, Chamberlain, A.K, Truhlar, S.M, Kuhlman, B, Demarest, S.J, Atwell, S.
Deposit date:2013-07-09
Release date:2014-01-29
Last modified:2019-06-26
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Generation of bispecific IgG antibodies by structure-based design of an orthogonal Fab interface.
Nat.Biotechnol., 32, 2014
4LLU
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BU of 4llu by Molmil
Structure of Pertuzumab Fab with light chain Clambda at 2.16A
Descriptor: ACETATE ION, Light chain CLAMBDA, PERTUZUMAB FAB Heavy chain, ...
Authors:Pustilnik, A, Lewis, S.M, Wu, X, Sereno, A, Huang, F, Guntas, G, Leaver-Fay, A, Smith, E.M, Ho, C, Hansen-Estruch, C, Chamberlain, A.K, Truhlar, S.M, Kuhlman, B, Demarest, S.J, Atwell, S.
Deposit date:2013-07-09
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Generation of bispecific IgG antibodies by structure-based design of an orthogonal Fab interface.
Nat.Biotechnol., 32, 2014
4LLQ
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BU of 4llq by Molmil
Structure of redesigned IgG1 first constant and lambda domains (CH1:Clambda constant redesign 2 beta, CRD2b) at 1.42A
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, mutated CH1, mutated light chain Clambda
Authors:Pustilnik, A, Lewis, S.M, Wu, X, Sereno, A, Huang, F, Guntas, G, Leaver-Fay, A, Smith, E.M, Ho, C, Hansen-Estruch, C, Chamberlain, A.K, Truhlar, S.M, Kuhlman, B, Demarest, S.J, Atwell, S.
Deposit date:2013-07-09
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Generation of bispecific IgG antibodies by structure-based design of an orthogonal Fab interface.
Nat.Biotechnol., 32, 2014
2KEW
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BU of 2kew by Molmil
The solution structure of Bacillus subtilis SR211 START domain by NMR spectroscopy
Descriptor: Uncharacterized protein yndB
Authors:Mercier, K.A, Mueller, G.A, Powers, R, Acton, T.B, Ciano, M, Ho, C, Lui, J, Ma, L, Rost, B, Rossi, R, Xiao, R, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-02-05
Release date:2009-03-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:(1)H, (13)C, and (15)N NMR assignments for the Bacillus subtilis yndB START domain.
Biomol.Nmr Assign., 3, 2009
1RVW
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BU of 1rvw by Molmil
R STATE HUMAN HEMOGLOBIN [ALPHA V96W], CARBONMONOXY
Descriptor: CARBON MONOXIDE, HEMOGLOBIN, PHOSPHATE ION, ...
Authors:Puius, Y.A, Zou, M, Ho, N.T, Ho, C, Almo, S.C.
Deposit date:1997-03-20
Release date:1998-03-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Novel water-mediated hydrogen bonds as the structural basis for the low oxygen affinity of the blood substitute candidate rHb(alpha 96Val-->Trp).
Biochemistry, 37, 1998
3HD6
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BU of 3hd6 by Molmil
Crystal Structure of the Human Rhesus Glycoprotein RhCG
Descriptor: Ammonium transporter Rh type C, octyl beta-D-glucopyranoside
Authors:Gruswitz, F, Chaudhary, S, Ho, J.D, Pezeshki, B, Ho, C.-M, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2009-05-06
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Function of human Rh based on structure of RhCG at 2.1 A.
Proc.Natl.Acad.Sci.USA, 107, 2010
1VWT
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BU of 1vwt by Molmil
T STATE HUMAN HEMOGLOBIN [ALPHA V96W], ALPHA AQUOMET, BETA DEOXY
Descriptor: HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Puius, Y.A, Zou, M, Ho, N.T, Ho, C, Almo, S.C.
Deposit date:1997-03-20
Release date:1998-03-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Novel water-mediated hydrogen bonds as the structural basis for the low oxygen affinity of the blood substitute candidate rHb(alpha 96Val-->Trp).
Biochemistry, 37, 1998
2KTE
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BU of 2kte by Molmil
The solution structure of Bacillus subtilis, YndB, Northeast Structural Genomics Consoritum Target SR211
Descriptor: Uncharacterized protein yndB
Authors:Mercier, K.A, Mueller, G.A, Powers, R, Acton, T.B, Ciano, M, Ho, C, Lui, J, Ma, L, Rost, B, Rossi, R, Montelione, G.T, Xiao, R, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-29
Release date:2010-06-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and function of YndB, an AHSA1 protein from Bacillus subtilis.
Proteins, 78, 2010
8TPU
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BU of 8tpu by Molmil
Subtomogram averaged consensus structure of the malarial 80S ribosome in Plasmodium falciparum-infected human erythrocytes
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Anton, L, Cheng, W, Zhu, X, Ho, C.M.
Deposit date:2023-08-05
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Divergent translational landscape reflects adaptation to biased codon usage in malaria parasites
To Be Published
4CCL
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BU of 4ccl by Molmil
X-Ray structure of E. coli ycfD
Descriptor: 50S RIBOSOMAL PROTEIN L16 ARGININE HYDROXYLASE, MANGANESE (II) ION, SULFATE ION
Authors:McDonough, M.A, Ho, C.H, Kershaw, N.J, Schofield, C.J.
Deposit date:2013-10-23
Release date:2014-04-30
Last modified:2020-06-03
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Ribosomal oxygenases are structurally conserved from prokaryotes to humans.
Nature, 510, 2014
2FFG
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BU of 2ffg by Molmil
Novel x-ray structure of the YkuJ protein from Bacillus subtilis. Northeast Structural Genomics target SR360.
Descriptor: ykuJ
Authors:Kuzin, A.P, Abashidze, M, Forouhar, F, Vorobiev, S.M, Ho, C.K, Janjua, H, Cunningham, K, Conover, K, Ma, L.C, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-12-19
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Novel x-ray structure of the YkuJ protein from Bacillus subtilis. Northeast Structural Genomics target SR360.
To be Published
2BDR
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Crystal Structure of the Putative Ureidoglycolate hydrolase PP4288 from Pseudomonas putida, Northeast Structural Genomics Target PpR49
Descriptor: SODIUM ION, Ureidoglycolate hydrolase
Authors:Forouhar, F, Abashidze, M, Jayaraman, S, Ho, C.K, Conover, K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-10-20
Release date:2005-11-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Putative Ureidoglycolate hydrolase PP4288 from Pseudomonas putida, Northeast Structural Genomics Target PpR49
To be Published

 

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