Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 729 results

4WIW
DownloadVisualize
BU of 4wiw by Molmil
Crystal structure of C-terminal domain of putative chitinase from Desulfitobacterium hafniense DCB-2
Descriptor: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Chang, C, Tesar, C, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-26
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.637 Å)
Cite:Crystal structure of C-terminal domain of putative chitinase from Desulfitobacterium hafniense DCB-2
To Be Published
4WHI
DownloadVisualize
BU of 4whi by Molmil
Crystal structure of C-terminal domain of penicillin binding protein Rv0907
Descriptor: BROMIDE ION, Beta-lactamase, NICKEL (II) ION
Authors:Chang, C, Hatzos-Skintges, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of C-terminal domain of penicillin binding protein Rv0907
To Be Published
1BC4
DownloadVisualize
BU of 1bc4 by Molmil
THE SOLUTION STRUCTURE OF A CYTOTOXIC RIBONUCLEASE FROM THE OOCYTES OF RANA CATESBEIANA (BULLFROG), NMR, 15 STRUCTURES
Descriptor: RIBONUCLEASE
Authors:Chang, C.-F, Chen, C, Chen, Y.-C, Hom, K, Huang, R.-F, Huang, T.
Deposit date:1998-05-05
Release date:1998-10-14
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:The solution structure of a cytotoxic ribonuclease from the oocytes of Rana catesbeiana (bullfrog).
J.Mol.Biol., 283, 1998
4WER
DownloadVisualize
BU of 4wer by Molmil
Crystal structure of diacylglycerol kinase catalytic domain protein from Enterococcus faecalis V583
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Diacylglycerol kinase catalytic domain protein
Authors:Chang, C, Clancy, S, Hatzos-Skintges, C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-10
Release date:2014-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of diacylglycerol kinase catalytic domain protein from Enterococcus faecalis V583
To Be Published
4W9R
DownloadVisualize
BU of 4w9r by Molmil
Crystal structure of uncharacterised protein Coch_1243 from Capnocytophaga ochracea DSM 7271
Descriptor: ACETATE ION, GLYCEROL, Uncharacterized protein
Authors:Chang, C, Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-27
Release date:2014-09-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Crystal structure of uncharacterised protein Coch_1243 from Capnocytophaga ochracea DSM 7271
To Be Published
4W66
DownloadVisualize
BU of 4w66 by Molmil
Crystal structure of Glutathione S-transferase domain protein from Haliangium ochraceum DSM 14365
Descriptor: GLUTATHIONE, Glutathione S-transferase domain protein
Authors:Chang, C, Chhor, G, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-20
Release date:2014-09-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of Glutathione S-transferase domain protein from Haliangium ochraceum DSM 14365
To Be Published
8J9V
DownloadVisualize
BU of 8j9v by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8TTP
DownloadVisualize
BU of 8ttp by Molmil
Crystal structure of class C beta-lactamase from Escherichia coli in complex with avibactam
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, Beta-lactamase, ...
Authors:Chang, C, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-08-14
Release date:2023-09-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of class C beta-lactamase from Escherichia coli in complex with avibactam
to be published
8J9W
DownloadVisualize
BU of 8j9w by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*AP*AP*GP*AP*AP*CP*TP*CP*TP*GP*TP*AP*G)-3'), DNA (5'-D(*CP*AP*TP*GP*CP*TP*AP*CP*AP*GP*AP*GP*TP*TP*CP*TP*T)-3'), ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J9X
DownloadVisualize
BU of 8j9x by Molmil
Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Descriptor: DNA (5'-D(*GP*AP*GP*GP*TP*AP*TP*GP*TP*AP*GP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*CP*GP*CP*CP*TP*AP*CP*AP*TP*AP*CP*CP*TP*C)-3'), DNA topoisomerase 2, ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8JA1
DownloadVisualize
BU of 8ja1 by Molmil
ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+ (oxidized form)
Descriptor: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Chang, C.-W, Pang, A.H, Tsai, M.-D.
Deposit date:2023-05-05
Release date:2024-02-07
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8B
DownloadVisualize
BU of 8j8b by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8A
DownloadVisualize
BU of 8j8a by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J89
DownloadVisualize
BU of 8j89 by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J8C
DownloadVisualize
BU of 8j8c by Molmil
Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J88
DownloadVisualize
BU of 8j88 by Molmil
Asfv topoisomerase 2 - apo conformer Ib
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8J87
DownloadVisualize
BU of 8j87 by Molmil
Asfv topoisomerase 2 - apo conformer Ia
Descriptor: DNA topoisomerase 2
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-05-01
Release date:2024-02-07
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:A unified view on enzyme catalysis by cryo-EM study of a DNA topoisomerase.
Commun Chem, 7, 2024
8E86
DownloadVisualize
BU of 8e86 by Molmil
Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mn2+
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*AP*TP*TP*GP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, ...
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8E8K
DownloadVisualize
BU of 8e8k by Molmil
Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*AP*TP*TP*GP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, ...
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8E87
DownloadVisualize
BU of 8e87 by Molmil
Human DNA polymerase eta-DNA-rA-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*AP*TP*TP*TP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, ...
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8E89
DownloadVisualize
BU of 8e89 by Molmil
Human DNA polymerase eta-DNA-rU-ended primer-binary complex
Descriptor: DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, DNA/RNA (5'-D(*AP*GP*CP*GP*TP*CP*A)-R(P*U)-3')
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8E8A
DownloadVisualize
BU of 8e8a by Molmil
Human DNA polymerase eta-DNA-dT-ended primer binary complex
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8E88
DownloadVisualize
BU of 8e88 by Molmil
Human DNA polymerase eta-DNA-rU-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, ...
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8E8G
DownloadVisualize
BU of 8e8g by Molmil
Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 180s
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8E8E
DownloadVisualize
BU of 8e8e by Molmil
Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 90s
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon