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PDB: 167 results
4WMA
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BU of 4wma by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese,acceptor ligand and UDP-Glucose
Descriptor: Coagulation factor IX, MANGANESE (II) ION, SULFATE ION, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-08
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WN2
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BU of 4wn2 by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese, product ligand and UDP (Product complex III)
Descriptor: Coagulation factor IX, MANGANESE (II) ION, SULFATE ION, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-10
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WM0
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BU of 4wm0 by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with acceptor ligand
Descriptor: Coagulation factor IX, Xyloside xylosyltransferase 1, alpha-D-xylopyranose-(1-3)-beta-D-glucopyranose
Authors:Yu, H, Li, H.
Deposit date:2014-10-08
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WNH
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BU of 4wnh by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese,acceptor ligand and UDP-Xylose
Descriptor: Coagulation factor IX, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-11
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese,acceptor ligand and UDP-Xylose
To Be Published
6U8Y
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BU of 6u8y by Molmil
Structure of the membrane-bound sulfane sulfur reductase (MBS), an archaeal respiratory membrane complex
Descriptor: DUF4040 domain-containing protein, IRON/SULFUR CLUSTER, Monovalent cation/H+ antiporter subunit B, ...
Authors:Yu, H.J, Li, H.L.
Deposit date:2019-09-06
Release date:2020-09-09
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of the respiratory MBS complex reveals iron-sulfur cluster catalyzed sulfane sulfur reduction in ancient life.
Nat Commun, 11, 2020
2CCD
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BU of 2ccd by Molmil
Crystal structure of the catalase-peroxidase (KatG) and S315T mutant from Mycobacterium tuberculosis
Descriptor: PEROXIDASE/CATALASE T, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yu, H, Sacchettini, J.C.
Deposit date:2006-01-16
Release date:2006-01-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Hydrogen Peroxide-Mediated Isoniazid Activation Catalyzed by Mycobacterium Tuberculosis Catalase- Peroxidase (Katg) and its S315T Mutant.
Biochemistry, 45, 2006
2CCA
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BU of 2cca by Molmil
Crystal structure of the catalase-peroxidase (KatG) and S315T mutant from Mycobacterium tuberculosis
Descriptor: PEROXIDASE/CATALASE T, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yu, H, Sacchettini, J.C.
Deposit date:2006-01-16
Release date:2006-01-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Hydrogen Peroxide-Mediated Isoniazid Activation Catalyzed by Mycobacterium Tuberculosis Catalase-Peroxidase (Katg) and its S315T Mutant.
Biochemistry, 45, 2006
6DJV
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BU of 6djv by Molmil
Mtb ClpB in complex with ATPgammaS and casein, Conformer 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Yu, H.J, Li, H.L.
Deposit date:2018-05-26
Release date:2018-09-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:ATP hydrolysis-coupled peptide translocation mechanism ofMycobacterium tuberculosisClpB.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6DJU
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BU of 6dju by Molmil
Mtb ClpB in complex with ATPgammaS and casein, Conformer 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Yu, H.J, Li, H.L.
Deposit date:2018-05-26
Release date:2018-09-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:ATP hydrolysis-coupled peptide translocation mechanism ofMycobacterium tuberculosisClpB.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6ED3
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BU of 6ed3 by Molmil
Mtb ClpB in complex with AMPPNP
Descriptor: Chaperone protein ClpB
Authors:Yu, H.J, Li, H.L.
Deposit date:2018-08-08
Release date:2018-09-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:ATP hydrolysis-coupled peptide translocation mechanism ofMycobacterium tuberculosisClpB.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1FWQ
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BU of 1fwq by Molmil
SOLUTION STRUCTURE OF HUMAN MSS4, A GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR RAB PROTEINS
Descriptor: GUANINE NUCLEOTIDE EXCHANGE FACTOR, ZINC ION
Authors:Yu, H, Schreiber, S.L.
Deposit date:2000-09-24
Release date:2000-10-04
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of guanine-nucleotide-exchange factor human Mss4 and identification of its Rab-interacting surface.
Nature, 376, 1995
1SRM
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BU of 1srm by Molmil
1H AND 15N ASSIGNMENTS AND SECONDARY STRUCTURE OF THE SRC SH3 DOMAIN
Descriptor: SRC TYROSINE KINASE SH3 DOMAIN
Authors:Yu, H, Rosen, M.K, Shin, T.B, Seidel-Dugan, C, Brugge, J.S, Schreiber, S.L.
Deposit date:1994-03-07
Release date:1994-05-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:1H and 15N assignments and secondary structure of the Src SH3 domain.
FEBS Lett., 324, 1993
1SRL
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BU of 1srl by Molmil
1H AND 15N ASSIGNMENTS AND SECONDARY STRUCTURE OF THE SRC SH3 DOMAIN
Descriptor: SRC TYROSINE KINASE SH3 DOMAIN
Authors:Yu, H, Rosen, M.K, Shin, T.B, Seidel-Dugan, C, Brugge, J.S, Schreiber, S.L.
Deposit date:1994-03-07
Release date:1994-05-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:1H and 15N assignments and secondary structure of the Src SH3 domain.
FEBS Lett., 324, 1993
4WMI
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BU of 4wmi by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese, product ligand and UDP (Product complex I)
Descriptor: Coagulation factor IX, MANGANESE (II) ION, SULFATE ION, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-09
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WLM
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BU of 4wlm by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese
Descriptor: MANGANESE (II) ION, SULFATE ION, Xyloside xylosyltransferase 1
Authors:Yu, H, Li, H.
Deposit date:2014-10-07
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WMB
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BU of 4wmb by Molmil
crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese, acceptor ligand and UDP
Descriptor: Coagulation factor IX, MANGANESE (II) ION, SULFATE ION, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-08
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WMK
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BU of 4wmk by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese, product ligand and UDP (Product complex II)
Descriptor: Coagulation factor IX, MANGANESE (II) ION, SULFATE ION, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-09
Release date:2015-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WLZ
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BU of 4wlz by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese and UDP
Descriptor: MANGANESE (II) ION, SULFATE ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-08
Release date:2015-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
4WLG
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BU of 4wlg by Molmil
crystal structure of mouse Xyloside xylosyltransferase 1, apo form
Descriptor: SULFATE ION, Xyloside xylosyltransferase 1
Authors:Yu, H, Li, H.
Deposit date:2014-10-07
Release date:2015-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
5F87
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BU of 5f87 by Molmil
Crystal structure of Drosophila Poglut1 (Rumi) complexed with UDP
Descriptor: GLYCEROL, O-glucosyltransferase rumi, URIDINE-5'-DIPHOSPHATE
Authors:Yu, H.J, Li, H.L.
Deposit date:2015-12-09
Release date:2016-07-20
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural analysis of Notch-regulating Rumi reveals basis for pathogenic mutations.
Nat. Chem. Biol., 12, 2016
5VYG
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BU of 5vyg by Molmil
Crystal structure of hFA9 EGF repeat with O-glucose trisaccharide
Descriptor: CALCIUM ION, Coagulation factor IX, alpha-D-xylopyranose-(1-3)-alpha-D-xylopyranose-(1-3)-beta-D-glucopyranose
Authors:Yu, H.J, Li, H.L.
Deposit date:2017-05-25
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:O-Glycosylation modulates the stability of epidermal growth factor-like repeats and thereby regulates Notch trafficking
J. Biol. Chem., 292, 2017
5F86
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BU of 5f86 by Molmil
Crystal structure of Drosophila Poglut1 (Rumi) complexed with its substrate protein (EGF repeat)
Descriptor: Coagulation factor IX, GLYCEROL, O-glucosyltransferase rumi, ...
Authors:Yu, H.J, Li, H.L.
Deposit date:2015-12-09
Release date:2016-07-20
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of Notch-regulating Rumi reveals basis for pathogenic mutations.
Nat. Chem. Biol., 12, 2016
5F84
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BU of 5f84 by Molmil
Crystal structure of Drosophila Poglut1 (Rumi) complexed with its glycoprotein product (glucosylated EGF repeat) and UDP
Descriptor: Coagulation factor IX, O-glucosyltransferase rumi, SULFATE ION, ...
Authors:Yu, H.J, Li, H.L.
Deposit date:2015-12-09
Release date:2016-07-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of Notch-regulating Rumi reveals basis for pathogenic mutations.
Nat. Chem. Biol., 12, 2016
5F85
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BU of 5f85 by Molmil
Crystal structure of Drosophila Poglut1 (Rumi) complexed with its substrate protein (EGF repeat) and UDP
Descriptor: Coagulation factor IX, GLYCEROL, O-glucosyltransferase rumi, ...
Authors:Yu, H.J, Li, H.L.
Deposit date:2015-12-09
Release date:2016-07-20
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of Notch-regulating Rumi reveals basis for pathogenic mutations.
Nat. Chem. Biol., 12, 2016
1OMB
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BU of 1omb by Molmil
SEQUENTIAL ASSIGNMENT AND STRUCTURE DETERMINATION OF SPIDER TOXIN OMEGA-AGA-IVB
Descriptor: OMEGA-AGA-IVB
Authors:Yu, H, Rosen, M.K, Schreiber, S.L.
Deposit date:1993-09-09
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Sequential assignment and structure determination of spider toxin omega-Aga-IVB.
Biochemistry, 32, 1993

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