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PDB: 44 results

2QMV
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High Resolution Structure of Peroxisone Proliferation-Activated Receptor gamma and Characterisation of its Interaction with the Co-activator Transcriptional Intermediary Factor 2
Descriptor: Peroxisome proliferator-activated receptor gamma
Authors:Hartl, R, Riepl, H, Kauschke, S, Kalbitzer, H.R, Maurer, T.
Deposit date:2007-07-17
Release date:2008-09-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:High Resolution Structure of Peroxisone Proliferation-Activated Receptor gamma and Characterisation of its Interaction with the Co-activator Transcriptional Intermediary Factor 2
To be Published
1PX5
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Crystal structure of the 2'-specific and double-stranded RNA-activated interferon-induced antiviral protein 2'-5'-oligoadenylate synthetase
Descriptor: 2'-5'-oligoadenylate synthetase 1, SULFATE ION
Authors:Hartmann, R, Justesen, J, Sarkar, S.N, Sen, G.C, Yee, V.C.
Deposit date:2003-07-02
Release date:2003-11-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of the 2'-specific and double-stranded RNA-activated interferon-induced antiviral protein 2'-5'-oligoadenylate synthetase
Mol.Cell, 12, 2003
2N4I
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The solution structure of Skint-1, a critical determinant of dendritic epidermal gamma-delta T cell selection
Descriptor: Selection and upkeep of intraepithelial T-cells protein 1
Authors:Salim, M, Knowles, T.J, Hart, R, Mohammed, F, Woodward, M.J, Willcox, C.R, Overduin, M, Hayday, A.C, Willcox, B.E.
Deposit date:2015-06-18
Release date:2016-03-02
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Characterization of a Putative Receptor Binding Surface on Skint-1, a Critical Determinant of Dendritic Epidermal T Cell Selection.
J.Biol.Chem., 291, 2016
4V5M
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tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
Descriptor: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Ratje, A.H, Loerke, J, Mikolajka, A, Bruenner, M, Hildebrand, P.W, Starosta, A.L, Doenhoefer, A, Connell, S.R, Fucini, P, Mielke, T, Whitford, P.C, Onuchic, J.N, Yu, Y, Sanbonmatsu, K.Y, Hartmann, R.K, Penczek, P.A, Wilson, D.N, Spahn, C.M.T.
Deposit date:2010-10-01
Release date:2014-07-09
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Head Swivel on the Ribosome Facilitates Translocation by Means of Intra-Subunit tRNA Hybrid Sites.
Nature, 468, 2010
4CVY
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Crystal structure of the M. tuberculosis sulfate ester dioxygenase Rv3406 in complex with iron.
Descriptor: DIOXYGENASE RV3406/MT3514, FE (III) ION, NITRATE ION
Authors:Neres, J, Hartkoorn, R.C, Chiarelli, L.R, Gadupudi, R, Pasca, M, Mori, G, Farina, D, Salina, S, Makarov, V, Kolly, G.S, Molteni, E, Binda, C, Dhar, N, Ferrari, S, Brodin, P, Delorme, V, Landry, V, de Jesus Lopes Ribeiro, A.L, Saxena, P, Pojer, F, Venturelli, A, Carta, A, Luciani, R, Porta, A, Zanoni, G, De Rossi, E, Costi, M.P, Riccardi, G, Cole, S.T.
Deposit date:2014-03-31
Release date:2014-12-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:2-Carboxyquinoxalines Kill Mycobacterium Tuberculosis Through Noncovalent Inhibition of Dpre1.
Acs Chem.Biol., 10, 2015
4DQU
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Mycobacterium tuberculosis InhA-D148G mutant in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Pojer, F, Hartkoorn, R.C, Boy, S, Cole, S.T.
Deposit date:2012-02-16
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Towards a new tuberculosis drug: pyridomycin - nature's isoniazid.
EMBO Mol Med, 4, 2012
4AC5
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Lipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial femtosecond crystallography
Descriptor: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
Authors:Johansson, L.C, Arnlund, D, White, T.A, Katona, G, DePonte, D.P, Weierstall, U, Doak, R.B, Shoeman, R.L, Lomb, L, Malmerberg, E, Davidsson, J, Nass, K, Liang, M, Andreasson, J, Aquila, A, Bajt, S, Barthelmess, M, Barty, A, Bogan, M.J, Bostedt, C, Bozek, J.D, Caleman, C, Coffee, R, Coppola, N, Ekeberg, T, Epp, S.W, Erk, B, Fleckenstein, H, Foucar, L, Graafsma, H, Gumprecht, L, Hajdu, J, Hampton, C.Y, Hartmann, R, Hartmann, A, Hauser, G, Hirsemann, H, Holl, P, Hunter, M.S, Kassemeyer, S, Kimmel, N, Kirian, R.A, Maia, F.R.N.C, Marchesini, S, Martin, A.V, Reich, C, Rolles, D, Rudek, B, Rudenko, A, Schlichting, I, Schulz, J, Seibert, M.M, Sierra, R, Soltau, H, Starodub, D, Stellato, F, Stern, S, Struder, L, Timneanu, N, Ullrich, J, Wahlgren, W.Y, Wang, X, Weidenspointner, G, Wunderer, C, Fromme, P, Chapman, H.N, Spence, J.C.H, Neutze, R.
Deposit date:2011-12-14
Release date:2012-02-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (8.2 Å)
Cite:Lipidic Phase Membrane Protein Serial Femtosecond Crystallography.
Nat.Methods, 9, 2012
4V5N
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tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)
Descriptor: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Ratje, A.H, Loerke, J, Mikolajka, A, Bruenner, M, Hildebrand, P.W, Starosta, A.L, Doenhoefer, A, Connell, S.R, Fucini, P, Mielke, T, Whitford, P.C, Onuchic, J.N, Yu, Y, Sanbonmatsu, K.Y, Hartmann, R.K, Penczek, P.A, Wilson, D.N, Spahn, C.M.T.
Deposit date:2010-10-21
Release date:2014-07-09
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Head Swivel on the Ribosome Facilitates Translocation by Means of Intra-Subunit tRNA Hybrid Sites.
Nature, 468, 2010
6XNE
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GCN4-p1 Peptide Trimer with p-methylphenylalanine residue at position 16 (me-F16)
Descriptor: GCN4-p1 Peptide with A16, GCN4-p1 Peptide with me-F16, MAGNESIUM ION, ...
Authors:Rowe Hartje, R.K, Czarny, R.S, Ho, A.
Deposit date:2020-07-02
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Engineering Specific Protein-Protein Interactions Through Halogen and Hydrogen Bonds
To Be Published
6XNL
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GCN4-p1 Peptide Trimer with iodo-phenylalanine residue at position 16 (IPF-F16)
Descriptor: GCN4-p1 Peptide with A16, GCN4-p1 Peptide with IPF-F16, SODIUM ION
Authors:Rowe Hartje, R.K, Czarny, R.S, Ho, A.
Deposit date:2020-07-03
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Engineering Specific Protein-Protein Interactions Through Halogen and Hydrogen Bonds
To Be Published
6XNM
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GCN4-p1 Peptide Trimer with tyrosine residue at position 16
Descriptor: GCN4-p1 peptide with A16, GCN4-p1 peptide with Y16, SODIUM ION
Authors:Rowe Hartje, R.K, Czarny, R.S, Ho, A.
Deposit date:2020-07-03
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Engineering Specific Protein-Protein Interactions Through Halogen and Hydrogen Bonds
To Be Published
6XNF
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GCN4-p1 Peptide Trimer with Tetrafluoroiodophenylalanine residue at position 16 (TFI-F16)
Descriptor: GCN4-p1 peptide with A16, GCN4-p1 peptide with TFI-F16, SODIUM ION
Authors:Rowe Hartje, R.K, Czarny, R.S, Ho, A.
Deposit date:2020-07-02
Release date:2021-07-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Engineering Specific Protein-Protein Interactions Through Halogen and Hydrogen Bonds
To Be Published
7ZGO
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Cryo-EM structure of human NKCC1 (TM domain)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHLORIDE ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Nissen, P, Fenton, R, Neumann, C, Lindtoft Rosenbaek, L, Kock Flygaard, R, Habeck, M, Lykkegaard Karlsen, J, Wang, Y, Lindorff-Larsen, K, Gad, H, Hartmann, R, Lyons, J.
Deposit date:2022-04-04
Release date:2022-10-05
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Cryo-EM structure of the human NKCC1 transporter reveals mechanisms of ion coupling and specificity.
Embo J., 41, 2022
3PCQ
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Femtosecond X-ray protein Nanocrystallography
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Chapman, H.N, Fromme, P, Barty, A, White, T.A, Kirian, R.A, Aquila, A, Hunter, M.S, Schulz, J, Deponte, D.P, Weierstall, U, Doak, R.B, Maia, F.R.N.C, Martin, A.V, Schlichting, I, Lomb, L, Coppola, N, Shoeman, R.L, Epp, S.W, Hartmann, R, Rolles, D, Rudenko, A, Foucar, L, Kimmel, N, Weidenspointner, G, Holl, P, Liang, M, Barthelmess, M, Caleman, C, Boutet, S, Bogan, M.J, Krzywinski, J, Bostedt, C, Bajt, S, Gumprecht, L, Rudek, B, Erk, B, Schmidt, C, Homke, A, Reich, C, Pietschner, D, Struder, L, Hauser, G, Gorke, H, Ullrich, J, Herrmann, S, Schaller, G, Schopper, F, Soltau, H, Kuhnel, K.-U, Messerschmidt, M, Bozek, J.D, Hau-Riege, S.P, Frank, M, Hampton, C.Y, Sierra, R, Starodub, D, Williams, G.J, Hajdu, J, Timneanu, N, Seibert, M.M, Andreasson, J, Rocker, A, Jonsson, O, Svenda, M, Stern, S, Nass, K, Andritschke, R, Schroter, C.-D, Krasniqi, F, Bott, M, Schmidt, K.E, Wang, X, Grotjohann, I, Holton, J.M, Barends, T.R.M, Neutze, R, Marchesini, S, Fromme, R, Schorb, S, Rupp, D, Adolph, M, Gorkhover, T, Andersson, I, Hirsemann, H, Potdevin, G, Graafsma, H, Nilsson, B, Spence, J.C.H.
Deposit date:2010-10-21
Release date:2011-02-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (8.984 Å)
Cite:Femtosecond X-ray protein nanocrystallography.
Nature, 470, 2011
3L9J
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Selection of a novel highly specific TNFalpha antagonist: Insight from the crystal structure of the antagonist-TNFalpha complex
Descriptor: MAGNESIUM ION, TNFalpha, Tumor necrosis factor, ...
Authors:Byla, P, Andersen, M.H, Thogersen, H.C, Gad, H.H, Hartmann, R.
Deposit date:2010-01-05
Release date:2010-02-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Selection of a novel and highly specific TNF{alpha} antagonist: insight from the crystal structure of the antagonist-TNF{alpha} complex
J.Biol.Chem., 285, 2010
3BSX
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Crystal Structure of Human Pumilio 1 in complex with Puf5 RNA
Descriptor: 5'-R(*UP*UP*GP*UP*AP*AP*UP*AP*UP*UP*A)-3', Pumilio homolog 1
Authors:Gupta, Y.K, Nair, D.T, Wharton, R.P, Aggarwal, A.K.
Deposit date:2007-12-26
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structures of human Pumilio with noncognate RNAs reveal molecular mechanisms for binding promiscuity.
Structure, 16, 2008
3PIW
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Zebrafish interferon 2
Descriptor: Type I interferon 2
Authors:Hamming, O.J, Hartmann, R, Lutfalla, G, Levraud, J.-P.
Deposit date:2010-11-08
Release date:2011-07-20
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.492 Å)
Cite:Crystal Structure of Zebrafish Interferons I and II Reveals Conservation of Type I Interferon Structure in Vertebrates.
J.Virol., 85, 2011
3PIV
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BU of 3piv by Molmil
Zebrafish interferon 1
Descriptor: Interferon, NICKEL (II) ION
Authors:Hamming, O.J, Hartmann, R, Lutfalla, G, Levraud, J.-P.
Deposit date:2010-11-08
Release date:2011-07-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.086 Å)
Cite:Crystal Structure of Zebrafish Interferons I and II Reveals Conservation of Type I Interferon Structure in Vertebrates.
J.Virol., 85, 2011
1GKG
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Structure Determination and Rational Mutagenesis reveal binding surface of immune adherence receptor, CR1 (CD35)
Descriptor: COMPLEMENT RECEPTOR TYPE 1
Authors:Smith, B.O, Mallin, R.L, Krych-Goldberg, M, Wang, X, Hauhart, R.E, Bromek, K, Uhrin, D, Atkinson, J.P, Barlow, P.N.
Deposit date:2001-08-14
Release date:2002-04-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C3B Binding Site of Cr1 (Cd35), the Immune Adherence Receptor
Cell(Cambridge,Mass.), 108, 2002
4XQ7
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The crystal structure of the OAS-like domain (OLD) of human OASL
Descriptor: 2'-5'-oligoadenylate synthase-like protein
Authors:Ibsen, M.S, Gad, H.H, Andersen, L.L, Hornung, V, Julkunen, I, Sarkar, S.N, Hartmann, R.
Deposit date:2015-01-19
Release date:2015-04-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analysis reveals that human OASL binds dsRNA to enhance RIG-I signaling.
Nucleic Acids Res., 43, 2015
1A2P
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BARNASE WILDTYPE STRUCTURE AT 1.5 ANGSTROMS RESOLUTION
Descriptor: BARNASE, ZINC ION
Authors:Martin, C, Richard, V, Salem, M, Hartley, R.W, Mauguen, Y.
Deposit date:1998-01-07
Release date:1998-04-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Refinement and structural analysis of barnase at 1.5 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
4JRT
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Crystal structure of an A-form RNA duplex containing three GU base pairs
Descriptor: RNA (5'-R(P*CP*CP*UP*GP*CP*AP*CP*UP*GP*CP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*UP*GP*GP*UP*GP*CP*GP*GP*G)-3')
Authors:Kondo, J, Dock-Bregeon, A.C, Willkomm, D.K, Hartmann, R.K, Westhof, E.
Deposit date:2013-03-21
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of an A-form RNA duplex obtained by degradation of 6S RNA in a crystallization droplet
Acta Crystallogr.,Sect.F, 69, 2013
4DTI
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BU of 4dti by Molmil
Mycobacterium tuberculosis InhA-S94A mutant in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Pojer, F, Hartkoorn, R.C, Boy, S, Cole, S.T.
Deposit date:2012-02-21
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Towards a new tuberculosis drug: pyridomycin - nature's isoniazid.
EMBO Mol Med, 4, 2012
1GKN
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Structure Determination and Rational Mutagenesis reveal binding surface of immune adherence receptor, CR1 (CD35)
Descriptor: COMPLEMENT RECEPTOR TYPE 1
Authors:Smith, B.O, Mallin, R.L, Krych-Goldberg, M, Wang, X, Hauhart, R.E, Bromek, K, Uhrin, D, Atkinson, J.P, Barlow, P.N.
Deposit date:2001-08-16
Release date:2002-04-18
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Structure of the C3B Binding Site of Cr1 (Cd35), the Immune Adherence Receptor
Cell(Cambridge,Mass.), 108, 2002
3TGX
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IL-21:IL21R complex
Descriptor: Interleukin-21, Interleukin-21 receptor, NICKEL (II) ION, ...
Authors:Hamming, O.J, Kang, L, Svenson, A, Karlsen, J.L, Rahbek-Nielsen, H, Paludan, S.R, Hjort, S.A, Bondensgaard, K, Hartmann, R.
Deposit date:2011-08-18
Release date:2012-02-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of the interleukin 21 receptor bound to interleukin 21 reveals that a sugar chain interacting with the WSXWS motif is an integral part of the interleukin 21 receptor.
J.Biol.Chem., 2012

 

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