[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,935 items for (author: park & h)

EMDB-45969:
Local refinement of the SARS-CoV-2 BA.2.86 RBD in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-45971:
Local refinement of the SARS-CoV-2 BA.2.86 NTD
Method: single particle / : Lee J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-45972:
SARS-CoV-2 BA.2.86 Spike trimer in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwp:
Local refinement of the SARS-CoV-2 BA.2.86 RBD in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwq:
Local refinement of the SARS-CoV-2 BA.2.86 NTD
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwr:
SARS-CoV-2 BA.2.86 Spike trimer in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-63533:
Cryo-EM structure of homomeric TRPC channel with agonists, class 1
Method: single particle / : Park H, Kim SH, Lee HH

EMDB-63534:
Cryo-EM structure of homomeric TRPC channel with agonists, class 2
Method: single particle / : Park H, Kim SH, Lee HH

PDB-9lzy:
Cryo-EM structure of homomeric TRPC channel with agonists, class 1
Method: single particle / : Park H, Kim SH, Lee HH

PDB-9lzz:
Cryo-EM structure of homomeric TRPC channel with agonists, class 2
Method: single particle / : Park H, Kim SH, Lee HH

EMDB-47570:
DH726-1 Fab bound to hemagglutinin from influenza A/Solomon Islands/3/2006
Method: single particle / : Finney J, Harrison SC, Walsh Jr RM, Kelsoe G

EMDB-74534:
CNGA1 channel closed state in nanodisc cGMP-free
Method: single particle / : Park T, Nimigean CM

EMDB-74535:
CNGA1 channel intermediate state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-74536:
CNGA1 channel open state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-74537:
CNGA1 channel closed state in nanodisc with brain PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

EMDB-74538:
CNGA1 channel intermediate state in nanodisc with brain PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-74539:
CNGA1 channel closed state in nanodisc with diC8-PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

EMDB-74540:
CNGA1 channel intermediate state in nanodisc with diC8-PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zpv:
CNGA1 channel closed state in nanodisc cGMP-free
Method: single particle / : Park T, Nimigean CM

PDB-9zpw:
CNGA1 channel intermediate state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zpx:
CNGA1 channel open state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zpy:
CNGA1 channel closed state in nanodisc with brain PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

PDB-9zpz:
CNGA1 channel intermediate state in nanodisc with brain PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zq0:
CNGA1 channel closed state in nanodisc with diC8-PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

PDB-9zq1:
CNGA1 channel intermediate state in nanodisc with diC8-PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-70288:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

PDB-9oal:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

EMDB-70396:
S. griseus TUA bound UmbA4 complexes
Method: helical / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

PDB-9oee:
S. griseus TUA bound UmbA4 complexes
Method: helical / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-48812:
Cryo-EM structure of rabbit TRPM3 in apo resting state at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48813:
Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 in resting state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48814:
Cryo-EM structure of rabbit TRPM3 in apo activated state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48815:
Cryo-EM structure of rabbit TRPM3 in apo activated state at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48816:
Cryo-EM structure of rabbit TRPM3 in complex with primidone in resting state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48817:
Cryo-EM structure of rabbit TRPM3 in complex with primidone in activated state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48819:
Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 in activated state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48877:
Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70209:
Cryo-EM structure of apo rabbit TRPM3 having 3 resting and 1 activated subunits at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70210:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70211:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70212:
Cryo-EM structure of apo rabbit TRPM3 having 1 resting and 3 activated subunits at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70213:
Cryo-EM structure of apo rabbit TRPM3 having 3 resting and 1 activated subunits at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70214:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70215:
Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70216:
Cryo-EM structure of apo rabbit TRPM3 having 1 resting and 3 activated subunits at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70218:
Cryo-EM structure of CIM0216-bound rabbit TRPM3 having 3 resting and 1 activated subunits at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more