[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 980 items for (author: oliver & b)

EMDB-54627:
Local refinement of a PSI monomer of A. marina NIES-2412
Method: single particle / : Consoli G, Leong HF

EMDB-54956:
Trimeric photosystem I of Acaryochloris marina NIES-2412
Method: single particle / : Leong HF, Consoli G

PDB-9s6p:
Local refinement of a PSI monomer of A. marina NIES-2412
Method: single particle / : Consoli G, Leong HF

PDB-9sk3:
Trimeric photosystem I of Acaryochloris marina NIES-2412
Method: single particle / : Leong HF, Consoli G

EMDB-68793:
Vpb4Aa2 pore complex in C1 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

EMDB-71647:
Vpb4Aa2 pore complex in C7 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

PDB-22zo:
Single full-length subunit of the Vpb4Aa2 pore complex
Method: single particle / : Wirawan R, Lupton CJ, Venugopal H, Berry C, Dunstone MA, Spicer BA

PDB-9phf:
Vpb4Aa2 pore complex in C7 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

EMDB-75834:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

EMDB-75835:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

PDB-11mg:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

PDB-11mh:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

EMDB-56477:
SARM1 TIR with BEXi adduct 6
Method: single particle / : Sader KS, Oliveria TM

PDB-9tzw:
SARM1 TIR with BEXi adduct 6
Method: single particle / : Sader KS, Oliveria TM

EMDB-53970:
pre-Initiation Complex on ARS1 DNA (monomer)
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

EMDB-53971:
Pre-Initiation Complex on ARS1 DNA (dimer)
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-53972:
Phospho-DH bound by Sld3-MBD on ARS1 DNA
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-53973:
Phospho-MCM double hexamer bound to Sld3-Sld7-Cdc45 on ARS1 DNA
Method: single particle / : Puehringer T, Couves EC, Costa A

EMDB-56897:
sCMGE assembled on ARS1 DNA with RPA and no Sld2
Method: single particle / : Puehringer T, Palm G, Costa A

EMDB-56898:
sCMGE assembled on ARS1 DNA with Sld2 and RPA
Method: single particle / : Palm G, Costa A

PDB-28vy:
sCMGE assembled on ARS1 DNA with Sld2 and RPA
Method: single particle / : Butryn A, Palm G, Costa A

PDB-9rhi:
pre-Initiation Complex on ARS1 DNA (monomer)
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

PDB-9rhj:
Pre-Initiation Complex on ARS1 DNA (dimer)
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

PDB-9rhl:
Phospho-DH bound by Sld3-MBD on ARS1 DNA
Method: single particle / : Puehringer T, Couves EC, Costa A

PDB-9rhm:
Phospho-MCM double hexamer bound to Sld3-Sld7-Cdc45 on ARS1 DNA
Method: single particle / : Puehringer T, Butryn A, Couves EC, Costa A

EMDB-62139:
Structural and functional basis of antinociceptive action of conotoxin AoIA at the noradrenaline transporter
Method: single particle / : Zhang H, Harald S, Oliver B, Xu EH

PDB-9k6x:
Structural and functional basis of antinociceptive action of conotoxin AoIA at the noradrenaline transporter
Method: single particle / : Zhang H, Harald S, Oliver B, Xu EH

EMDB-55517:
Structure of human HER2 in complex with EPS232 Fab
Method: single particle / : Birtley J, Johnson RM, Regan L, Soni K, Pye VE, Fitzgerald K

EMDB-55518:
Structure of human HER2 in complex with EPS226 Fab
Method: single particle / : Birtley J, Regan L, Johnson RM, Soni K, Pye VE, Fitzgerald K

PDB-9t3r:
Structure of human HER2 in complex with EPS232 Fab
Method: single particle / : Birtley J, Johnson RM, Regan L, Soni K, Pye VE, Fitzgerald K

PDB-9t3s:
Structure of human HER2 in complex with EPS226 Fab
Method: single particle / : Birtley J, Regan L, Johnson RM, Soni K, Pye VE, Fitzgerald K

EMDB-56237:
Cryo-EM structure of the extracellular domain of DC-SIGN
Method: single particle / : Balke A, Scheerer P

EMDB-74052:
Human Stomatin - intramembrane region
Method: single particle / : Vallese F, Clarke OB

PDB-9zd5:
Human Stomatin - intramembrane region
Method: single particle / : Vallese F, Clarke OB

EMDB-64627:
In situ cryo-electron tomogram of 4days rpn9 surface mutant nucleus
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64628:
In situ cryo-electron tomogram of 18h nucleus
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64629:
In situ cryo-electron tomogram of 4days WT cytoplasm 3
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64630:
In situ cryo-electron tomogram of 4days glucose 1h WT nucleus
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64631:
In situ cryo-electron tomogram of 4days glucose control WT nucleus
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64632:
In situ cryo-electron tomogram of SA 1day WT cytoplasm 1
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64633:
In situ cryo-electron tomogram of SA 1day WT cytoplasm 2
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64634:
In situ cryo-electron tomogram of 4days mlp1delta mlp2delta nucleus
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64635:
In vitro cryo-electron tomogram of 4days WT purified
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-64636:
In situ cryo-electron tomogram of 4days rpn9deltaN nucleus
Method: electron tomography / : Qu L, Tang XM, Baumeister W

EMDB-73881:
Human Stomatin - C8 Symmetry
Method: single particle / : Vallese F, Clarke OB

EMDB-74046:
C4 local refinement of stomatin-bound aquaporin (human)
Method: single particle / : Vallese F, Clarke OB

EMDB-74047:
C3 local refinement of Urea Transporter B (SLC14A1) bound to human stomatin oligomer
Method: single particle / : Vallese F, Clarke OB

EMDB-74049:
C1 local refinement of aquaporin 1 bound to endogenous human stomatin
Method: single particle / : Vallese F, Clarke OB

PDB-9z7u:
Human Stomatin - C8 Symmetry
Method: single particle / : Vallese F, Clarke OB

PDB-9zcz:
C4 local refinement of stomatin-bound aquaporin (human)
Method: single particle / : Vallese F, Clarke OB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more