[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 218 items for (author: liu & zy)

EMDB-65070:
cryoEM structure of retron-Eco7 complex (form II)
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-65064:
cryoEM structure of retron-Eco7 complex
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-65052:
cryoEM structure of ptuA-ptuB complex in Retron-Eco7 anti-phage system
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-54837:
Chlamydomonas nuclear envelope-bound ribosome
Method: subtomogram averaging / : Waltz F, Lamm L, Righetto RD, Engel BD

EMDB-62441:
CryoEM structure of osPHT1-11 at pH 8.0
Method: single particle / : Du ZM, Guan ZY, Liu Z

EMDB-62480:
CryoEM structure of osPHT1-11 at pH 5.0
Method: single particle / : Du ZM, Guan ZY, Liu Z

EMDB-63214:
cryo-EM structure of retron Eco2
Method: single particle / : Wang YJ, Wang C, Guan ZY, Zou TT

EMDB-60692:
SARS-CoV-2 Replication-Transcription Complex has a dimer architecture (dRTC) in post-capping state
Method: single particle / : Yan LM, Rao ZH, Lou ZY

EMDB-60693:
SARS-CoV-2 Replication-Transcription Complex has a dimer architecture (local dRTC) in post-capping state
Method: single particle / : Yan LM, Rao ZH, Lou ZY

EMDB-61589:
Structure of HHV6B glycoprotein B
Method: single particle / : Fang XY, Xie C, Sun C, Zeng MS, Liu Z

EMDB-60663:
SARS-CoV-2 E-RTC bound to pRNA-nsp9 and GDP-BeF3-
Method: single particle / : Yan LM, Huang YC, Liu YX, Rao ZH, Lou ZY

EMDB-64175:
SARS-CoV-2 E-RTC in complex with RNA-nsp9 and GMPPNP
Method: single particle / : Huang YC, Liu YX, Lou ZY, Rao ZH, Yan LM

EMDB-46604:
BG505 DS-SOSIP.664 apo structure from the CH103 KN cryo-EM dataset
Method: single particle / : Parsons RJ, Acharya P

EMDB-46605:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 KN Fab bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46606:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 KN Fabs bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46613:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 Fab bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46614:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 Fabs bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7g:
BG505 DS-SOSIP.664 apo structure from the CH103 KN cryo-EM dataset
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7h:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 KN Fab bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7i:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 KN Fabs bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7o:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 Fab bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7p:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 Fabs bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-60816:
Cryo-EM structure of PhyB(Y276H,1-908)-PIF6beta complex
Method: single particle / : Jia HL, Guan ZY, Ding JY, Wang XY, Ma L, Yin P

EMDB-60860:
Cryo-EM structure of full-length phyB(Y276H)-PIF6beta complex
Method: single particle / : Jia HL, Guan ZY, Ding JY, Wang XY, Ma L, Yin P

EMDB-61582:
Cryo-EM structure of phyB-PIF6beta complex
Method: single particle / : Jia HL, Guan ZY, Ding JY, Wang XY, Ma L, Yin P

EMDB-61158:
Cryo-EM structure of the rice isoamylase ISA1 dimer
Method: single particle / : Guan ZY, Yan JJ

EMDB-61188:
Cryo-EM structure of the rice isoamylase ISA1-ISA2 heterocomplex
Method: single particle / : Guan ZY, Yan JJ

EMDB-63051:
Cryo-EM structure of the rice isoamylase ISA1-ISA2 heterocomplex incubated with Amylopectin
Method: single particle / : Guan ZY, Yan JJ

EMDB-62692:
SARS-CoV-2 C-RTC with 13-TP
Method: single particle / : Huang YC, Liang L, Liu YX, Yan LM, Lou ZY, Rao ZH

EMDB-48423:
Angavokely virus (AngV) fusion (F) protein ectodomain in pre-fusion conformation
Method: single particle / : Lella M, Acharya P

EMDB-48535:
AngV-F Pre-fusion Protein
Method: single particle / : Lella M, Acharya P

PDB-9mnh:
Angavokely virus (AngV) fusion (F) protein ectodomain in pre-fusion conformation
Method: single particle / : Lella M, Acharya P

PDB-9mqn:
AngV-F Pre-fusion Protein
Method: single particle / : Lella M, Acharya P

EMDB-60273:
Cryo-EM structure of a short prokaryotic Argonaute system from archaeon Suldolobus islandicus
Method: single particle / : Dai ZK, Guan ZY, Han WY, Zou TT

EMDB-63074:
Cryo-EM structure of SiAgo-Aga1 complex
Method: single particle / : Dai ZK, Guan ZY, Zou TT

EMDB-61210:
H176A mutant of human G6PC1 in complex with G6P
Method: single particle / : Jiang DH, Xia ZY

EMDB-61211:
Human G6PC1 in apo state
Method: single particle / : Jiang DH, Xia ZY

EMDB-61139:
CryoEM structure of human XPR1 in complex with phosphate in state A
Method: single particle / : Zhang WH, Chen YK, Guan ZY, Liu Z

EMDB-61140:
CryoEM structure of human XPR1 in complex with phosphate in state B
Method: single particle / : Zhang WH, Chen YK, Guan ZY, Liu Z

EMDB-61141:
CryoEM structure of human XPR1 in complex with phosphate in state C
Method: single particle / : Zhang WH, Chen YK, Guan ZY, Liu Z

EMDB-61595:
retron Ec86-effector fiber
Method: single particle / : Wang YJ, Guan ZY, Wang C, Zou TT

EMDB-61138:
CryoEM structure of human XPR1 in apo state
Method: single particle / : Zhang WH, Chen YK, Guan ZY, Liu Z

EMDB-42041:
CryoEM structure of neutralizing antibody HC84.26 in complex with Hepatitis C virus envelope glycoprotein E2_New interface
Method: single particle / : Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA

EMDB-41774:
CryoEM structure of non-neutralizing bivalent antibody CBH-4B in complex with Hepatitis C virus envelope glycoprotein E2
Method: single particle / : Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA

EMDB-41703:
CryoEM structure of non-neutralizing antibody CBH-4B in complex with Hepatitis C virus envelope glycoprotein E2
Method: single particle / : Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA

EMDB-42948:
Microtubule protofilament reconstruction in CCP5:microtubule class#1 complex
Method: single particle / : Chen J, Zehr EA, Gruschus JM, Szyk A, Liu Y, Tanner ME, Tjandra N, Roll-Mecak A

EMDB-44544:
Microtubule protofilament reconstruction in CCP5:microtubule class#2 complex
Method: single particle / : Chen J, Zehr EA, Gruschus JM, Szyk A, Liu Y, Tanner ME, Tjandra N, Roll-Mecak A

EMDB-44545:
Microtubule Protofilament reconstruction in CCP5:microtubule class#3 complex
Method: single particle / : Chen J, Zehr EA, Gruschus JM, Szyk A, Liu Y, Tanner ME, Tjandra N, Roll-Mecak A

EMDB-41245:
CryoEM structure of Fab HC84.26-HCV E2 complex
Method: single particle / : Shahid S, Liqun J, LIu Y, Hasan SS, Mariuzza RA

EMDB-41247:
CryoEM structure of neutralizing antibody HC84.26 in complex with Hepatitis C virus envelope glycoprotein E2
Method: single particle / : Shahid S, Liqun J, Liu Y, Hasan SS, Mariuzza RA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more