[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 117 items for (author: hartman & j)

EMDB-53353:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

PDB-9qtj:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

EMDB-51788:
Cryo EM structure of RC-dLH complex model II from Gemmatimonas groenlandica
Method: single particle / : Gardiner AT, Jing Y, Bina D, Mujakic I, Gardian Z, Kaftan D, Joosten M, Jakobi A, Castro-Hartmann P, Qian P, Koblizek M

PDB-9h22:
Cryo EM structure of RC-dLH complex model II from Gemmatimonas groenlandica
Method: single particle / : Gardiner AT, Jing Y, Bina D, Mujakic I, Gardian Z, Kaftan D, Joosten M, Jakobi A, Castro-Hartmann P, Qian P, Koblizek M

EMDB-51760:
Cryo-EM structure of RC-dLH complex model I from Gem. groenlandica strain TET16
Method: single particle / : Gardiner A, Qian P, Koblizek M, Jing Y, Joosten M, Jakobi A, Bina D, Mujakic I, Gardian Z, Kaftan D, Castro-Hartmann P

PDB-9h19:
Cryo-EM structure of RC-dLH complex model I from Gem. groenlandica strain TET16
Method: single particle / : Gardiner A, Qian P, Koblizek M, Jing Y, Joosten M, Jakobi A, Bina D, Mujakic I, Gardian Z, Kaftan D, Castro-Hartmann P

EMDB-16862:
Molecular Mechanism of trypanosomal AQP2
Method: single particle / : Weyand SN, Matusevicius M, Yamashita K

EMDB-16863:
Molecular Mechanism of trypanosomal AQP2
Method: single particle / : Weyand SN, Matusevicius M, Yamashita K

EMDB-16864:
Molecular Mechanism of trypanosomal AQP2
Method: single particle / : Weyand SN, Matusevicius M, Yamashita K

EMDB-17104:
AApoAII amyloid fibril Morphology II (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

EMDB-17105:
AApoAII amyloid fibril Morphology I (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

PDB-8oq4:
AApoAII amyloid fibril Morphology II (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

PDB-8oq5:
AApoAII amyloid fibril Morphology I (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

EMDB-26786:
CPV Affinity Purified Polyclonal Fab A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26787:
CPV Affinity Purified Polyclonal Fab B Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26788:
CPV Total-Fab Polyclonal A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26789:
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26790:
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

PDB-7utp:
CPV Affinity Purified Polyclonal Fab A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

PDB-7utr:
CPV Affinity Purified Polyclonal Fab B Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

PDB-7uts:
CPV Total-Fab Polyclonal A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

PDB-7utu:
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

PDB-7utv:
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26610:
Cryo-EM structure of rabbit RyR1 in the presence of high Mg2+ and AMP-PCP in nanodisc
Method: single particle / : Nayak AR, Samso M

EMDB-15860:
Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

PDB-8b5l:
Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

EMDB-15863:
Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

PDB-8b6c:
Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

EMDB-32588:
The Cryo-EM structure of siphonaxanthin chlorophyll a/b type light-harvesting complex II
Method: single particle / : Seki S, Nakaniwa T, Castro-Hartmann P, Sader K, Kawamoto A, Tanaka H, Qian P, Kurisu G, Fujii R

PDB-7wlm:
The Cryo-EM structure of siphonaxanthin chlorophyll a/b type light-harvesting complex II
Method: single particle / : Seki S, Nakaniwa T, Castro-Hartmann P, Sader K, Kawamoto A, Tanaka H, Qian P, Kurisu G, Fujii R

EMDB-14633:
PucA-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ

PDB-7zcu:
PucA-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ

EMDB-14650:
PucB-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ, Nguyen-Phan TC

EMDB-14682:
PucD-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ, Nguyen-Phan TC

EMDB-14685:
PucE-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ, Nguyen-Phan TC

PDB-7zdi:
PucB-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ, Nguyen-Phan TC

PDB-7ze3:
PucD-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ, Nguyen-Phan TC

PDB-7ze8:
PucE-LH2 complex from Rps. palustris
Method: single particle / : Qian P, Cogdell RJ, Nguyen-Phan TC

EMDB-14709:
Cryo-EM structure of human NKCC1 (TM domain)
Method: single particle / : Nissen P, Fenton R, Neumann C, Lindtoft Rosenbaek L, Kock Flygaard R, Habeck M, Lykkegaard Karlsen J, Wang Y, Lindorff-Larsen K, Gad H, Hartmann R, Lyons J

PDB-7zgo:
Cryo-EM structure of human NKCC1 (TM domain)
Method: single particle / : Nissen P, Fenton R, Neumann C, Lindtoft Rosenbaek L, Kock Flygaard R, Habeck M, Lykkegaard Karlsen J, Wang Y, Lindorff-Larsen K, Gad H, Hartmann R, Lyons J

EMDB-13416:
Human voltage-gated potassium channel Kv3.1 (apo condition)
Method: single particle / : Chi G, Venkaya S

EMDB-13417:
Human voltage-gated potassium channel Kv3.1 (with Zn)
Method: single particle / : Chi G, Qian P

EMDB-13418:
Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn)
Method: single particle / : Chi G, Qian P

EMDB-13419:
Human voltage-gated potassium channel Kv3.1 (with EDTA)
Method: single particle / : Chi G, Qian P

PDB-7phh:
Human voltage-gated potassium channel Kv3.1 (apo condition)
Method: single particle / : Chi G, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Marsden B, MacLean EM, Fernandez-Cid A, Pike ACW, Savva C, Ragan TJ, Burgess-Brown NA, Duerr KL

PDB-7phi:
Human voltage-gated potassium channel Kv3.1 (with Zn)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Fernandez-Cid A, Marsden B, MacLean EM, Pike ACW, Sader K, Burgess-Brown NA, Duerr KL

PDB-7phk:
Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Marsden B, MacLean EM, Fernandez-Cid A, Pike ACW, Sader K, Burgess-Brown NA, Duerr KL

PDB-7phl:
Human voltage-gated potassium channel Kv3.1 (with EDTA)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Fernandez-Cid A, Pike ACW, Marsden B, MacLean EM, Sader K, Burgess-Brown NA, Duerr KL

EMDB-12679:
Cryo-EM structure (model_1a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.4 A
Method: single particle / : Qian P, Koblizek M

EMDB-12680:
Cryo-EM structure (model_2a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.5 A
Method: single particle / : Qian P, Koblizek M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more