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Showing 1 - 50 of 204 items for (author: ehara & h)

EMDB-68371:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, Spt6 reconstruction)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-68372:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, Spt6-Set2(AID) reconstruction)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-68373:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, Nucleosome-Set2(CD) reconstruction)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66103:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66104:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66105:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66106:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-66107:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, FACT-hexamer)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wms:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmt:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmu:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type A)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmv:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type B)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

PDB-9wmw:
Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, FACT-hexamer)
Method: single particle / : Kujirai T, Ehara H, Ito T, Henmi M, Sekine S, Kurumizaka H

EMDB-62656:
Cryo-EM structure of PSI-ACPI from Rhodomonas sp. NIES-2332 at 2.08 angstroms resolution
Method: single particle / : Zhang WY, Akita F, Shen JR

EMDB-62717:
Cryo-EM structure of PSI-11ACPIs from Rhodomonas sp. NIES-2332 at 2.14 angstrom resolution
Method: single particle / : Zhang WY, Akita F, Shen JR

EMDB-62846:
cryo-EM structure of PSII-ACPII from Rhodomonas sp. NIES-2332
Method: single particle / : Yonehara N, Akita F, Shen JR

PDB-9kz9:
Cryo-EM structure of PSI-ACPI from Rhodomonas sp. NIES-2332 at 2.08 angstroms resolution
Method: single particle / : Zhang WY, Akita F, Shen JR

PDB-9l0k:
Cryo-EM structure of PSI-11ACPIs from Rhodomonas sp. NIES-2332 at 2.14 angstrom resolution
Method: single particle / : Zhang WY, Akita F, Shen JR

PDB-9l5v:
cryo-EM structure of PSII-ACPII from Rhodomonas sp. NIES-2332
Method: single particle / : Yonehara N, Akita F, Shen JR

EMDB-65631:
Subtomogram average of MJ1HA S-layer
Method: subtomogram averaging / : Goto-Ito S, Yamagata A, Lee Y, Ehara H, Ito T

EMDB-65632:
Subtomogram average of MJ1 attachment organelle
Method: subtomogram averaging / : Goto-Ito S, Yamagata A, Lee Y, Ehara H, Ito T

EMDB-60837:
Cryo-EM structure of KpFtsZ-ZapA complex
Method: helical / : Fujita J, Hibino K, Kagoshima G, Kamimura N, Kato Y, Uehara R, Namba K, Uchihashi T, Matsumura H

PDB-9isk:
Cryo-EM structure of KpFtsZ-ZapA complex
Method: helical / : Fujita J, Hibino K, Kagoshima G, Kamimura N, Kato Y, Uehara R, Namba K, Uchihashi T, Matsumura H

EMDB-60592:
RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome containing histone variant H2A.B
Method: single particle / : Akatsu M, Kujirai T, Hirano R, Ehara H, Takizawa Y, Sekine S, Kurumizaka H

EMDB-60593:
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome containing histone variant H2A.B
Method: single particle / : Akatsu M, Kujirai T, Rina H, Ehara H, Takizawa Y, Sekine S, Kurumizaka H

PDB-9ii7:
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome containing histone variant H2A.B
Method: single particle / : Akatsu M, Kujirai T, Rina H, Ehara H, Takizawa Y, Sekine S, Kurumizaka H

EMDB-60764:
Local refinement structure of sEGFR and 528 Fv (from HL-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60765:
HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60766:
HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60767:
HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60768:
Local refinement structure of sEGFR and 528 Fv (from LH-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60769:
LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60770:
LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-60771:
LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ip7:
Local refinement structure of sEGFR and 528 Fv (from HL-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ip8:
Poly-alanine model for HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ip9:
Poly-alanine model for HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipa:
Poly-alanine model for HL-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipb:
Local refinement structure of sEGFR and 528 Fv (from LH-type bispecific diabody Ex3) complex
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipc:
Poly-alanine model for LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (closed conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipd:
Poly-alanine model for LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (middle conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

PDB-9ipe:
Poly-alanine model for LH-type bispecific diabody Ex3 composed of 528 and OKT3 Fvs in ternary complex with sEGFR and CD3gamma-epsilon (open conformation)
Method: single particle / : Sato K, Uehara S, Tsugita A, Matsui T, Asano R, Makabe K, Yokoyama T, Tanaka Y

EMDB-38604:
RNA polymerase II elongation complex with upstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-38607:
RNA polymerase II elongation complex with DSIF, SPT6, and ELOF1 transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-38624:
RNA polymerase II elongation complex transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-38717:
RNA polymerase II elongation complex with downstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xrj:
RNA polymerase II elongation complex with upstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xrm:
RNA polymerase II elongation complex with DSIF, SPT6, and ELOF1 transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xso:
RNA polymerase II elongation complex transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xvs:
RNA polymerase II elongation complex with downstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

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