PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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8R55	Bacillus subtilis MutS2-collided disome complex (collided 70S) 分子名称: 16S rRNA (1533-MER), 23S RNA (2887-MER), 30S ribosomal protein S10, ... 著者 Park, E, Mackens-Kiani, T, Berhane, R, Esser, H, Erdenebat, C, Burroughs, A.M, Berninghausen, O, Aravind, L, Beckmann, R, Green, R, Buskirk, A.R. 登録日 2023-11-16 公開日 2024-01-17 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (3.57 Å) 主引用文献 B. subtilis MutS2 splits stalled ribosomes into subunits without mRNA cleavage. Embo J., 43, 2024
8A6W	Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with cholestenone 分子名称: (8ALPHA,9BETA)-CHOLEST-4-EN-3-ONE, PROTOPORPHYRIN IX CONTAINING FE, Steroid C26-monooxygenase 著者 Snee, M, Amadi, C, Levy, C. 登録日 2022-06-20 公開日 2023-07-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with cholestenone To Be Published
6AO3	Crystal structure of the murine gasdermin D C-terminal domain 分子名称: Gasdermin-D 著者 Liu, Z, Wang, C, Yang, J, Xiao, T.S. 登録日 2017-08-15 公開日 2018-04-11 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structures of the Gasdermin D C-Terminal Domains Reveal Mechanisms of Autoinhibition. Structure, 26, 2018
1BU1	SRC FAMILY KINASE HCK SH3 DOMAIN 分子名称: PROTEIN (HEMOPOIETIC CELL KINASE) 著者 Arold, S, Franken, P, Dumas, C. 登録日 1998-09-09 公開日 1998-11-11 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 RT loop flexibility enhances the specificity of Src family SH3 domains for HIV-1 Nef. Biochemistry, 37, 1998
6V65	Crystal structure of KRAS(GMPPNP)-NF1(GRD)-SPRED1 complex 分子名称: FORMIC ACID, GTPase KRas, MAGNESIUM ION, ... 著者 Yan, W, Simanshu, D.K. 登録日 2019-12-04 公開日 2020-07-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.763 Å) 主引用文献 Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR. Cell Rep, 32, 2020
5J7K	Loop grafting onto a highly stable FN3 scaffold 分子名称: FN3con-a-lys, ZINC ION 著者 Porebski, B.T, Drinkwater, N, McGowan, S, Buckle, A.M. 登録日 2016-04-06 公開日 2016-08-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Circumventing the stability-function trade-off in an engineered FN3 domain. Protein Eng.Des.Sel., 2016
1BUQ	SOLUTION STRUCTURE OF DELTA-5-3-KETOSTEROID ISOMERASE COMPLEXED WITH THE STEROID 19-NORTESTOSTERONE-HEMISUCCINATE 分子名称: PROTEIN (3-KETOSTEROID ISOMERASE-19-NORTESTOSTERONE-HEMISUCCINATE), SUCCINIC ACID MONO-(13-METHYL-3-OXO-2,3,6,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYCLOPENTA[A]PHENANTHREN-17-YL) ESTER 著者 Massiah, M.A, Abeygunawardana, C, Gittis, A.G, Mildvan, A.S. 登録日 1998-09-04 公開日 1999-01-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of Delta 5-3-ketosteroid isomerase complexed with the steroid 19-nortestosterone hemisuccinate. Biochemistry, 37, 1998
6JBZ	Structural analysis of molybdopterin synthases from two mycobacteria pathogens 分子名称: MoaD/ThiS family protein, Molybdenum cofactor biosynthesis protein E, SULFATE ION 著者 Wang, H.Y, Liu, X. 登録日 2019-01-27 公開日 2019-02-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.603 Å) 主引用文献 Structural analysis of molybdopterin synthases from two mycobacterial pathogens. Biochem. Biophys. Res. Commun., 511, 2019
8G94	Structure of CD69-bound S1PR1 coupled to heterotrimeric Gi 分子名称: Early activation antigen CD69, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Chen, H, Li, X. 登録日 2023-02-21 公開日 2023-04-19 最終更新日 2023-04-26 実験手法 ELECTRON MICROSCOPY (3.15 Å) 主引用文献 Transmembrane protein CD69 acts as an S1PR1 agonist. Elife, 12, 2023
6AQ7	Structure of POM6 FAB fragment complexed with mouse PrPc 分子名称: 3,3',3''-phosphanetriyltripropanoic acid, GLYCEROL, Major prion protein, ... 著者 Baral, P.K, Swayampakula, M, James, M.N.G. 登録日 2017-08-18 公開日 2018-04-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structural characterization of POM6 Fab and mouse prion protein complex identifies key regions for prions conformational conversion. FEBS J., 285, 2018
8A9P	Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with a fragment 分子名称: (3-phenyl-1,2,4-oxadiazol-5-yl)methanamine, BROMIDE ION, CHLORIDE ION, ... 著者 Snee, M, Katariya, M, Levy, C, Leys, D. 登録日 2022-06-29 公開日 2023-07-12 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with a fragment To Be Published
7KHP	Acyl-enzyme intermediate structure of SARS-CoV-2 Mpro in complex with its C-terminal autoprocessing sequence. 分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE 著者 Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J. 登録日 2020-10-21 公開日 2020-10-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site. Nat Commun, 11, 2020
7ANU	Crystal structure of Pyrococcus abyssi Pbp11 分子名称: GLYCEROL, IMIDAZOLE, NICKEL (II) ION, ... 著者 Hogrel, G, Girard, E, Franzetti, B. 登録日 2020-10-12 公開日 2021-11-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Characterization of a small tRNA-binding protein that interacts with the archaeal proteasome complex. Mol.Microbiol., 118, 2022
7KJ7	Plasmodium falciparum protein Pf12p 分子名称: Surface protein P12p 著者 Dietrich, M.H, Tham, W.H. 登録日 2020-10-26 公開日 2021-02-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Nanobody generation and structural characterization of Plasmodium falciparum 6-cysteine protein Pf12p. Biochem.J., 478, 2021
2IWG	COMPLEX BETWEEN THE PRYSPRY DOMAIN OF TRIM21 AND IGG FC 分子名称: 52 KDA RO PROTEIN, IG GAMMA-1 CHAIN C, alpha-L-fucopyranose, ... 著者 James, L.C, Keeble, A.H, Rhodes, D.A, Trowsdale, J. 登録日 2006-06-30 公開日 2007-03-27 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural Basis for Pryspry-Mediated Tripartite Motif (Trim) Protein Function. Proc.Natl.Acad.Sci.USA, 104, 2007
7KOE	Electron bifurcating flavoprotein Fix/EtfABCX 分子名称: Electron transfer flavoprotein, alpha subunit, beta subunit, ... 著者 Feng, X, Li, H. 登録日 2020-11-08 公開日 2021-01-20 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryoelectron microscopy structure and mechanism of the membrane-associated electron-bifurcating flavoprotein Fix/EtfABCX. Proc.Natl.Acad.Sci.USA, 118, 2021
7B1X	Crystal structure of cold-active esterase PMGL3 from permafrost metagenomic library 分子名称: esterase PMGL3 著者 Boyko, K.M, Nikolaeva, A.Y, Petrovskaya, L.E, Kryukova, M.V, Kryukova, E.A, Korzhenevsky, D.A, Lomakina, G.Y, Novototskaya-Vlasova, K.A, Rivkina, E.M, Dolgikh, D.A, Kirpichnikov, M.P, Popov, V.O. 登録日 2020-11-25 公開日 2021-11-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and Biochemical Characterization of a Cold-Active PMGL3 Esterase with Unusual Oligomeric Structure. Biomolecules, 11, 2021
5JK7	The X-ray structure of the DDB1-DCAF1-Vpr-UNG2 complex 分子名称: DNA damage-binding protein 1, Protein VPRBP, Protein Vpr, ... 著者 Calero, G, Ahn, J, Wu, Y. 登録日 2016-04-26 公開日 2016-10-05 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 The DDB1-DCAF1-Vpr-UNG2 crystal structure reveals how HIV-1 Vpr steers human UNG2 toward destruction. Nat.Struct.Mol.Biol., 23, 2016
5JMC	Receptor binding domain of Botulinum neurotoxin A in complex with rat SV2C 分子名称: Botulinum neurotoxin type A, Synaptic vesicle glycoprotein 2C 著者 Yao, G, Zhang, S, Mahrhold, S, Lam, K, Stern, D, Bagramyan, K, Perry, K, Kalkum, M, Rummel, A, Dong, M, Jin, R. 登録日 2016-04-28 公開日 2016-06-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 N-linked glycosylation of SV2 is required for binding and uptake of botulinum neurotoxin A. Nat.Struct.Mol.Biol., 23, 2016
7AIK	Ribonucleotide Reductase R2 protein from Aquifex aeolicus 分子名称: FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta,Ribonucleoside-diphosphate reductase subunit beta 著者 Rehling, D, Scaletti, E.R, Stenmark, P. 登録日 2020-09-27 公開日 2021-11-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural and Biochemical Investigation of Class I Ribonucleotide Reductase from the Hyperthermophile Aquifex aeolicus. Biochemistry, 61, 2022
5MCU	New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins (complex p53DBD-LHG2) 分子名称: 1,2-ETHANEDIOL, Cellular tumor antigen p53, DNA, ... 著者 Golovenko, D, Rozenberg, H, Shakked, Z. 登録日 2016-11-10 公開日 2018-06-13 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins. Structure, 26, 2018
6SP2	CryoEM structure of SERINC from Drosophila melanogaster 分子名称: CARDIOLIPIN, Lauryl Maltose Neopentyl Glycol, Membrane protein TMS1d, ... 著者 Pye, V.E, Nans, A, Cherepanov, P. 登録日 2019-08-30 公開日 2020-01-01 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (3.33 Å) 主引用文献 A bipartite structural organization defines the SERINC family of HIV-1 restriction factors. Nat.Struct.Mol.Biol., 27, 2020
6BBA	Crystal structure of human mitochondrial ClpP complex with acyldepsipeptide ADEP-28 分子名称: ATP-dependent Clp protease proteolytic subunit, mitochondrial, Acyldepsipeptide ADEP-28 著者 Mabanglo, M.F, Houry, W.A. 登録日 2017-10-17 公開日 2018-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.796 Å) 主引用文献 Acyldepsipeptide Analogs Dysregulate Human Mitochondrial ClpP Protease Activity and Cause Apoptotic Cell Death. Cell Chem Biol, 25, 2018
7ZZI	Plasmodium falciparum hexokinase complexed with glucose and citrate 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Phosphotransferase, ... 著者 Fritz-Wolf, K, Dillenberger, M, Rahlfs, S, Becker, K. 登録日 2022-05-25 公開日 2023-08-30 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Analysis of Plasmodium falciparum Hexokinase Provides Novel Information about Catalysis Due to a Plasmodium -Specific Insertion. Int J Mol Sci, 24, 2023
8RZC	SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 11 分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-imidazol-1-yl-benzoic acid, ... 著者 Kalnins, G. 登録日 2024-02-12 公開日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 11 To Be Published

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