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PDB: 55 results

6BZ9
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BU of 6bz9 by Molmil
Crystal structure of human caspase-1 in complex with Ac-FLTD-CMK
Descriptor: Ac-FLTD-CMK, Caspase-1, DI(HYDROXYETHYL)ETHER
Authors:Xiao, T.S, Yang, J, Liu, Z, Wang, C, Yang, R.
Deposit date:2017-12-22
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Mechanism of gasdermin D recognition by inflammatory caspases and their inhibition by a gasdermin D-derived peptide inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6XR8
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BU of 6xr8 by Molmil
Distinct conformational states of SARS-CoV-2 spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Rawson, S, Volloch, S.R, Chen, B.
Deposit date:2020-07-11
Release date:2020-07-22
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Distinct conformational states of SARS-CoV-2 spike protein.
Science, 369, 2020
6XRA
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BU of 6xra by Molmil
Distinct conformational states of SARS-CoV-2 spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Rawson, S, Rits-Volloch, S, Chen, B.
Deposit date:2020-07-11
Release date:2020-07-22
Last modified:2020-10-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Distinct conformational states of SARS-CoV-2 spike protein.
Science, 369, 2020
8T5Q
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BU of 8t5q by Molmil
SARS-CoV-2 ORF3a peptide in complex with TRAF2 TRAF domain
Descriptor: DI(HYDROXYETHYL)ETHER, ORF3a protein, TETRAETHYLENE GLYCOL, ...
Authors:Busscher, B.M, Xiao, T.S.
Deposit date:2023-06-14
Release date:2023-11-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:SARS-CoV-2 ORF3a-Mediated NF-kappa B Activation Is Not Dependent on TRAF-Binding Sequence.
Viruses, 15, 2023
8T5P
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BU of 8t5p by Molmil
SARS-CoV-2 ORF3a peptide in complex with TRAF3 TRAF domain
Descriptor: ORF3a protein, TNF receptor-associated factor 3
Authors:Busscher, B.M, Xiao, T.S.
Deposit date:2023-06-14
Release date:2023-11-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SARS-CoV-2 ORF3a-Mediated NF-kappa B Activation Is Not Dependent on TRAF-Binding Sequence.
Viruses, 15, 2023
4QLC
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BU of 4qlc by Molmil
Crystal structure of chromatosome at 3.5 angstrom resolution
Descriptor: CITRIC ACID, DNA (167-mer), H5, ...
Authors:Jiang, J.S, Zhou, B.R, Xiao, T.S, Bai, Y.W.
Deposit date:2014-06-11
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:Structural Mechanisms of Nucleosome Recognition by Linker Histones.
Mol.Cell, 33 Suppl 1, 2015
6UP4
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BU of 6up4 by Molmil
Crystal structure of the murine DHX36 helicase in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Dhx36 protein, MAGNESIUM ION
Authors:Liu, Z, Xiao, T.S.
Deposit date:2019-10-16
Release date:2020-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Function of Auxiliary Domains of the DEAH/RHA Helicase DHX36 in RNA Remodeling.
J.Mol.Biol., 432, 2020
6UP3
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BU of 6up3 by Molmil
Crystal structure of the murine DHX36 helicase in complex with ANP
Descriptor: Dhx36 protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Chuenchor, W, Jiang, J, Xiao, T.S.
Deposit date:2019-10-16
Release date:2020-10-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.691 Å)
Cite:Crystal structure of the murine DHX36 helicase in complex with ANP
To be published
6UP2
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BU of 6up2 by Molmil
Crystal structure of the murine DHX36 helicase
Descriptor: CHLORIDE ION, Dhx36 protein, GLYCEROL
Authors:Chuenchor, W, Jiang, J, Xiao, T.S.
Deposit date:2019-10-16
Release date:2020-10-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of the murine DHX36 helicase
To be published
6VIE
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BU of 6vie by Molmil
Structure of caspase-1 in complex with gasdermin D
Descriptor: Caspase-1 subunit p10, Caspase-1 subunit p20, Gasdermin-D
Authors:Liu, Z, Xiao, T.S.
Deposit date:2020-01-13
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Caspase-1 Engages Full-Length Gasdermin D through Two Distinct Interfaces That Mediate Caspase Recruitment and Substrate Cleavage.
Immunity, 53, 2020
6NRY
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BU of 6nry by Molmil
Crystal structure of human caspase-4
Descriptor: Caspase-4, GLYCEROL
Authors:Yang, J, Liu, Z, Shi, W, Xiao, T.S.
Deposit date:2019-01-24
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.184 Å)
Cite:Crystal structure of human caspase-4
To Be Published
6NS7
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BU of 6ns7 by Molmil
Crystal structure of murine caspase-11
Descriptor: Caspase-11, SULFATE ION
Authors:Yang, J, Liu, Z, Xiao, T.S.
Deposit date:2019-01-24
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of murine caspase-11
To Be Published
6PZP
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BU of 6pzp by Molmil
Crystal structure of caspase-1 in complex with VX-765
Descriptor: Caspase-1, N-(4-amino-3-chlorobenzene-1-carbonyl)-3-methyl-L-valyl-N-[(2S)-1-carboxy-3-oxopropan-2-yl]-L-prolinamide
Authors:Yang, J, Liu, Z, Xiao, T.S.
Deposit date:2019-08-01
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of caspase-1 in complex with VX-765
To Be Published
5WQ6
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BU of 5wq6 by Molmil
Crystal Structure of hMNDA-PYD with MBP tag
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, MBP tagged hMNDA-PYD, ...
Authors:Jin, T.C, Xiao, T.S.
Deposit date:2016-11-23
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Design of an expression system to enhance MBP-mediated crystallization
Sci Rep, 7, 2017
5WPZ
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BU of 5wpz by Molmil
Crystal structure of MNDA PYD with MBP tag
Descriptor: MBP-hMNDA-PYD, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Jin, T.C, Xiao, T.S.
Deposit date:2016-11-22
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design of an expression system to enhance MBP-mediated crystallization
Sci Rep, 7, 2017
5H7N
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BU of 5h7n by Molmil
Crystal structure of human NLRP12-PYD with a MBP tag
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NLRP12-PYD with MBP tag, ...
Authors:Jin, T.C, Xiao, T.S.
Deposit date:2016-11-19
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.849 Å)
Cite:Design of an expression system to enhance MBP-mediated crystallization
Sci Rep, 7, 2017
5H7Q
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BU of 5h7q by Molmil
Crystal structure of human MNDA PYD domain with MBP tag
Descriptor: ACETATE ION, MNDA PYD domain with MBP tag, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Jin, T.C, Xiao, T.S.
Deposit date:2016-11-20
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Design of an expression system to enhance MBP-mediated crystallization
Sci Rep, 7, 2017
8D56
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BU of 8d56 by Molmil
One RBD-up state of SARS-CoV-2 BA.2 variant spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Tang, W.C, Gao, H.L, Shi, W, Peng, H.Q, Volloch, S.R, Xiao, T.S, Chen, B.
Deposit date:2022-06-04
Release date:2023-06-07
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural and functional characteristics of the SARS-CoV-2 Omicron subvariant BA.2 spike protein.
Nat.Struct.Mol.Biol., 30, 2023
8D55
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BU of 8d55 by Molmil
Closed state of SARS-CoV-2 BA.2 variant spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Tang, W.C, Gao, H.L, Shi, W, Peng, H.Q, Volloch, S.R, Xiao, T.S, Chen, B.
Deposit date:2022-06-04
Release date:2023-06-07
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural and functional characteristics of the SARS-CoV-2 Omicron subvariant BA.2 spike protein.
Nat.Struct.Mol.Biol., 30, 2023
8D5A
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BU of 8d5a by Molmil
Middle state of SARS-CoV-2 BA.2 variant spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Tang, W.C, Gao, H.L, Shi, W, Peng, H.Q, Volloch, S.R, Xiao, T.S, Chen, B.
Deposit date:2022-06-04
Release date:2023-06-07
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural and functional characteristics of the SARS-CoV-2 Omicron subvariant BA.2 spike protein.
Nat.Struct.Mol.Biol., 30, 2023
7N1W
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BU of 7n1w by Molmil
Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B.
Deposit date:2021-05-28
Release date:2021-07-07
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
Science, 373, 2021
7N1Y
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BU of 7n1y by Molmil
Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B.
Deposit date:2021-05-28
Release date:2021-07-07
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
Science, 373, 2021
7N1U
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BU of 7n1u by Molmil
Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B.
Deposit date:2021-05-28
Release date:2021-07-07
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
Science, 373, 2021
7N1X
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BU of 7n1x by Molmil
Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B.
Deposit date:2021-05-28
Release date:2021-07-07
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
Science, 373, 2021
7N1T
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BU of 7n1t by Molmil
Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B.
Deposit date:2021-05-28
Release date:2021-07-07
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
Science, 373, 2021

 

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