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PDB: 281 results

4HUS
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BU of 4hus by Molmil
Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with virginiamycin M1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Stogios, P.J, Minasov, G, Evdokimova, E, Wawrzak, Z, Yim, V, Krishnamoorthy, M, Di Leo, R, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-11-03
Release date:2012-11-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Potential for Reduction of Streptogramin A Resistance Revealed by Structural Analysis of Acetyltransferase VatA.
Antimicrob.Agents Chemother., 58, 2014
6AOK
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BU of 6aok by Molmil
Crystal structure of Legionella pneumophila effector Ceg4 with N-terminal TEV protease cleavage sequence
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Ceg4, ...
Authors:Stogios, P.J, Cuff, M.E, Nocek, B, Evdokimova, E, Egorova, O, Yim, V, Di Leo, R, Savchenko, A.
Deposit date:2017-08-16
Release date:2018-01-10
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:TheLegionella pneumophilaeffector Ceg4 is a phosphotyrosine phosphatase that attenuates activation of eukaryotic MAPK pathways.
J. Biol. Chem., 293, 2018
6MMZ
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BU of 6mmz by Molmil
Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H29A mutant apoenzyme
Descriptor: Aminoglycoside N(3)-acetyltransferase, CHLORIDE ION, SULFATE ION
Authors:Stogios, P.J, Skarina, T, Xu, Z, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
6MSW
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BU of 6msw by Molmil
Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans, K184L mutant
Descriptor: Deoxyribose-phosphate aldolase, GLYCEROL
Authors:Stogios, P.J, Skarina, T, Kim, T, Yim, V, Yakunin, A, Savchenko, A.
Deposit date:2018-10-18
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1,3-butanediol.
J.Biol.Chem., 295, 2020
6MN0
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BU of 6mn0 by Molmil
Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H168A mutant in complex with acetyl-CoA
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETYL COENZYME *A, Aminoglycoside N(3)-acetyltransferase, ...
Authors:Stogios, P.J, Skarina, T, Zu, X, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
4FO1
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BU of 4fo1 by Molmil
Crystal structure of lincosamide antibiotic adenylyltransferase LnuA, apo
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lincosamide resistance protein
Authors:Stogios, P.J, Wawrzak, Z, Minasov, G, Evdokimova, E, Egorova, O, Kudritska, M, Yim, V, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-06-20
Release date:2012-07-04
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of lincosamide antibiotic adenylyltransferase LnuA, apo
TO BE PUBLISHED
6MGK
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BU of 6mgk by Molmil
Crystal structure of the catalytic domain from GH74 enzyme PoGH74 from Paenibacillus odorifer, in complex with XLX xyloglucan
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Skarina, T, Nocek, B, Arnal, G, Brumer, H, Savchenko, A.
Deposit date:2018-09-14
Release date:2019-01-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural enzymology reveals the molecular basis of substrate regiospecificity and processivity of an exemplar bacterial glycoside hydrolase family 74endo-xyloglucanase.
Biochem. J., 475, 2018
4EJ7
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BU of 4ej7 by Molmil
Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, ATP-bound
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Aminoglycoside 3'-phosphotransferase AphA1-IAB, CALCIUM ION, ...
Authors:Stogios, P.J, Minasov, G, Tan, K, Evdokimova, E, Egorova, O, Di Leo, R, Shakya, T, Wright, G.D, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-06
Release date:2012-04-18
Last modified:2013-09-04
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure-guided optimization of protein kinase inhibitors reverses aminoglycoside antibiotic resistance.
Biochem.J., 454, 2013
6UHX
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BU of 6uhx by Molmil
Crystal structure of YIR035C short chain dehydrogenases/reductase from Saccharomyces cerevisiae
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Uncharacterized oxidoreductase YIR035C
Authors:Stogios, P.J, Skarina, T, Chen, C, Kagan, O, Iakounine, A, Savchenko, A.
Deposit date:2019-09-29
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of YIR035C short chain dehydrogenases/reductase from Saccharomyces cerevisiae
To Be Published
4E8O
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BU of 4e8o by Molmil
Crystal structure of aminoglycoside antibiotic 6'-N-acetyltransferase AAC(6')-Ih from Acinetobacter baumannii
Descriptor: Aac(6')-Ih protein, CHLORIDE ION
Authors:Stogios, P.J, Minasov, G, Dong, A, Evdokimova, E, Yim, V, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-20
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.138 Å)
Cite:Structural and Biochemical Characterization of Acinetobacter spp. Aminoglycoside Acetyltransferases Highlights Functional and Evolutionary Variation among Antibiotic Resistance Enzymes.
ACS Infect Dis., 3, 2017
4I3F
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BU of 4i3f by Molmil
Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Stogios, P.J, Xu, X, Dong, A, Cui, H, Alcaide, M, Tornes, J, Gertler, C, Yakimov, M.M, Golyshin, P.N, Ferrer, M, Savchenko, A.
Deposit date:2012-11-26
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the alpha / beta hydrolase family.
Biochem.J., 454, 2013
4HUR
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BU of 4hur by Molmil
Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with acetyl coenzyme A
Descriptor: 1,2-ETHANEDIOL, ACETYL COENZYME *A, CHLORIDE ION, ...
Authors:Stogios, P.J, Minasov, G, Evdokimova, E, Wawrzak, Z, Yim, V, Krishnamoorthy, M, Di Leo, R, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-11-03
Release date:2012-11-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Potential for Reduction of Streptogramin A Resistance Revealed by Structural Analysis of Acetyltransferase VatA.
Antimicrob.Agents Chemother., 58, 2014
4EVY
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BU of 4evy by Molmil
Crystal structure of aminoglycoside antibiotic 6'-N-acetyltransferase AAC(6')-Ig from Acinetobacter haemolyticus in complex with tobramycin
Descriptor: Aminoglycoside N(6')-acetyltransferase type 1, CHLORIDE ION, POTASSIUM ION, ...
Authors:Stogios, P.J, Evdokimova, E, Minasov, G, Yim, V, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-26
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.768 Å)
Cite:Structural and Biochemical Characterization of Acinetobacter spp. Aminoglycoside Acetyltransferases Highlights Functional and Evolutionary Variation among Antibiotic Resistance Enzymes.
ACS Infect Dis., 3, 2017
4OEN
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BU of 4oen by Molmil
Crystal structure of the second substrate binding domain of a putative amino acid ABC transporter from Streptococcus pneumoniae Canada MDR_19A
Descriptor: ACETATE ION, CHLORIDE ION, SULFATE ION, ...
Authors:Stogios, P.J, Wawrzak, Z, Kudritska, M, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-01-13
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the second substrate binding domain of a putative amino acid ABC transporter from Streptococcus pneumoniae Canada MDR_19A
To be Published
6AOJ
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BU of 6aoj by Molmil
Crystal structure of Legionella pneumophila effector Ceg4 with N-terminal yeast Hog1p sequence
Descriptor: CHLORIDE ION, Ceg4, MAGNESIUM ION
Authors:Stogios, P.J, Nocek, B, Cuff, M.E, Evdokimova, E, Egorova, O, Yim, V, Di Leo, R, Savchenko, A.
Deposit date:2017-08-16
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:TheLegionella pneumophilaeffector Ceg4 is a phosphotyrosine phosphatase that attenuates activation of eukaryotic MAPK pathways.
J. Biol. Chem., 293, 2018
3M4T
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BU of 3m4t by Molmil
Crystal structure of the BTB domain from Kaiso/ZBTB33, form I
Descriptor: SULFATE ION, Transcriptional regulator Kaiso
Authors:Stogios, P.J, Chen, L, Prive, G.G.
Deposit date:2010-03-11
Release date:2011-04-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of the BTB domain from Kaiso/ZBTB33, form I
TO BE PUBLISHED
4XVH
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BU of 4xvh by Molmil
Crystal structure of a Corynascus thermopiles (Myceliophthora fergusii) carbohydrate esterase family 2 (CE2) enzyme plus carbohydrate binding domain (CBD)
Descriptor: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, Carbohydrate esterase family 2 (CE2), GLYCEROL
Authors:Stogios, P.J, Dong, A, Xu, X, Cui, H, Savchenko, A.
Deposit date:2015-01-27
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9449 Å)
Cite:Crystal structure of a Corynascus thermopiles carbohydrate esterase family 2 (CE2) enzyme plus carbohydrate binding domain (CBD)
To Be Published
8EFZ
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BU of 8efz by Molmil
Crystal structure of CcNikZ-II, apoprotein
Descriptor: CHLORIDE ION, Extracellular solute-binding protein family 5
Authors:Stogios, P.J, Evdokimova, E, Diep, P, Yakunin, A, Mahadevan, K, Savchenko, A.
Deposit date:2022-09-10
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of CcNikZ-II, apoprotein
To Be Published
7TBU
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BU of 7tbu by Molmil
Crystal structure of the 5-enolpyruvate-shikimate-3-phosphate synthase (EPSPS) domain of Aro1 from Candida albicans in complex with shikimate-3-phosphate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-enolpyruvylshikimate-3-phosphate synthase, SHIKIMATE-3-PHOSPHATE
Authors:Stogios, P.J, Evdokimova, E, Michalska, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-12-22
Release date:2022-03-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
7TBV
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BU of 7tbv by Molmil
Crystal structure of the shikimate kinase + 3-dehydroquinate dehydratase + 3-dehydroshikimate dehydrogenase domains of Aro1 from Candida albicans
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Stogios, P.J, Evdokimova, E, Michalska, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-12-22
Release date:2022-03-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
4XUV
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BU of 4xuv by Molmil
Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris
Descriptor: GLYCEROL, Glycoside hydrolase family 105 protein
Authors:Stogios, P.J, Xu, X, Cui, H, Yim, V, Savchenko, A.
Deposit date:2015-01-26
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.0496 Å)
Cite:Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris
To Be Published
6MGL
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BU of 6mgl by Molmil
Crystal structure of the catalytic domain from GH74 enzyme PoGH74 from Paenibacillus odorifer, D60A mutant in complex with XXLG and XGXXLG xyloglucan
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Skarina, T, Arnal, G, Watanabe, N, Brumer, H, Savchenko, A.
Deposit date:2018-09-14
Release date:2019-01-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural enzymology reveals the molecular basis of substrate regiospecificity and processivity of an exemplar bacterial glycoside hydrolase family 74endo-xyloglucanase.
Biochem. J., 475, 2018
6MN2
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BU of 6mn2 by Molmil
Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, mutant H168A in abortive complex with sisomicin-CoA
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aminoglycoside N(3)-acetyltransferase, CHLORIDE ION, ...
Authors:Stogios, P.J, Skarina, T, Michalska, K, Xu, Z, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.744 Å)
Cite:Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, mutant H168A in abortive complex with sisomicin-CoA
To Be Published
3M52
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BU of 3m52 by Molmil
Crystal structure of the BTB domain from the Miz-1/ZBTB17 transcription regulator
Descriptor: ACETATE ION, ZINC ION, Zinc finger and BTB domain-containing protein 17
Authors:Stogios, P.J, Cuesta-Seijo, J.A, Chen, L, Prive, G.G.
Deposit date:2010-03-12
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Insights into Strand Exchange in BTB Domain Dimers from the Crystal Structures of FAZF and Miz1.
J.Mol.Biol., 400, 2010
6BNC
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BU of 6bnc by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, Thr315Ala mutant di-zinc and PEG complex
Descriptor: CHLORIDE ION, POLYETHYLENE GLYCOL (N=34), Phosphoethanolamine transferase, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-16
Release date:2018-01-31
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Substrate Recognition by a Colistin Resistance Enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 13, 2018

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PDB entries from 2024-09-04

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