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PDB: 2408 results

9ABP
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BU of 9abp by Molmil
A PRO TO GLY MUTATION IN THE HINGE OF THE ARABINOSE-BINDING PROTEIN ENHANCES BINDING AND ALTERS SPECIFICITY: SUGAR-BINDING AND CRYSTALLOGRAPHIC STUDIES
Descriptor: L-ARABINOSE-BINDING PROTEIN, alpha-D-galactopyranose, beta-D-galactopyranose
Authors:Vermersch, P.S, Tesmer, J.J.G, Quiocho, F.A.
Deposit date:1991-11-15
Release date:1992-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A Pro to Gly mutation in the hinge of the arabinose-binding protein enhances binding and alters specificity. Sugar-binding and crystallographic studies.
J.Biol.Chem., 265, 1990
8VRE
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BU of 8vre by Molmil
Structure of PYCR1 complexed with NADH and N-formyl-L-proline
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 1-formyl-L-proline, Pyrroline-5-carboxylate reductase 1, ...
Authors:Tanner, J.J, Meeks, K.R.
Deposit date:2024-01-21
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Screening a knowledge-based library of low molecular weight compounds against the proline biosynthetic enzyme 1-pyrroline-5-carboxylate 1 (PYCR1)
Protein Sci., 33, 2024
8VUI
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Structure of FabS1CE-EPR-1, an elbow-locked Fab, in complex with the erythropoeitin receptor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, AMMONIUM ION, ...
Authors:Singer, A.U, Bruce, H.A, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8X7A
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BU of 8x7a by Molmil
Treprostinil bound Prostacyclin Receptor G protein complex
Descriptor: 2-[[(1~{R},2~{R},3~{a}~{S},9~{a}~{S})-2-oxidanyl-1-[(3~{S})-3-oxidanyloctyl]-2,3,3~{a},4,9,9~{a}-hexahydro-1~{H}-cyclopenta[g]naphthalen-5-yl]oxy]ethanoic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, J.J, Jin, S, Zhang, H, Xu, Y, Hu, W, Jiang, Y, Chen, C, Wang, D.W, Xu, H.E, Wu, C.
Deposit date:2023-11-23
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Molecular recognition and activation of the prostacyclin receptor by anti-pulmonary arterial hypertension drugs.
Sci Adv, 10, 2024
8WMN
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BU of 8wmn by Molmil
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (symmetric 20-nt complementary)
Descriptor: DNA (62-MER), MAGNESIUM ION, PcrIIC1, ...
Authors:Zhang, S, Lin, S, Liu, J.J.G.
Deposit date:2023-10-04
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
8XAR
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BU of 8xar by Molmil
Structure-Based Design and Optimization of Methionine Adenosyltransferase 2A (MAT2A) Inhibitors with SAM and Compound 54
Descriptor: 1,2-ETHANEDIOL, 7-chloranyl-2-ethyl-5-pyridin-3-yl-pyrazolo[3,4-c]quinolin-4-one, CHLORIDE ION, ...
Authors:Zheng, J.Y, Zhang, G.P, Li, J.J, Tong, S.L.
Deposit date:2023-12-05
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Structure-Based Design and Optimization of Methionine Adenosyltransferase 2A (MAT2A) Inhibitors with High Selectivity, Brain Penetration, and In Vivo Efficacy.
J.Med.Chem., 67, 2024
9AVL
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Structure of human calcium-sensing receptor in complex with Gi3 protein in nanodiscs
Descriptor: (19R,22S,25R)-22,25,26-trihydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphahexacosan-19-yl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zuo, H, Park, J, Frangaj, A, Ye, J, Lu, G, Manning, J.J, Asher, W.B, Lu, Z, Hu, G, Wang, L, Mendez, J, Eng, E, Zhang, Z, Lin, X, Grasucci, R, Hendrickson, W.A, Clarke, O.B, Javitch, J.A, Conigrave, A.D, Fan, Q.R.
Deposit date:2024-03-04
Release date:2024-04-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Promiscuous G-protein activation by the calcium-sensing receptor.
Nature, 629, 2024
9AVG
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BU of 9avg by Molmil
Structure of human calcium-sensing receptor in complex with chimeric Gs (miniGis) protein in nanodiscs
Descriptor: (19R,22S,25R)-22,25,26-trihydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphahexacosan-19-yl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zuo, H, Park, J, Frangaj, A, Ye, J, Lu, G, Manning, J.J, Asher, W.B, Lu, Z, Hu, G, Wang, L, Mendez, J, Eng, E, Zhang, Z, Lin, X, Grasucci, R, Hendrickson, W.A, Clarke, O.B, Javitch, J.A, Conigrave, A.D, Fan, Q.R.
Deposit date:2024-03-02
Release date:2024-04-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Promiscuous G-protein activation by the calcium-sensing receptor.
Nature, 629, 2024
8WWX
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Ube1L acts akin to a mitt, that mediates UbcH8 binding and orchestrates "E1-E2" interaction
Descriptor: Ubiquitin-like modifier-activating enzyme 7
Authors:Dag, C, Elgin, E.S, Lee, W, Ziarek, J.J.
Deposit date:2023-10-27
Release date:2023-11-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ube1L acts akin to a mitt, that mediates UbcH8 binding and orchestrates "E1-E2" interaction
To Be Published
9AYF
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BU of 9ayf by Molmil
Structure of human calcium-sensing receptor in complex with Gi1 (miniGi1) protein in detergent
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(2-chlorophenyl)-N-[(1R)-1-(3-methoxyphenyl)ethyl]propan-1-amine, ...
Authors:Zuo, H, Park, J, Frangaj, A, Ye, J, Lu, G, Manning, J.J, Asher, W.B, Lu, Z, Hu, G, Wang, L, Mendez, J, Eng, E, Zhang, Z, Lin, X, Grasucci, R, Hendrickson, W.A, Clarke, O.B, Javitch, J.A, Conigrave, A.D, Fan, Q.R.
Deposit date:2024-03-07
Release date:2024-04-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Promiscuous G-protein activation by the calcium-sensing receptor.
Nature, 629, 2024
9AXF
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BU of 9axf by Molmil
Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in detergent
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(2-chlorophenyl)-N-[(1R)-1-(3-methoxyphenyl)ethyl]propan-1-amine, ...
Authors:Zuo, H, Park, J, Frangaj, A, Ye, J, Lu, G, Manning, J.J, Asher, W.B, Lu, Z, Hu, G, Wang, L, Mendez, J, Eng, E, Zhang, Z, Lin, X, Grasucci, R, Hendrickson, W.A, Clarke, O.B, Javitch, J.A, Conigrave, A.D, Fan, Q.R.
Deposit date:2024-03-06
Release date:2024-04-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Promiscuous G-protein activation by the calcium-sensing receptor.
Nature, 629, 2024
8WR4
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BU of 8wr4 by Molmil
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (non-targeting complex)
Descriptor: CbCas9 effector-1, DNA (62-MER), MAGNESIUM ION, ...
Authors:Zhang, S, Lin, S, Liu, J.J.G.
Deposit date:2023-10-13
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
9F6E
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BU of 9f6e by Molmil
Human DNA polymerase epsilon bound to DNA and PCNA (ajar conformation)
Descriptor: 2',3'-dideoxyadenosine triphosphate, DNA nascent strand, DNA polymerase epsilon catalytic subunit A, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
9F6D
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BU of 9f6d by Molmil
Human DNA polymerase epsilon bound to DNA and PCNA (open conformation)
Descriptor: 2',3'-dideoxyadenosine triphosphate, DNA nascent strand, DNA polymerase epsilon catalytic subunit A, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
8X79
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BU of 8x79 by Molmil
MRE-269 bound Prostacyclin Receptor G protein complex
Descriptor: 2-[4-[(5,6-diphenylpyrazin-2-yl)-propan-2-yl-amino]butoxy]ethanoic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, J.J, Jin, S, Zhang, H, Xu, Y, Hu, W, Jiang, Y, Chen, C, Wang, D.W, Xu, H.E, Wu, C.
Deposit date:2023-11-23
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:Molecular recognition and activation of the prostacyclin receptor by anti-pulmonary arterial hypertension drugs.
Sci Adv, 10, 2024
8VUA
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BU of 8vua by Molmil
Structure of FabS1CE1-EPR-1, an elbow-locked high affinity antibody for the erythropoeitin receptor
Descriptor: S1CE1 VARIANT OF FAB-EPR-1 heavy chain, S1CE1 VARIANT OF FAB-EPR-1 light chain
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
9F6L
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BU of 9f6l by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Mismatch Excision state)
Descriptor: CALCIUM ION, DNA nascent strand, DNA polymerase epsilon catalytic subunit A, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
9F6J
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BU of 9f6j by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Polymerase Arrest state)
Descriptor: DNA nascent strand, DNA polymerase epsilon catalytic subunit A, DNA template strand, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
8VD2
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BU of 8vd2 by Molmil
Human TCR ET650-4 in complex with DQ8-InsC8-15-IAPP1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hybrid insulin peptide (HIP; InsC8-15-IAPP23-29 ), MHC class II HLA-DQ-alpha chain, ...
Authors:Tran, T.M, Lim, J.J, Loh, T.Y, Mannering, I.S, Rossjohn, J, Reid, H.H.
Deposit date:2023-12-14
Release date:2024-08-07
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural basis of T cell cross-reactivity to native and spliced self-antigens presented by HLA-DQ8.
J.Biol.Chem., 2024
9F6I
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BU of 9f6i by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Post-Insertion state)
Descriptor: 2',3'-dideoxyadenosine triphosphate, CALCIUM ION, DNA nascent strand, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
8VQY
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BU of 8vqy by Molmil
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus methaqualone
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-methyl-3-(2-methylphenyl)quinazolin-4(3H)-one, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Chojnacka, W, Teng, J, Kim, J.J, Jensen, A.A, Hibbs, R.E.
Deposit date:2024-01-19
Release date:2024-06-26
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural insights into GABA A receptor potentiation by Quaalude.
Nat Commun, 15, 2024
8VDU
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BU of 8vdu by Molmil
Crystal structure of hybrid insulin peptide (InsC8-15-IAPP74-80) bound to HLA-DQ8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Hybrid insulin peptide (HIP; InsC8-15-IAPP74-80), ...
Authors:Tran, T.M, Lim, J.J, Loh, T.Y, Mannering, I.S, Rossjohn, J, Reid, H.H.
Deposit date:2023-12-17
Release date:2024-08-07
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A structural basis of T cell cross-reactivity to native and spliced self-antigens presented by HLA-DQ8.
J.Biol.Chem., 2024
9F6F
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BU of 9f6f by Molmil
Human DNA polymerase epsilon bound to DNA and PCNA (closed conformation)
Descriptor: 2',3'-dideoxyadenosine triphosphate, DNA nascent strand, DNA polymerase epsilon catalytic subunit A, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
8VCX
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BU of 8vcx by Molmil
Human TCR A2.13 in complex with DQ8-InsCpep
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Tran, T.M, Lim, J.J, Loh, T.J, Mannering, I.S, Rossjohn, J, Reid, H.H.
Deposit date:2023-12-14
Release date:2024-08-07
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:A structural basis of T cell cross-reactivity to native and spliced self-antigens presented by HLA-DQ8.
J.Biol.Chem., 2024
9F6K
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BU of 9f6k by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Frayed Substrate state)
Descriptor: DNA nascent strand, DNA polymerase epsilon catalytic subunit A, DNA template strand, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024

224004

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