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PDB: 4145 results

5XI5
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Crystal structure of T2R-TTL-PO5 complex
Descriptor: (3Z,6Z)-3-benzylidene-6-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Chu, Y, Wang, Y, Yang, J, Li, W.
Deposit date:2017-04-26
Release date:2017-10-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Synthesis, biological evaluation and X-ray structure of anti-microtubule agents
To Be Published
3QFM
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BU of 3qfm by Molmil
Crystal structure of Streptococcal asymmetric Ap4A hydrolase and phosphodiesterase Spr1479/SapH
Descriptor: FE (III) ION, MANGANESE (II) ION, Putative uncharacterized protein
Authors:Jiang, Y.L, Zhang, J.W, Yu, W.L, Cheng, W, Zhang, C.C, Zhou, C.Z, Chen, Y.
Deposit date:2011-01-22
Release date:2011-08-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and enzymatic characterization of a Streptococcal ATP/diadenosine polyphosphate and phosphodiester hydrolase Spr1479/SapH
To be Published
3JB9
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BU of 3jb9 by Molmil
Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Yan, C, Hang, J, Wan, R, Huang, M, Wong, C, Shi, Y.
Deposit date:2015-08-09
Release date:2015-09-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of a yeast spliceosome at 3.6-angstrom resolution
Science, 349, 2015
5ZND
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BU of 5znd by Molmil
8-mer nanotube derived from 24-mer rHuHF nanocage
Descriptor: Ferritin heavy chain
Authors:Wang, W.M, Wang, L.L, Zang, J.C, Chen, H, Zhao, G.H, Wang, H.F.
Deposit date:2018-04-09
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selective Elimination of the Key Subunit Interfaces Facilitates Conversion of Native 24-mer Protein Nanocage into 8-mer Nanorings.
J. Am. Chem. Soc., 140, 2018
4I3L
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BU of 4i3l by Molmil
Crystal structure of a metabolic reductase with 6-benzyl-1-hydroxy-4-methylpyridin-2(1H)-one
Descriptor: 6-benzyl-1-hydroxy-4-methylpyridin-2(1H)-one, Isocitrate dehydrogenase [NADP] cytoplasmic, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Zheng, B, Yao, Y, Liu, Z, Deng, L, Anglin, J.L, Jiang, H, Prasad, B.V.V, Song, Y.
Deposit date:2012-11-26
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.292 Å)
Cite:Crystallographic Investigation and Selective Inhibition of Mutant Isocitrate Dehydrogenase.
ACS Med Chem Lett, 4, 2013
5ZAK
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BU of 5zak by Molmil
Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate
Descriptor: Endoribonuclease Dicer, RISC-loading complex subunit TARBP2
Authors:Liu, Z, Wang, J, Cheng, H, Ke, X, Sun, L, Zhang, Q.C, Wang, H.-W.
Deposit date:2018-02-07
Release date:2018-05-09
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate.
Cell, 173, 2018
7DSZ
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BU of 7dsz by Molmil
Crystal structure of Amuc_1102 from Akkermansia muciniphila
Descriptor: Amuc_1102, CHLORIDE ION
Authors:Xiang, R, Wang, J, Wang, Y, Zhang, M, Wang, M.
Deposit date:2021-01-04
Release date:2021-02-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Amuc_1102 fromAkkermansia muciniphilaadopts animmunoglobulin-like fold related to archaeal type IV pilus
Biochem.Biophys.Res.Commun., 547, 2021
8DGG
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BU of 8dgg by Molmil
Structure of glycosylated LAG-3 homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Silberstein, J.L, Mathews, I.I, Frank, J.A, Chan, K.-W, Fernandez, D, Du, J, Wang, J, Kong, X.-P, Cochran, J.R.
Deposit date:2022-06-23
Release date:2022-08-17
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (3.78 Å)
Cite:Structural insights reveal interplay between LAG-3 homodimerization, ligand binding, and function.
Proc.Natl.Acad.Sci.USA, 121, 2024
3RBT
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BU of 3rbt by Molmil
Crystal structure of glutathione S-transferase Omega 3 from the silkworm Bombyx mori
Descriptor: GLYCEROL, Glutathione transferase o1
Authors:Chen, B.-Y, Ma, X.-X, Tan, X, Yang, J.-P, Zhang, N.-N, Li, W.-F, Chen, Y, Xia, Q, Zhou, C.-Z.
Deposit date:2011-03-29
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-guided activity restoration of the silkworm glutathione transferase Omega GSTO3-3
J.Mol.Biol., 412, 2011
3J9K
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BU of 3j9k by Molmil
Structure of Dark apoptosome in complex with Dronc CARD domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Apaf-1 related killer DARK, Caspase Nc
Authors:Pang, Y, Bai, X, Yan, C, Hao, Q, Chen, Z, Wang, J, Scheres, S.H.W, Shi, Y.
Deposit date:2015-02-04
Release date:2015-02-25
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of the apoptosome: mechanistic insights into activation of an initiator caspase from Drosophila.
Genes Dev., 29, 2015
4F5Y
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BU of 4f5y by Molmil
Crystal structure of human STING CTD complex with C-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, Transmembrane protein 173
Authors:Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP
Nat.Struct.Mol.Biol., 19, 2012
3LZI
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BU of 3lzi by Molmil
RB69 DNA Polymerase (Y567A) ternary complex with dATP Opposite 7,8-dihydro-8-oxoguanine
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3'), ...
Authors:Wang, M, Beckman, J, Blaha, G, Wang, J, Konigsberg, W.H.
Deposit date:2010-03-01
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substitution of Ala for Tyr567 in RB69 DNA polymerase allows dAMP to be inserted opposite 7,8-dihydro-8-oxoguanine .
Biochemistry, 49, 2010
8IQW
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BU of 8iqw by Molmil
AfFer(Asterias forbesii ferritin) mutant-P156H
Descriptor: Ferritin
Authors:Zhao, G, Zhang, C, Zang, J, Zhang, T.
Deposit date:2023-03-17
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Preparation and Unique Three-Dimensional Self-Assembly Property of Starfish Ferritin.
Foods, 12, 2023
8IQZ
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BU of 8iqz by Molmil
Asterias forbesii ferritin mutant-P156F
Descriptor: Ferritin
Authors:Zhao, G, Zhang, C, Zang, J, Zhang, T.
Deposit date:2023-03-17
Release date:2024-02-21
Method:X-RAY DIFFRACTION (4.19 Å)
Cite:Preparation and Unique Three-Dimensional Self-Assembly Property of Starfish Ferritin.
Foods, 12, 2023
3QFN
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BU of 3qfn by Molmil
Crystal structure of Streptococcal asymmetric Ap4A hydrolase and phosphodiesterase Spr1479/SapH in complex with inorganic phosphate
Descriptor: FE (III) ION, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Jiang, Y.L, Zhang, J.W, Yu, W.L, Cheng, W, Zhang, C.C, Zhou, C.Z, Chen, Y.
Deposit date:2011-01-22
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural and enzymatic characterization of a Streptococcal ATP/diadenosine polyphosphate and phosphodiester hydrolase Spr1479/SapH
To be Published
7TQB
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BU of 7tqb by Molmil
Crystal structure of monoclonal S9.6 Fab bound to DNA-RNA hybrid
Descriptor: DNA, FAB S9.6 Heavy Chain, FAB S9.6 Light Chain, ...
Authors:Bou-Nader, C, Zhang, J.
Deposit date:2022-01-26
Release date:2022-03-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of R-loop recognition by the S9.6 monoclonal antibody.
Nat Commun, 13, 2022
5XKH
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BU of 5xkh by Molmil
Crystal structure of T2R-TTL-CF1 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-[(4-methoxy-3-oxidanyl-phenyl)-methyl-amino]chromen-2-one, CALCIUM ION, ...
Authors:Wang, Y, Yang, J, Wang, T, Chen, L.
Deposit date:2017-05-07
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of a powerful and reversible microtubule-inhibitor with efficacy against multidrug-resistant tumors
To Be Published
6JVY
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BU of 6jvy by Molmil
Crystal structure of RBM38 in complex with single-stranded DNA
Descriptor: DNA (5'-D(*TP*GP*TP*GP*TP*GP*TP*GP*TP*GP*TP*G)-3'), RNA-binding protein 38, SULFATE ION
Authors:Qian, K, Li, M, Wang, J, Zhang, M, Wang, M.
Deposit date:2019-04-17
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural basis for mRNA recognition by human RBM38.
Biochem.J., 477, 2020
3TYH
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BU of 3tyh by Molmil
Crystal structure of oxo-cupper clusters binding to ferric binding protein from Neisseria gonorrhoeae
Descriptor: COPPER (II) ION, FbpA protein
Authors:Chen, W.J, Wang, H.F, Zhou, C.J, Ye, D.R, Huang, J, Tan, X.S, Zhong, W.Q.
Deposit date:2011-09-26
Release date:2012-09-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of oxo-cupper clusters binding to ferric binding protein from Neisseria gonorrhoeae
To be Published
6JB6
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BU of 6jb6 by Molmil
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
Deposit date:2019-01-25
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
To Be Published
7C3Y
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BU of 7c3y by Molmil
Crystal structure of the N-terminal domain of human MdmX protein in complex with Nutlin3a
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one, Protein Mdm4
Authors:Su, Z.D, Cheng, X.Y, Zhang, B.L, Kuang, Z.K, Yang, J, Li, Z.C, Yu, J.P, Zhao, Z.T, Cao, C.Z.
Deposit date:2020-05-14
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.632 Å)
Cite:Crystal structure of the N-terminal domain of human MdmX protein in complex with Nutlin3a
To Be Published
6JB7
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BU of 6jb7 by Molmil
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
Deposit date:2019-01-25
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
To Be Published
3J9L
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BU of 3j9l by Molmil
Structure of Dark apoptosome from Drosophila melanogaster
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Apaf-1 related killer DARK
Authors:Pang, Y, Bai, X, Yan, C, Hao, Q, Chen, Z, Wang, J, Scheres, S.H.W, Shi, Y.
Deposit date:2015-02-04
Release date:2015-02-25
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of the apoptosome: mechanistic insights into activation of an initiator caspase from Drosophila.
Genes Dev., 29, 2015
4HK4
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BU of 4hk4 by Molmil
Crystal structure of apo Tyrosine-tRNA ligase mutant protein
Descriptor: DI(HYDROXYETHYL)ETHER, Tyrosine--tRNA ligase
Authors:Yu, Y, Zhou, Q, Dong, J, Li, J, Xiaoxuan, L, Mukherjee, A, Ouyang, H, Nilges, M, Li, H, Gao, F, Gong, W, Lu, Y, Wang, J.
Deposit date:2012-10-15
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Crystal structure of apo Tyrosine-tRNA ligase mutant protein
To be Published
5E7C
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BU of 5e7c by Molmil
Macromolecular diffractive imaging using imperfect crystals - Bragg data
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Ayyer, K, Yefanov, O, Oberthuer, D, Roy-Chowdhury, S, Galli, L, Mariani, V, Basu, S, Coe, J, Conrad, C.E, Fromme, R, Schaffner, A, Doerner, K, James, D, Kupitz, C, Metz, M, Nelson, G, Xavier, P.L, Beyerlein, K.R, Schmidt, M, Sarrou, I, Spence, J.C.H, Weierstall, U, White, T.A, Yang, J.-H, Zhao, Y, Liang, M, Aquila, A, Hunter, M.S, Robinson, J.S, Koglin, J.E, Boutet, S, Fromme, P, Barty, A, Chapman, H.N.
Deposit date:2015-10-12
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Macromolecular diffractive imaging using imperfect crystals.
Nature, 530, 2016

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