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PDB: 164 results

1BVX
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BU of 1bvx by Molmil
THE 1.8 A STRUCTURE OF GEL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C, Helliwell, J.R.
Deposit date:1998-09-18
Release date:1998-09-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BWI
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BU of 1bwi by Molmil
THE 1.8 A STRUCTURE OF MICROBATCH OIL DROP GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
Deposit date:1998-09-24
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BWJ
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BU of 1bwj by Molmil
THE 1.8 A STRUCTURE OF MICROGRAVITY GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
Deposit date:1998-09-18
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1BWH
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BU of 1bwh by Molmil
THE 1.8 A STRUCTURE OF GROUND CONTROL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME
Descriptor: PROTEIN (LYSOZYME)
Authors:Dong, J, Boggon, T.J, Chayen, N.E, Raftery, J, Bi, R.C.
Deposit date:1998-09-24
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound-solvent structures for microgravity-, ground control-, gel- and microbatch-grown hen egg-white lysozyme crystals at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
5OCB
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BU of 5ocb by Molmil
Crystal structure of nitric oxide bound D97N mutant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, HEME C, NITRIC OXIDE, ...
Authors:Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2017-06-30
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
5OCF
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BU of 5ocf by Molmil
Crystal structure of nitric oxide bound to three-domain heme-Cu nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, HEME C, NITRIC OXIDE, ...
Authors:Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2017-06-30
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
5OBO
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BU of 5obo by Molmil
Crystal structure of nitrite bound D97N mutant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, GLYCEROL, HEME C, ...
Authors:Dong, J, Sasaki, D, Eady, R, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2017-06-28
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Activation of redox tyrosine switch is required for ligand binding at the catalytic site in heme-cu nitrite reductases
To be published
6VY4
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BU of 6vy4 by Molmil
Crystal structure of Hendra receptor binding protein head domain in complex with human neutralizing antibody HENV-32
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-Hendra receptor binding protein antibody HENV-32 Fab heavy chain, Anti-Hendra receptor binding protein antibody HENV-32 Fab light chain, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2020-02-25
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent Henipavirus Neutralization by Antibodies Recognizing Diverse Sites on Hendra and Nipah Virus Receptor Binding Protein.
Cell, 183, 2020
6VY6
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Crystal structure of Hendra receptor binding protein head domain in complex with human neutralizing antibody HENV-26
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-Hendra receptor binding protein antibody HENV-26 Fab heavy chain, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2020-02-25
Release date:2021-01-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Potent Henipavirus Neutralization by Antibodies Recognizing Diverse Sites on Hendra and Nipah Virus Receptor Binding Protein.
Cell, 183, 2020
6VY5
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BU of 6vy5 by Molmil
Crystal structure of Nipah receptor binding protein head domain in complex with human neutralizing antibody HENV-26
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-Hendra receptor binding protein antibody HENV-26 Fab heavy chain, Anti-Hendra receptor binding protein antibody HENV-26 Fab light chain, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2020-02-25
Release date:2021-01-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Potent Henipavirus Neutralization by Antibodies Recognizing Diverse Sites on Hendra and Nipah Virus Receptor Binding Protein.
Cell, 183, 2020
6P9H
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BU of 6p9h by Molmil
Crystal structure of human anti staphylococcus aureus antibody STAU-281 Fab in complex with IsdB NEAT2 domain
Descriptor: Human anti staphylococcus aureus antibody STAU-281 Fab heavy chain, Human anti staphylococcus aureus antibody STAU-281 Fab light chain, Iron-regulated heme-iron binding protein
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
6P9I
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BU of 6p9i by Molmil
crystal structure of human anti staphylococcus aureus antibody STAU-399 Fab
Descriptor: human anti staphylococcus aureus antibody STAU-399 Fab heavy chain, human anti staphylococcus aureus antibody STAU-399 Fab light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
6P9J
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BU of 6p9j by Molmil
crystal structure of human anti staphylococcus aureus antibody STAU-229 Fab
Descriptor: TRIS(HYDROXYETHYL)AMINOMETHANE, human anti staphylococcus aureus antibody STAU-229 Fab heavy chain, human anti staphylococcus aureus antibody STAU-229 Fab light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
6UIG
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BU of 6uig by Molmil
Crystal structure of human monoclonal antibody H7.200 in complex with H7N9 hemagglutinin HA1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, H7.200 Fab heavy chain, H7.200 Fab light chain, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-09-30
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Anti-influenza H7 human antibody targets antigenic site in hemagglutinin head domain interface.
J.Clin.Invest., 130, 2020
4TQN
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BU of 4tqn by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with UL04
Descriptor: 1,2-ETHANEDIOL, 3-[(5-acetyl-2-ethoxyphenyl)carbamoyl]benzoic acid, CREB-binding protein
Authors:Dong, J, Caflisch, A.
Deposit date:2014-06-11
Release date:2015-06-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of CREBBP Bromodomain Inhibitors by High-Throughput Docking and Hit Optimization Guided by Molecular Dynamics.
J.Med.Chem., 59, 2016
6P3S
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BU of 6p3s by Molmil
Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, Human Fab H5.28 heavy chain, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-05-24
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4 Å)
Cite:crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
To Be Published
6P3R
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BU of 6p3r by Molmil
crystal structure of human Fab H5.31 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-05-24
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human Fab H5.31 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
To Be Published
4RVZ
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BU of 4rvz by Molmil
Crystal structure of tRNA fluorescent labeling enzyme
Descriptor: MAGNESIUM ION, N-(4-aminobutyl)-2-azidoacetamide, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Dong, J, Li, F, Wang, J, Gong, W.
Deposit date:2014-11-29
Release date:2015-03-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A covalent approach for site-specific RNA labeling in Mammalian cells.
Angew.Chem.Int.Ed.Engl., 54, 2015
8HU4
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BU of 8hu4 by Molmil
Limosilactobacillus reuteri N1 GtfB
Descriptor: CITRIC ACID, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Dong, J.J, Bai, Y.X.
Deposit date:2022-12-22
Release date:2023-12-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Insights into the Structure-Function Relationship of GH70 GtfB alpha-Glucanotransferases from the Crystal Structure and Molecular Dynamic Simulation of a Newly Characterized Limosilactobacillus reuteri N1 GtfB Enzyme.
J.Agric.Food Chem., 72, 2024
4XNH
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BU of 4xnh by Molmil
Crystal structure of yeast N-terminal acetyltransferase NatE (IP6) in complex with a bisubstrate
Descriptor: ACETYL COENZYME *A, ACYH8, CARBOXYMETHYL COENZYME *A, ...
Authors:Dong, J, Wang, S, York, J.D.
Deposit date:2015-01-15
Release date:2016-07-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of yeast N-terminal acetyltransferase NatE (IP6) in complex with a bisubstrate
To Be Published
4XPD
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BU of 4xpd by Molmil
Crystal structure of yeast N-terminal acetyltransferase NatE (ppGpp) in complex with a bisubstrate
Descriptor: ACETYL COENZYME *A, CARBOXYMETHYL COENZYME *A, GUANOSINE-5',3'-TETRAPHOSPHATE, ...
Authors:Dong, J, Wang, S, York, J.D.
Deposit date:2015-01-16
Release date:2016-07-20
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structure of yeast N-terminal acetyltransferase NatE (ppGpp) in complex with a bisubstrate
To Be Published
4Y49
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BU of 4y49 by Molmil
Crystal structure of yeast N-terminal acetyltransferase (ppGpp) NatE in complex with a bisubstrate
Descriptor: ACETYL COENZYME *A, ALA-ALA-ALA-ALA-ALA-ALA, CARBOXYMETHYL COENZYME *A, ...
Authors:Dong, J, Wang, S, York, J.D.
Deposit date:2015-02-10
Release date:2016-07-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Crystal structure of yeast N-terminal acetyltransferase (ppGpp) NatE in complex with a bisubstrate
To Be Published
5JRP
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crystal structure of monoclonal antibody MR78 Fab
Descriptor: SODIUM ION, marberg virus monoclonal antibody MR78 Fab heavy chain, marberg virus monoclonal antibody MR78 Fab light chain
Authors:Dong, J, Crowe, J.
Deposit date:2016-05-06
Release date:2017-11-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of Non-local Interactions between CDR Loops in Binding Affinity of MR78 Antibody to Marburg Virus Glycoprotein.
Structure, 25, 2017
6AGG
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BU of 6agg by Molmil
Crystal structure of agmatine-AMPPCP-Mg complexed TiaS (tRNAIle2 agmatidine synthetase)
Descriptor: ACETATE ION, AGMATINE, AMMONIUM ION, ...
Authors:Dong, J.S, Gong, W.M.
Deposit date:2018-08-11
Release date:2018-09-05
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structure of tRNA-Modifying Enzyme TiaS and Motions of Its Substrate Binding Zinc Ribbon.
J. Mol. Biol., 430, 2018
7L7E
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BU of 7l7e by Molmil
Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, Spike protein S1, ...
Authors:Dong, J, Crowe, J.E.
Deposit date:2020-12-28
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Genetic and structural basis for SARS-CoV-2 variant neutralization by a two-antibody cocktail.
Nat Microbiol, 6, 2021

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