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4RG1
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BU of 4rg1 by Molmil
Methyltransferase domain of C9orf114
Descriptor: C9orf114, POLYETHYLENE GLYCOL (N=34), S-1,2-PROPANEDIOL, ...
Authors:Dong, A, Zeng, H, Walker, J.R, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2014-09-29
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The Crystal Structure of Human C9orf114 in complex with S-adenosyl-homocysteine
To be Published
5GJ4
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BU of 5gj4 by Molmil
Structure of NS2B-NS3 Protease from Zika Virus caught after self-cleavage
Descriptor: CHLORIDE ION, Serine protease NS3, Serine protease subunit NS2B
Authors:Phoo, W.W, Li, Y.
Deposit date:2016-06-27
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:Structure of the NS2B-NS3 protease from Zika virus after self-cleavage.
Nat Commun, 7, 2016
5H43
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BU of 5h43 by Molmil
Structural and mechanistical studies of the nuclear import by Importin-alpha
Descriptor: Histone acetyltransferase KAT8, Importin subunit alpha-1
Authors:Wang, R, Li, Y.
Deposit date:2016-10-28
Release date:2017-10-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the nuclear import of the histone acetyltransferase males-absent-on-the-first by importin alpha 1
Traffic, 19, 2018
8Y6P
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BU of 8y6p by Molmil
Structure of the auto-inhibited Dark monomer
Descriptor: Apaf-1 related killer DARK
Authors:Tian, L, Li, Y, Shi, Y.
Deposit date:2024-02-03
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Dark and Dronc activation in Drosophila melanogaster.
Proc.Natl.Acad.Sci.USA, 121, 2024
5H4I
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BU of 5h4i by Molmil
Unlinked NS2B-NS3 Protease from Zika Virus in complex with a compound fragment
Descriptor: ACETATE ION, NS2B cofactor, NS3 protease, ...
Authors:Zhang, Z.Z, Li, Y.
Deposit date:2016-10-31
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal structure of unlinked NS2B-NS3 protease from Zika virus
Science, 354, 2016
5FRS
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BU of 5frs by Molmil
Structure of the Pds5-Scc1 complex and implications for cohesin function
Descriptor: SISTER CHROMATID COHESION PROTEIN 1, SISTER CHROMATID COHESION PROTEIN PDS5
Authors:Muir, K.W, Kschonsak, M, Li, Y, Metz, J, Haering, C.H, Panne, D.
Deposit date:2015-12-22
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.073 Å)
Cite:Structure of the Pds5-Scc1 Complex and Implications for Cohesin Function
Cell Rep., 14, 2016
8Z1E
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BU of 8z1e by Molmil
A homotrimeric GPCR architecture of the human cytomegalovirus (UL78) revealed by cryo-EM
Descriptor: Uncharacterized protein UL78
Authors:Chen, Y, Li, Y, Zhou, Q, Cong, Z, Lin, S, Yan, J, Chen, X, Yang, D, Ying, T, Wang, M.-W.
Deposit date:2024-04-11
Release date:2024-05-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:A homotrimeric GPCR architecture of the human cytomegalovirus revealed by cryo-EM.
Cell Discov, 10, 2024
5FRP
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BU of 5frp by Molmil
Structure of the Pds5-Scc1 complex and implications for cohesin function
Descriptor: MCD1-LIKE PROTEIN, SISTER CHROMATID COHESION PROTEIN PDS5
Authors:Muir, K.W, Kschonsak, M, Li, Y, Metz, J, Haering, C.H, Panne, D.
Deposit date:2015-12-21
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.895 Å)
Cite:Structure of the Pds5-Scc1 Complex and Implications for Cohesin Function
Cell Rep., 14, 2016
4RO0
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BU of 4ro0 by Molmil
Crystal structure of MthK gating ring in a ligand-free form
Descriptor: Calcium-gated potassium channel MthK
Authors:Dong, W, Guo, R, Chai, H, Chen, Z, Cui, H, Ren, Z, Li, Y, Ye, S.
Deposit date:2014-10-27
Release date:2015-10-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:The principle of cooperative gating in a calcium-gated K+ channel
To be Published
4HJJ
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BU of 4hjj by Molmil
Structure Reveals Function of the Dual Variable Domain Immunoglobulin (DVD-Ig) Molecule
Descriptor: Anti-IL12 Anti-IL18 DFab Heavy Chain, Anti-IL12 Anti-IL18 DFab Light Chain, CHLORIDE ION, ...
Authors:Jakob, C.G, Edalji, R, Judge, R.A, DiGiammarino, E, Li, Y, Gu, J, Ghayur, T.
Deposit date:2012-10-12
Release date:2013-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure reveals function of the dual variable domain immunoglobulin (DVD-Ig[TM]) molecule
MAbs, 5, 2013
3S44
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BU of 3s44 by Molmil
Crystal Structure of Pasteurella multocida sialyltransferase M144D mutant with CMP bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CMP-3F(a)-Neu5Ac
Authors:Sugiarto, G, Lau, K, Li, Y, Lim, S, Ames, J.B, Le, D.-T, Fisher, A.J, Chen, X.
Deposit date:2011-05-18
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Sialyltransferase Mutant with Decreased Donor Hydrolysis and Reduced Sialidase Activities for Directly Sialylating Lewis(x).
Acs Chem.Biol., 7, 2012
3S6K
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BU of 3s6k by Molmil
Crystal structure of xcNAGS
Descriptor: Acetylglutamate kinase
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-18
Method:X-RAY DIFFRACTION (2.8018 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S7Y
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BU of 3s7y by Molmil
Crystal structure of mmNAGS in Space Group P3121 at 4.3 A resolution
Descriptor: N-acetylglutamate kinase / N-acetylglutamate synthase
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-27
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.3077 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
4IJ8
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BU of 4ij8 by Molmil
Crystal structure of the complex of SETD8 with SAM
Descriptor: N-lysine methyltransferase SETD8, S-ADENOSYLMETHIONINE, UNKNOWN ATOM OR ION, ...
Authors:Yu, W, Tempel, W, Li, Y, El Bakkouri, M, Shapira, M, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2012-12-21
Release date:2013-01-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex of SETD8 with SAM
To be Published
2C7U
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BU of 2c7u by Molmil
Conflicting selective forces affect CD8 T-cell receptor contact sites in an HLA-A2 immunodominant HIV epitope.
Descriptor: BETA-2-MICROGLOBULIN, GAG PROTEIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Iversen, A.K, Stewart-Jones, G, Learn, G.H, Christie, N, Sylvester-Hviid, C, Armitage, A.E, Kaul, R, Beattie, T, Lee, J.K, Li, Y, Chotiyarnwong, P, Dong, T, Xu, X, Luscher, M.A, MacDonald, K, Ullum, H, Klarlund-Pedersen, B, Skinhoj, P, Fugger, J.L, Buus, S, Mullins, J.I, Jones, E.Y, van der Merwe, P.A, McMichael, A.J.
Deposit date:2005-11-29
Release date:2006-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Conflicting Selective Forces Affect T Cell Receptor Contacts in an Immunodominant Human Immunodeficiency Virus Epitope.
Nat.Immunol., 7, 2006
3S6G
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BU of 3s6g by Molmil
Crystal structures of Seleno-substituted mutant mmNAGS in space group P212121
Descriptor: 1,2-ETHANEDIOL, COENZYME A, MALONATE ION, ...
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6681 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S6H
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BU of 3s6h by Molmil
Crystal structure of native mmNAGS/k
Descriptor: COENZYME A, GLUTAMIC ACID, N-acetylglutamate kinase / N-acetylglutamate synthase
Authors:Shi, D, Li, Y, Cabrera-Luque, J, Jin, Z, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3SP6
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BU of 3sp6 by Molmil
Structural basis for iloprost as a dual PPARalpha/delta agonist
Descriptor: (5E)-5-[(3aS,4R,5R,6aS)-5-hydroxy-4-[(1E,3S,4R)-3-hydroxy-4-methyloct-1-en-6-yn-1-yl]hexahydropentalen-2(1H)-ylidene]pentanoic acid, Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma coactivator 1-beta
Authors:Rong, H, Li, Y.
Deposit date:2011-07-01
Release date:2011-07-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis for iloprost as a dual peroxisome proliferator-activated receptor alpha/delta agonist.
J.Biol.Chem., 286, 2011
4H5S
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BU of 4h5s by Molmil
Complex structure of Necl-2 and CRTAM
Descriptor: Cell adhesion molecule 1, Cytotoxic and regulatory T-cell molecule
Authors:Zhang, S, Lu, G, Qi, J, Li, Y, Zhang, Z, Zhang, B, Yan, J, Gao, G.F.
Deposit date:2012-09-18
Release date:2013-08-07
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Competition of cell adhesion and immune recognition: insights into the interaction between CRTAM and nectin-like 2.
Structure, 21, 2013
8JR9
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BU of 8jr9 by Molmil
Small molecule agonist (PCO371) bound to human parathyroid hormone receptor type 1 (PTH1R)
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha-1, ...
Authors:Zhao, L, He, Q, Yuan, Q, Gu, Y, He, X, Shan, H, Li, J, Wang, K, Li, Y, Hu, W, Wu, K, Shen, J, Xu, H.E.
Deposit date:2023-06-16
Release date:2023-08-02
Last modified:2023-10-04
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Conserved class B GPCR activation by a biased intracellular agonist.
Nature, 621, 2023
2AWZ
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BU of 2awz by Molmil
Hepatitis C Virus NS5b RNA Polymerase in complex with a covalent inhibitor (5h)
Descriptor: 5R-(4-BROMOPHENYLMETHYL)-3-(BENZENESULFONYLAMINO)-4-OXO-2-THIONOTHIAZOLIDINE, Genome polyprotein, SULFATE ION
Authors:Powers, J.P, Piper, D.E, Li, Y, Mayorga, V, Anzola, J, Chen, J.M, Jaen, J.C, Lee, G, Liu, J, Peterson, M.G, Tonn, G.R, Ye, Q, Walker, N.P, Wang, Z.
Deposit date:2005-09-02
Release date:2006-01-24
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:SAR and Mode of Action of Novel Non-Nucleoside Inhibitors of Hepatitis C NS5b RNA Polymerase.
J.Med.Chem., 49, 2006
3SP9
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BU of 3sp9 by Molmil
Structural basis for iloprost as a dual PPARalpha/delta agonist
Descriptor: (5E)-5-[(3aS,4R,5R,6aS)-5-hydroxy-4-[(1E,3S,4R)-3-hydroxy-4-methyloct-1-en-6-yn-1-yl]hexahydropentalen-2(1H)-ylidene]pentanoic acid, Peroxisome proliferator-activated receptor delta
Authors:Rong, H, Li, Y.
Deposit date:2011-07-01
Release date:2011-07-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for iloprost as a dual peroxisome proliferator-activated receptor alpha/delta agonist.
J.Biol.Chem., 286, 2011
2AI3
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BU of 2ai3 by Molmil
Purine nucleoside phosphorylase from calf spleen
Descriptor: (2S,4R,6R,6AS)-4-(2-AMINO-6-OXO-1,6-DIHYDROPURIN-9-YL)-6-(HYDROXYMETHYL)-TETRAHYDROFURO[3,4-D][1,3]DIOXOL-2-YLPHOSPHONI C ACID, MAGNESIUM ION, Purine nucleoside phosphorylase, ...
Authors:Toms, A.V, Wang, W, Li, Y, Ganem, B, Ealick, S.E.
Deposit date:2005-07-28
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel multisubstrate inhibitors of mammalian purine nucleoside phosphorylase.
Acta Crystallogr.,Sect.D, 61, 2005
2B2X
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BU of 2b2x by Molmil
VLA1 RdeltaH I-domain complexed with a quadruple mutant of the AQC2 Fab
Descriptor: Antibody AQC2 Fab, Integrin alpha-1, MAGNESIUM ION
Authors:Clark, L.A, Boriack-Sjodin, P.A, Eldredge, J, Fitch, C, Friedman, B, Hanf, K.J, Jarpe, M, Liparoto, S.F, Li, Y, Lugovskoy, A.
Deposit date:2005-09-19
Release date:2006-04-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Affinity enhancement of an in vivo matured therapeutic antibody using structure-based computational design
Protein Sci., 15, 2006
2AHU
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BU of 2ahu by Molmil
Crystal structure of Acyl-CoA transferase (YdiF) apoenzyme from Escherichia coli O157:H7.
Descriptor: putative enzyme ydiF
Authors:Rangarajan, E.S, Li, Y, Ajamian, E, Iannuzzi, P, Kernaghan, S.D, Fraser, M.E, Cygler, M, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2005-07-28
Release date:2005-11-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic trapping of the glutamyl-CoA thioester intermediate of family I CoA transferases.
J.Biol.Chem., 280, 2005

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