[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,280 items for (author: xing & y)

EMDB-61005:
Tetragon ring reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61007:
Pentagon reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61010:
Hexagon reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61017:
Heptagonal reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61020:
tetragon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61021:
Pentagon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61022:
Hexagon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-61023:
Heptagon vertex reconstruction of the BAX ring
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-60977:
Overall reconstruction of the Bax line
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

PDB-9ixu:
Overall reconstruction of the Bax line
Method: single particle / : Zhang Y, Tian L, Ge X, Huang G, Shi Y

EMDB-70416:
Cryo-EM Structure of Human HIF-2a-ARNT Complexed on 20-bp HRE
Method: single particle / : Xu X, Closson JD, Zhang M, Gardner KH

EMDB-70418:
Dimer of HIF-2a-ARNT Heterodimers Complexed on 51-bp HRE/HAS
Method: single particle / : Closson JD, Xu X, Gardner KH

EMDB-70443:
Dimer of HIF-1a-ARNT Heterodimers Complexed on 52-bp HRE/HAS
Method: single particle / : Closson JD, Tiyani TT, Xu X, Gardner KH

PDB-9of0:
Cryo-EM Structure of Human HIF-2a-ARNT Complexed on 20-bp HRE
Method: single particle / : Xu X, Closson JD, Zhang M, Gardner KH

PDB-9of2:
Dimer of HIF-2a-ARNT Heterodimers Complexed on 51-bp HRE/HAS
Method: single particle / : Closson JD, Xu X, Gardner KH

PDB-9ofu:
Dimer of HIF-1a-ARNT Heterodimers Complexed on 52-bp HRE/HAS
Method: single particle / : Closson JD, Tiyani TT, Xu X, Gardner KH

EMDB-60822:
MultiBody Refinement of dimeric DARPin and its bound GFP on a symmetric scaffold
Method: single particle / : Lu X, Yan M, Zhang HM, Hao Q

EMDB-60931:
24-mer DARPin-apoferritin scaffold in complex with the maltose binding protein
Method: single particle / : Lu X, Yan M, Zhang HM, Hao Q

EMDB-61130:
GFP bound to 24-mer DARPin-apoferritin model 6c
Method: single particle / : Lu X, Yan M, Zhang HM, Hao Q

PDB-9irv:
MultiBody Refinement of dimeric DARPin and its bound GFP on a symmetric scaffold
Method: single particle / : Lu X, Yan M, Zhang HM, Hao Q

PDB-9ivp:
24-mer DARPin-apoferritin scaffold in complex with the maltose binding protein
Method: single particle / : Lu X, Yan M, Zhang HM, Hao Q

PDB-9j48:
GFP bound to 24-mer DARPin-apoferritin model 6c
Method: single particle / : Lu X, Yan M, Zhang HM, Hao Q

EMDB-61851:
Cryo-EM of Zingibroside R1 nanofibrils
Method: helical / : Peng Q, Song H

EMDB-62757:
hDEK-nucleosome complex (conformation 1)
Method: single particle / : Liu Y, Wang C, Huang H

EMDB-62766:
hDEK-nucleosome complex (conformation 2)
Method: single particle / : Liu Y, Wang C, Huang H

PDB-9l1x:
hDEK-nucleosome complex (conformation 1)
Method: single particle / : Liu Y, Wang C, Huang H

PDB-9l22:
hDEK-nucleosome complex (conformation 2)
Method: single particle / : Liu Y, Wang C, Huang H

EMDB-50836:
Rubisco in native beta-carboxysomes
Method: subtomogram averaging / : Sheng Y, Hardenbrook N, Li K

PDB-9fwv:
Rubisco in native beta-carboxysomes
Method: subtomogram averaging / : Sheng Y, Hardenbrook N, Li K

EMDB-60594:
Cryo-EM structure of hetero-bacterioferritin SoBfr12 from Shewanella oneidensis
Method: single particle / : Gao HC, Chen JH, Li YX

PDB-9iig:
Cryo-EM structure of hetero-bacterioferritin SoBfr12 from Shewanella oneidensis
Method: single particle / : Gao HC, Chen JH, Li YX

EMDB-63694:
Cryo-EM structure of enterovirus A71 mature virion in complex with Fab CT11F9
Method: single particle / : Jiang Y, Zhu R, Zheng Q, Li S, Xia N

PDB-9m7v:
Cryo-EM structure of enterovirus A71 mature virion in complex with Fab CT11F9
Method: single particle / : Jiang Y, Zhu R, Zheng Q, Li S, Xia N

EMDB-39671:
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with magnesium-free solutions.
Method: single particle / : Chen JH, Zheng Q, Zhang X

EMDB-39683:
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with magnesium solutions
Method: single particle / : Chen JH, Zheng Q, Zhang X

EMDB-62419:
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with EDTA-2Na-containing solutions
Method: single particle / : Chen JH

PDB-8yy9:
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with magnesium-free solutions.
Method: single particle / : Chen JH, Zheng Q, Zhang X

PDB-8yz2:
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with magnesium solutions
Method: single particle / : Chen JH, Zheng Q, Zhang X

PDB-9km0:
Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with EDTA-2Na-containing solutions
Method: single particle / : Chen JH

EMDB-60921:
Cryo-EM structure of human NCX1 in PIP2 diC8 bound state
Method: single particle / : Xue J, Jiang Y

PDB-9iv8:
Cryo-EM structure of human NCX1 in PIP2 diC8 bound state
Method: single particle / : Xue J, Jiang Y

EMDB-60524:
Cryo-EM structure of MRCoV RBD in complex with mink ACE2
Method: single particle / : Ji W, Zhang S

PDB-8zwe:
Cryo-EM structure of MRCoV RBD in complex with mink ACE2
Method: single particle / : Ji W, Zhang S

EMDB-39624:
Cryo-EM structure of apo human mitochondrial pyruvate carrier in the IMS-open conformation at pH 8.0
Method: single particle / : Shi JH, Liang JM, Ma D

EMDB-39625:
Cryo-EM structure of human mitochondrial pyruvate carrier in complex with the inhibitor UK5099
Method: single particle / : Shi JH, Liang JM, Ma D

EMDB-39626:
Cryo-EM structure of human mitochondrial pyruvate carrier in the matrix-facing conformation at pH 6.8
Method: single particle / : Shi JH, Liang JM, Ma D

EMDB-62464:
Cryo-EM structure of apo human mitochondrial pyruvate carrier in the IMS-open conformation at pH 6.8
Method: single particle / : Shi JH, Liang JM, Ma D

EMDB-62465:
Cryo-EM structure of human mitochondrial pyruvate carrier in the occluded conformation at pH 6.8
Method: single particle / : Shi JH, Liang JM, Ma D

EMDB-62466:
Cryo-EM structure of pyruvate-treated human mitochondrial pyruvate carrier in the IMS-open conformation at pH 8.0
Method: single particle / : Shi JH, Liang JM, Ma D

PDB-8yw6:
Cryo-EM structure of apo human mitochondrial pyruvate carrier in the IMS-open conformation at pH 8.0
Method: single particle / : Shi JH, Liang JM, Ma D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more