[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,827 items for (author: xing & y)

EMDB-66467:
Cryo-EM structure of Borna disease virus RNA polymerase complex
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

EMDB-66473:
Cryo-EM structure of Borna disease virus RNA polymerase L protein
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

EMDB-66595:
Cryo-EM structure of Borna disease virus RNA-directed RNA polymerase in complex with Suramin
Method: single particle / : Ma J, Yang K, Wu H, Liang Z, Zou J

PDB-9x1v:
Cryo-EM structure of Borna disease virus RNA polymerase complex
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

PDB-9x28:
Cryo-EM structure of Borna disease virus RNA polymerase L protein
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

PDB-9x5r:
Cryo-EM structure of Borna disease virus RNA-directed RNA polymerase in complex with Suramin
Method: single particle / : Ma J, Yang K, Wu H, Liang Z, Zou J

EMDB-71891:
Human Cullin-4 in complex with CAND2
Method: single particle / : Kenny S, Liu X, Das C

PDB-9pvh:
Human Cullin-4 in complex with CAND2
Method: single particle / : Kenny S, Liu X, Das C

EMDB-65233:
Composite map of Type II-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Xiao YB

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-70888:
Structure of Geobacillus stearothermophilus RNase P ribozyme
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70891:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 1
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70892:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 2
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70893:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 3
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70896:
Structure of Geobacillus stearothermophilus RNase P ribozyme in 5 mM Mg2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70897:
Structure of Geobacillus stearothermophilus RNase P ribozyme in 10 mM Mg2+
Method: single particle / : Lee YT, Skeparnias I, Stagno JR, Wang YX

EMDB-70933:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70935:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70936:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 10 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70994:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 1)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70995:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70996:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 3)
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9ov3:
Structure of Geobacillus stearothermophilus RNase P ribozyme
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9ov6:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 1
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9ov7:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 2
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9ov8:
Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 3
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9ovb:
Structure of Geobacillus stearothermophilus RNase P ribozyme in 5 mM Mg2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9ovc:
Structure of Geobacillus stearothermophilus RNase P ribozyme in 10 mM Mg2+
Method: single particle / : Lee YT, Skeparnias I, Stagno JR, Wang YX

PDB-9owj:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9owl:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9owm:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 10 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9oy2:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 1)
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9oy3:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)
Method: single particle / : Lee YT, Stagno JR, Wang YX

PDB-9oy4:
Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 3)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-65528:
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65529:
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

EMDB-65530:
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

EMDB-65531:
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

EMDB-65532:
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65533:
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Method: single particle / : LI ZX, Kong JP, Wu WQ

EMDB-65534:
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65535:
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65536:
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65537:
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Method: single particle / : LI ZX, Kong JP, Wu WQ

EMDB-65538:
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65539:
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65540:
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 4
Method: single particle / : Li ZX, Kong JP, Wu WQ

EMDB-65541:
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 4
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

EMDB-65542:
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 4
Method: single particle / : Li ZX, Kong JP, Wu WQ, Xiao YB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more