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Showing all 42 items for (author: wade & pa)

EMDB-55210:
In situ cryo-ET tomogram of HeLa TMEM192-3xHA Control cell showcasing an endolysosomal structure.
Method: electron tomography / : Kraus F, Li D, Wilfling F, Harper JW

EMDB-55211:
In situ cryo-ET tomogram of HeLa TMEM192-3xHA ASAH1-/- cell showcasing an endolysosomal structure
Method: electron tomography / : Kraus F, Li D, Wilfling F, Harper JW

EMDB-51701:
In situ cryo-electron tomogram of a multi-lamellar vesicle in a NPC2-/- HeLa cell. #1
Method: electron tomography / : Kraus F, He Y, Swarup S, Overmyer KA, Jiang Y, Brenner J, Capitanio C, Bieber A, Jen A, Nightingale NM, Anderson BJ, Lee C, Paulo JA, Smith IR, Plitzko JM, Gygi SP, Schulman BA, Wilfling F, Coon JJ, Harper JW

EMDB-51702:
In situ cryo-electron tomogram of a multi-lamellar vesicle in a NPC2-/- HeLa cell. #2
Method: electron tomography / : Kraus F, He Y, Swarup S, Overmyer KA, Jiang Y, Brenner J, Capitanio C, Bieber A, Jen A, Nightingale NM, Anderson BJ, Lee C, Paulo JA, Smith IR, Plitzko JM, Gygi SP, Schulman BA, Wilfling F, Coon JJ, Harper JW

EMDB-42954:
ACAD11 D220A with 4-hydroxyvaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-42955:
ACAD11 D753N with 4-phosphovaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

PDB-8v3u:
ACAD11 D220A with 4-hydroxyvaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

PDB-8v3v:
ACAD11 D753N with 4-phosphovaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-46644:
Cryo-EM structure of a trapped ARIH1-diUB-CRL2-KLHDC10 complex - consensus map
Method: single particle / : Chittori S, Scott DC, Schulman BA

EMDB-46645:
Focused map of Cryo-EM structure of Ubiquitin C-degron bound to KLHDC10-EloB/C
Method: single particle / : Chittori S, Scott DC, Schulman BA

PDB-9d8p:
Focused map of Cryo-EM structure of Ubiquitin C-degron bound to KLHDC10-EloB/C
Method: single particle / : Chittori S, Scott DC, Schulman BA

EMDB-51460:
Tomogram of aggregate in AgDD-sfGFP-expressing HEK293 cell 6 h post aggregation induction
Method: electron tomography / : Schaefer T, Fernandez-Busnadiego R

EMDB-51461:
Tomogram of aggregate in AgDD-sfGFP-expressing HEK293 cell 10 min post aggregation induction
Method: electron tomography / : Schaefer T, Fernandez-Busnadiego R

EMDB-16903:
60S ribosomal subunit bound to the E3-UFM1 complex (native, UFM1 pulldown)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

EMDB-16880:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

EMDB-16902:
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

EMDB-16905:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
Method: single particle / : Penchev I, DaRosa PA, Peter JJ, Kulathu Y, Becker T, Beckmann R, Kopito R

EMDB-16908:
60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

PDB-8ohd:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

PDB-8oj0:
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

PDB-8oj5:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
Method: single particle / : Penchev I, DaRosa PA, Peter JJ, Kulathu Y, Becker T, Beckmann R, Kopito R

PDB-8oj8:
60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

EMDB-19194:
In situ cryo-electron tomogram of an autophagosome in the projection of an iPSC-derived neuron #2
Method: electron tomography / : Hoyer MJ, Capitanio C, Smith IR, Paoli JC, Bieber A, Jiang Y, Paulo JA, Gonzalez-Lozano MA, Baumeister W, Wilfling F, Schulman BA, Harper WJ

EMDB-19346:
In situ cryo-electron tomogram of an autophagosome in the projection of an iPSC-derived neuron #1
Method: electron tomography / : Hoyer MJ, Capitanio C, Smith IR, Paoli JC, Bieber A, Jiang Y, Paulo JA, Gonzalez-Lozano MA, Baumeister W, Wilfling F, Schulman BA, Harper WJ

EMDB-22260:
Structure of P5A-ATPase Spf1, Apo form
Method: single particle / : Park E, Sim SI

EMDB-22261:
Structure of P5A-ATPase Spf1, AMP-PCP-bound form
Method: single particle / : Park E, Sim SI

EMDB-22262:
Structure of P5A-ATPase Spf1, AlF4-bound form
Method: single particle / : Park E, Sim SI

EMDB-22263:
Structure of P5A-ATPase Spf1, BeF3-bound form
Method: single particle / : Park E, Sim SI

EMDB-22264:
Structure of P5A-ATPase Spf1, endogenous substrate-bound
Method: single particle / : Park E, Sim SI

PDB-6xmp:
Structure of P5A-ATPase Spf1, Apo form
Method: single particle / : Park E, Sim SI

PDB-6xmq:
Structure of P5A-ATPase Spf1, AMP-PCP-bound form
Method: single particle / : Park E, Sim SI

PDB-6xms:
Structure of P5A-ATPase Spf1, AlF4-bound form
Method: single particle / : Park E, Sim SI

PDB-6xmt:
Structure of P5A-ATPase Spf1, BeF3-bound form
Method: single particle / : Park E, Sim SI

PDB-6xmu:
Structure of P5A-ATPase Spf1, endogenous substrate-bound
Method: single particle / : Park E, Sim SI

EMDB-0783:
The pioneer transcription factor GATA3 bound to nucleosome
Method: single particle / : Tanaka H, Takizawa Y, Takaku M, Kato D, Kumagawa Y, Grimm SA, Wade PA, Kurumizaka H

EMDB-11457:
Mbf1-ribosome complex
Method: single particle / : Best KM, Denk T

PDB-6zvi:
Mbf1-ribosome complex
Method: single particle / : Best KM, Denk T, Cheng J, Thoms M, Berninghausen O, Beckmann R

EMDB-11456:
EDF1-ribosome complex
Method: single particle / : Best KM, Denk T

PDB-6zvh:
EDF1-ribosome complex
Method: single particle / : Best KM, Denk T, Cheng J, Thoms M, Berninghausen O, Beckmann R

EMDB-6838:
Nucleosome with ALB1 enhancer DNA sequence
Method: single particle / : Takizawa Y, Tanaka H, Machida S, Koyama M, Maehara K, Ohkawa Y, Wade PA, Wolf M, Kurumizaka H

EMDB-6898:
Nucleosome with ALB1 enhancer DNA sequence, no symmetry applied
Method: single particle / : Takizawa Y, Tanaka H, Machida S, Koyama M, Maehara K, Ohkawa Y, Wade PA, Wolf M, Kurumizaka H

EMDB-2783:
siRNA Nanoring
Method: single particle / : Afonin KA, Viard M, Koyfman AY, Martins AN, Kasprzak WK, Panigaj M, Desai R, Santhanam A, Grabow WW, Jaeger L, Heldman E, Reiser J, Chiu W, Freed EO, Shapiro BA

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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