[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 995 items for (author: san & martin & c)

EMDB-53943:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-54009:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rfw:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rja:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-54176:
CryoEM structure of the spike S protein trimer of the omicron BA.1 variant prepared in the presence of compound II-Na salt
Method: single particle / : Llacer JL, Lopez ML

EMDB-72527:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 97_F7 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72528:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 88_B4 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72529:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 3_H2 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72530:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 49_C09 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72531:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 33_C08 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72532:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 33_C02 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72533:
Negative stain map of A/California/07/2009 H1N1 HA in complex with 18_D11 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72534:
Negative stain map of A/New York/631/1996 H3N2 HA in complex with 97_F7 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72535:
Negative stain map of A/New York/631/1996 H3N2 HA in complex with 88_B4 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72536:
Negative stain map of A/New York/631/1996 H3N2 HA in complex with 33_C08 IgG
Method: single particle / : Jo G, Ward AB

EMDB-72537:
Negative stain map of A/New York/631/1996 H3N2 HA in complex with 18_D11 IgG
Method: single particle / : Jo G, Ward AB

EMDB-55743:
Cryo-EM structure of Heyndrickxia coagulans beta-galactosidase
Method: single particle / : Sanita G, Maresca E, Aulitto M, Capaldi S, Esposito E, Contursi P

PDB-9ta3:
Cryo-EM structure of Heyndrickxia coagulans beta-galactosidase
Method: single particle / : Sanita G, Maresca E, Aulitto M, Capaldi S, Esposito E, Contursi P

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9pit:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

PDB-9piv:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-48668:
Activated Leptotrichia buccalis (Lbu) CRISPR-Cas13a bound to AI-designed anti-CRISPR AIcrVIA1
Method: single particle / : Taveneau C, Knott GJ

PDB-9mvs:
Activated Leptotrichia buccalis (Lbu) CRISPR-Cas13a bound to AI-designed anti-CRISPR AIcrVIA1
Method: single particle / : Taveneau C, Knott GJ

EMDB-48337:
FnoCas12a bridge helix variant state 1
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48338:
FnoCas12a bridge helix variant state 2
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48339:
FnoCas12a bridge helix variant state 3
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48340:
FnoCas12a bridge helix variant state 4a
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-48341:
FnoCas12a bridge helix variant state 4b
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkt:
FnoCas12a bridge helix variant state 1
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mku:
FnoCas12a bridge helix variant state 2
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkv:
FnoCas12a bridge helix variant state 3
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkw:
FnoCas12a bridge helix variant state 4a
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

PDB-9mkx:
FnoCas12a bridge helix variant state 4b
Method: single particle / : Ganguly C, Thomas LM, Aribam SD, Martin L, Rajan R

EMDB-49520:
Focused refinement of the prefusion F glycoprotein ectodomain of Nipah virus in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-51820:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-51899:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52095:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52299:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h3g:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h6i:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hes:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hmw:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-53065:
Respiratory supercomplex from Mycobacterium smegmatis with decylubiquinone
Method: single particle / : Kovalova T, Krol S, Brzezinski P, Hogbom M

PDB-9qef:
Respiratory supercomplex from Mycobacterium smegmatis with decylubiquinone
Method: single particle / : Kovalova T, Krol S, Brzezinski P, Hogbom M

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-51635:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

PDB-9gvg:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more