[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,430 items for (author: rina & h)


EMDB Unreleased entry

EMDB-51874:
Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)
Method: single particle / : Singh V, Shiriaev D, Khawaja A, Rorbach J

PDB-9h52:
Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)
Method: single particle / : Singh V, Shiriaev D, Khawaja A, Rorbach J


EMDB Unreleased entry

EMDB-56861:
In situ ribosome from HeLa cells
Method: subtomogram averaging / : Gemin O, Babenko A, Papp G


EMDB Unreleased entry

EMDB-77136:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the closed state
Method: single particle / : Khau J, Nadezhdin KD, Purohit R, Sobolevsky AI

PDB-13ll:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the closed state
Method: single particle / : Khau J, Nadezhdin KD, Purohit R, Sobolevsky AI


EMDB Unreleased entry

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB


EMDB Unreleased entry

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB


EMDB Unreleased entry

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-54129:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

EMDB-54130:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

EMDB-54131:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
Method: single particle / : Singh V, Shiriaev DI, Khawaja A, Rorbach J

EMDB-54163:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

EMDB-57663:
human mitochondrial ribosome small subunit: Initiation complex with IF3 (State I2)
Method: single particle / : Singh V, Shiriaev D, Khawaja A, Rorbach J

EMDB-57667:
Human mitochondrial small ribosomal subunit: Initiation complex with IF2 and IF3 (State I3)
Method: single particle / : Singh V, Khawaja A, Shiriaev D

EMDB-57668:
Human mitochondrial small ribosomal subunit: Initiation complex with IF2 and tRNA (state I4)
Method: single particle / : Singh V, Shiriaev D, Khawaja A, Rorbach J

EMDB-57669:
Human mitochondrial small ribosomal subunit: Assembly intermediate with IF3 and RBFA-out (state I1)
Method: single particle / : Singh V, Shiriaev D, Khawaja A, Rorbach J

PDB-9ror:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

PDB-9rot:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

PDB-9rov:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

PDB-9rpf:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

EMDB-71680:
Closed-state structure of wild-type human TRPV3 purified in GDN detergent
Method: single particle / : Purohit R, Khau J, Nadezhdin KD, Sobolevsky AI

EMDB-71681:
Inactivated-state structure of wild-type human TRPV3 purified in GDN detergent
Method: single particle / : Purohit R, Khau J, Nadezhdin KD, Sobolevsky AI

EMDB-77134:
Structure of human TRPV3-G568C Olmsted syndrome mutant in the closed state
Method: single particle / : Khau J, Purohit R, Nadezhdin KD, Sobolevsky AI

EMDB-77135:
Structure of human TRPV3-G568C Olmsted syndrome mutant in the open state
Method: single particle / : Khau J, Purohit R, Nadezhdin KD, Sobolevsky AI

EMDB-77137:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the open state
Method: single particle / : Khau J, Purohit R, Nadezhdin KD, Sobolevsky AI

EMDB-77138:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the inactivated state
Method: single particle / : Purohit R, Khau J, Nadezhdin KD, Sobolevsky AI

EMDB-77139:
Structure of human TRPV3-W692G Olmsted syndrome mutant in the open state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

EMDB-77140:
Structure of human TRPV3-W692G Olmsted syndrome mutant in the inactivated state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

EMDB-77141:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 4-fold symmetrical open state
Method: single particle / : Nadezhdin KD, Purohit R, Khau J, Sobolevsky AI

EMDB-77142:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 4-fold symmetrical inactivated state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

EMDB-77143:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 2-fold symmetrical closed state
Method: single particle / : Nadezhdin KD, Purohit R, Khau J, Sobolevsky AI

EMDB-77144:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 2-fold symmetrical open state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

EMDB-77145:
Structure of human TRPV3-W521S Olmsted syndrome mutant in the closed state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

PDB-13lj:
Structure of human TRPV3-G568C Olmsted syndrome mutant in the closed state
Method: single particle / : Khau J, Purohit R, Nadezhdin KD, Sobolevsky AI

PDB-13lk:
Structure of human TRPV3-G568C Olmsted syndrome mutant in the open state
Method: single particle / : Khau J, Purohit R, Nadezhdin KD, Sobolevsky AI

PDB-13lm:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the open state
Method: single particle / : Khau J, Purohit R, Nadezhdin KD, Sobolevsky AI

PDB-13ln:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the inactivated state
Method: single particle / : Purohit R, Khau J, Nadezhdin KD, Sobolevsky AI

PDB-13lo:
Structure of human TRPV3-W692G Olmsted syndrome mutant in the open state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

PDB-13lp:
Structure of human TRPV3-W692G Olmsted syndrome mutant in the inactivated state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

PDB-13lq:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 4-fold symmetrical open state
Method: single particle / : Nadezhdin KD, Purohit R, Khau J, Sobolevsky AI

PDB-13lr:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 4-fold symmetrical inactivated state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

PDB-13ls:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 2-fold symmetrical closed state
Method: single particle / : Nadezhdin KD, Purohit R, Khau J, Sobolevsky AI

PDB-13lt:
Structure of human TRPV3-G568D Olmsted syndrome mutant in the 2-fold symmetrical open state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

PDB-13lu:
Structure of human TRPV3-W521S Olmsted syndrome mutant in the closed state
Method: single particle / : Nadezhdin KD, Khau J, Purohit R, Sobolevsky AI

PDB-9pj5:
Closed-state structure of wild-type human TRPV3 purified in GDN detergent
Method: single particle / : Purohit R, Khau J, Nadezhdin KD, Sobolevsky AI

PDB-9pj6:
Inactivated-state structure of wild-type human TRPV3 purified in GDN detergent
Method: single particle / : Purohit R, Khau J, Nadezhdin KD, Sobolevsky AI

EMDB-72771:
Structure of the Adenovirus-7 PB-Fiber
Method: single particle / : Khayat R, Madoo K

EMDB-72772:
Structure of the Adenovirus-7 VLP, Class 4
Method: single particle / : Khayat R, Madoo K

EMDB-72773:
Structure of the Adenovirus-7 VLP, Class 3
Method: single particle / : Khayat R, Madoo K

EMDB-72774:
Structure of the Adenovirus-7 VLP, Class 2
Method: single particle / : Khayat R, Madoo K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more