[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,517 items for (author: rina & h)

EMDB-55603:
Asymmetric unit of a cytoplasmic lattice filament repeat unit
Method: subtomogram averaging / : Singh K, Harasimov K, Carter A

EMDB-55604:
Cytoplasmic lattice filament repeat unit with the central FBXW-SKP1 complex
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

EMDB-55605:
Complex linking two cytoplasmic lattice filaments
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

EMDB-55606:
Complex linking two repeat units of a cytoplasmic lattice filament
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

EMDB-55607:
Cytoplasmic lattice filament repeat unit with ubiquitin
Method: subtomogram averaging / : Singh K, Harasimov K, Carter A

EMDB-55608:
Repeat unit of cytoplasmic lattices from intact mouse embryos
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

EMDB-55609:
Composite structure of the repeat unit of cytoplasmic lattice filament
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

PDB-9t63:
Asymmetric unit of a cytoplasmic lattice filament repeat unit
Method: subtomogram averaging / : Singh K, Harasimov K, Carter A

PDB-9t64:
Cytoplasmic lattice filament repeat unit with the central FBXW-SKP1 complex
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

PDB-9t65:
Complex linking two cytoplasmic lattice filaments
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

PDB-9t66:
Complex linking two repeat units of a cytoplasmic lattice filament
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

PDB-9t67:
Cytoplasmic lattice filament repeat unit with ubiquitin
Method: subtomogram averaging / : Singh K, Harasimov K, Carter A

PDB-9t68:
Composite structure of the repeat unit of cytoplasmic lattice filament
Method: subtomogram averaging / : Singh K, Harasimov K, Carter AP

EMDB-56552:
CLASS-1_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56554:
CLASS-2_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56555:
CLASS-5_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56556:
CLASS-6_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56557:
CLASS-7_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-57250:
Cryo-EM consensus map of lm32cs1c1 m6 overexpression : class 10
Method: single particle / : Rajan KS, Yoanth A

EMDB-71555:
Cryo-EM structure of full-length human TRPV1 in complex with analgesic MSP20
Method: single particle / : Neuberger A, Talyzina IA, Romeo I, Aiello F, Maramai S, Alcaro S, Artese A, Brizzi A, Sobolevsky AI

PDB-9pea:
Cryo-EM structure of full-length human TRPV1 in complex with analgesic MSP20
Method: single particle / : Neuberger A, Talyzina IA, Romeo I, Aiello F, Maramai S, Alcaro S, Artese A, Brizzi A, Sobolevsky AI

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymj:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymk:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

PDB-9yml:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-51874:
Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)
Method: single particle / : Singh V, Shiriaev D, Khawaja A, Rorbach J

PDB-9h52:
Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)
Method: single particle / : Singh V, Shiriaev D, Khawaja A, Rorbach J

EMDB-56861:
In situ ribosome from HeLa cells
Method: subtomogram averaging / : Gemin O, Babenko A, Papp G

EMDB-77136:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the closed state
Method: single particle / : Khau J, Nadezhdin KD, Purohit R, Sobolevsky AI

PDB-13ll:
Structure of human TRPV3-Q580P Olmsted syndrome mutant in the closed state
Method: single particle / : Khau J, Nadezhdin KD, Purohit R, Sobolevsky AI

EMDB-71737:
Human 19S proteasome bound to TXNL1 PITH domain without C-terminus
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71740:
Human 26S proteasome bound to TXNL1 with opened gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71741:
Human 26S proteasome bound to TXNL1 with closed gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71791:
Human 19S proteasome regulatory particle (RP) without observing TXNL1 PITH domain bound
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71795:
Human 19S proteasome regulatory particle (RP) without observing TXNL1 PITH domain bound but with extra density adjacent to RPT1/RPT2
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71810:
Human 19S proteasome bound to TXNL1 PITH domain and PSMD5
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71813:
Human 19S proteasome bound to TXNL1 PITH domain but with low density for RPT1, RPT2, and RPN1
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-76283:
Human 19S proteasome bound to TXNL1 PITH domain state 2
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-76415:
Human 19S proteasome regulatory particle bound to TXNL1 PITH domain and p28
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-12bm:
Human 19S proteasome bound to TXNL1 PITH domain state 2
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pmj:
Human 19S proteasome bound to TXNL1 PITH domain without C-terminus
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pmo:
Human 26S proteasome bound to TXNL1 with opened gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pmq:
Human 26S proteasome bound to TXNL1 with closed gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pro:
Human 19S proteasome bound to TXNL1 PITH domain and PSMD5
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9prt:
Human 19S proteasome bound to TXNL1 PITH domain but with low density for RPT1, RPT2, and RPN1
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-54129:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

EMDB-54130:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)
Method: single particle / : Khawaja A, Singh V, Shiriaev DI, Rorbach J

EMDB-54131:
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
Method: single particle / : Singh V, Shiriaev DI, Khawaja A, Rorbach J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more