[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,936 items for (author: rina & h)

EMDB-52020:
Cryo-EM consensus map of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52021:
Cryo-EM focused refined map of the canine distemper virus dimer II region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52023:
Cryo-EM focused refined map of the canine distemper virus dimer I region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52024:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

PDB-9hbp:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-74534:
CNGA1 channel closed state in nanodisc cGMP-free
Method: single particle / : Park T, Nimigean CM

EMDB-74535:
CNGA1 channel intermediate state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-74536:
CNGA1 channel open state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-74537:
CNGA1 channel closed state in nanodisc with brain PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

EMDB-74538:
CNGA1 channel intermediate state in nanodisc with brain PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-74539:
CNGA1 channel closed state in nanodisc with diC8-PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

EMDB-74540:
CNGA1 channel intermediate state in nanodisc with diC8-PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zpv:
CNGA1 channel closed state in nanodisc cGMP-free
Method: single particle / : Park T, Nimigean CM

PDB-9zpw:
CNGA1 channel intermediate state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zpx:
CNGA1 channel open state in nanodisc cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zpy:
CNGA1 channel closed state in nanodisc with brain PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

PDB-9zpz:
CNGA1 channel intermediate state in nanodisc with brain PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

PDB-9zq0:
CNGA1 channel closed state in nanodisc with diC8-PIP2 cGMP-free
Method: single particle / : Park T, Nimigean CM

PDB-9zq1:
CNGA1 channel intermediate state in nanodisc with diC8-PIP2 cGMP-bound
Method: single particle / : Park T, Nimigean CM

EMDB-51635:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

PDB-9gvg:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

EMDB-55527:
Early Expressome Composite Map of TEC and 30S IC
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55528:
Early Expressome Consensus Refinement
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55529:
Early Expressome RNAP/TEC body
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55530:
E. coli 30S IC containing mRNA, IF1 and IF3
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55531:
E. coli 30S IC containing mRNA, initiator tRNA, IF1 and IF2
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-53240:
Connexin-32 (Cx32) gap junction channel in POPC-containing nanodiscs in the absence of CHS
Method: single particle / : Korkhov VM, Lavriha P

EMDB-53244:
Connexin-32 (Cx32) W3S mutant gap junction channel in POPC-containing MSP2N2 nanodiscs
Method: single particle / : Korkhov VM, Lavriha P, Fluri C

EMDB-53245:
Connexin-32 (Cx32) in MSP2N2 nanodiscs with POPC
Method: single particle / : Korkhov VM, Lavriha P

EMDB-53250:
Connexin-32 (Cx32) in MSP2N2 nanodiscs with liver polar lipids
Method: single particle / : Korkhov VM, Lavriha P

PDB-9qn9:
Connexin-32 (Cx32) gap junction channel in POPC-containing nanodiscs in the absence of CHS
Method: single particle / : Korkhov VM, Lavriha P

PDB-9qnd:
Connexin-32 (Cx32) W3S mutant gap junction channel in POPC-containing MSP2N2 nanodiscs
Method: single particle / : Korkhov VM, Lavriha P, Fluri C

PDB-9qnf:
Connexin-32 (Cx32) in MSP2N2 nanodiscs with POPC
Method: single particle / : Korkhov VM, Lavriha P

PDB-9qnt:
Connexin-32 (Cx32) in MSP2N2 nanodiscs with liver polar lipids
Method: single particle / : Korkhov VM, Lavriha P

EMDB-70660:
Human PORCN bound to inhibitor C59
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-70661:
Human PORCN bound to inhibitor ETC159
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-70662:
Apo Human PORCN
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo6:
Human PORCN bound to inhibitor C59
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo7:
Human PORCN bound to inhibitor ETC159
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo8:
Apo Human PORCN
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-53417:
Human UPF1 in complex with the histone stem loop RNA
Method: single particle / : Machado de Amorim A, Loll B, Hilal T, Chakrabarti S

PDB-9qwn:
Human UPF1 in complex with the histone stem loop RNA
Method: single particle / : Machado de Amorim A, Loll B, Hilal T, Chakrabarti S

EMDB-52134:
double helical p62/SQSTM1 filament
Method: helical / : Berkamp S, Jungbluth L, Katranidis A, Mostafavi S, Sachse C

PDB-9hge:
PB1 domain of p62/SQSTM1
Method: helical / : Berkamp S, Jungbluth L, Katranidis A, Mostafavi S, Sachse C

EMDB-70458:
Cryo-EM structure of human full-length XPO1 (unliganded)
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70459:
Cryo-EM structure of human full-length XPO1 conjugated with selinexor
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70460:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to yeast RAN-GTP and human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70461:
Cryo-EM structure of human exportin-1 conjugated with KPT-185 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70462:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to human ASB8(R197A)-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70463:
Cryo-EM structure of human exportin-1 conjugated with KPT-127 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more