[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,853 items for (author: qu & l)

EMDB-79039:
Australian bat lyssavirus glycoprotein PH domain in complex with broadly neutralizing human antibodies A6 and RVC20
Method: single particle / : Xu K, Xu Y

PDB-38pm:
Australian bat lyssavirus glycoprotein PH domain in complex with broadly neutralizing human antibodies A6 and RVC20
Method: single particle / : Xu K, Xu Y

PDB-32fd:
Cryo-EM structure of cariprazine-bound D3 dopamine receptor with mini-Go (alternative conformation)
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55008:
Zuzalysin bi-pentamer
Method: single particle / : Rodriguez-Banqueri A, Gomis Ruth FX, Eckhard U, Potempa J, Glatt S, Koziej L, Madej M

EMDB-55035:
Zuzalysin zymogen dodecahedral complex E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J, Gomis Ruth FX, Koziej L

PDB-9sln:
Zuzalysin bi-pentamer cryo-em
Method: single particle / : Rodriguez-Banqueri A, Gomis Ruth FX, Eckhard U, Potempa J, Glatt S, Koziej L, Madej M

PDB-9smj:
Zuzalysin zymogen dodecahedral complex E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J

EMDB-70529:
sx20S complex (NSF-alphaSNAP-syntaxin-1a), non-hydrolyzing, class 1
Method: single particle / : White KI, Brunger AT

EMDB-70536:
sx20S complex (NSF-alphaSNAP-syntaxin-1a), 4:4 alphaSNAP-syntaxin-1a subcomplex local refinement, non-hydrolyzing, class 1
Method: single particle / : White KI, Brunger AT

PDB-9oj2:
sx20S complex (NSF-alphaSNAP-syntaxin-1a), non-hydrolyzing, class 1
Method: single particle / : White KI, Brunger AT

PDB-9ojj:
sx20S complex (NSF-alphaSNAP-syntaxin-1a), 4:4 alphaSNAP-syntaxin-1a subcomplex local refinement, non-hydrolyzing, class 1
Method: single particle / : White KI, Brunger AT

EMDB-76462:
CryoEM structure of monoclonal Fab 047-09 1A02 binding the lateral patch of influenza virus H1 HA (A/California/04/2009 H1N1)
Method: single particle / : Fernandez-Quintero ML, Han J, Ward AB

PDB-12iv:
CryoEM structure of monoclonal Fab 047-09 1A02 binding the lateral patch of influenza virus H1 HA (A/California/04/2009 H1N1)
Method: single particle / : Fernandez-Quintero ML, Han J, Ward AB

EMDB-56669:
Human PRC1.4 in complex with native UBCH5C bound to a H3Kc27me3 mononucleosome
Method: single particle / : Ciapponi M, Mueller J

EMDB-56717:
Human PRC1.4 bound to a H3Kc27me3 mononucleosome
Method: single particle / : Ciapponi M, Mueller J

PDB-28oe:
Human PRC1.4 in complex with native UBCH5C bound to a H3Kc27me3 mononucleosome
Method: single particle / : Ciapponi M, Mueller J

EMDB-55005:
Zuzalysin pentamer cryo-em
Method: single particle / : Rodriguez-Banqueri A, Gomis Ruth FX, Eckhard U, Potempa J, Glatt S, Koziej L, Madej M

EMDB-55026:
Zuzalysin active dodecahedral complex
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Koziej L, Glatt S, Potempa J, Gomis Ruth FX

EMDB-55028:
Zuzalysin zymogen pentamer E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J, Gomis Ruth FX, Koziej L

PDB-9sll:
Zuzalysin active pentamer
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Koziej L, Glatt S, Potempa J, Gomis Ruth FX

PDB-9sm4:
Zuzalysin active dodecahedral complex
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Koziej L, Glatt S, Potempa J, Gomis Ruth FX

PDB-9sm8:
Zuzalysin zymogen pentamer E439A
Method: single particle / : Rodriguez-Banqueri A, Madej M, Eckhard U, Potempa J, Gomis Ruth FX

EMDB-68583:
Cryo EM structure of SARS-COV-2 (BA.4) RBD in complex with THZ937 Fab (local refine)
Method: single particle / : Wang X, Guo F

PDB-22pd:
Cryo EM structure of SARS-COV-2 (BA.4) RBD in complex with THZ937 Fab (local refine)
Method: single particle / : Wang X, Guo F

EMDB-55684:
Cryo-EM structure of cariprazine-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

PDB-9t8c:
Cryo-EM structure of cariprazine-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-66823:
Cryo-EM structure of the Bavachalcone bound FFAR4-Giq complex
Method: single particle / : Zhu S, Wang Z

EMDB-66824:
Cryo-EM structure of the Bavachalcone bound GPR120-Giq complex (local refinement)
Method: single particle / : Zhu S, Wang Z

PDB-9xfi:
Cryo-EM structure of the Bavachalcone bound FFAR4-Giq complex
Method: single particle / : Zhu S, Wang Z

PDB-9xfj:
Cryo-EM structure of the Bavachalcone bound GPR120-Giq complex (local refinement)
Method: single particle / : Zhu S, Wang Z

EMDB-76461:
CryoEM structure of monoclonal Fab 047-09M 2F03 binding the lateral patch of influenza virus H1 HA (A/California/04/2009)
Method: single particle / : Swanson OM, Fernandez-Quintero ML, Han J, Ward AB

PDB-12iu:
CryoEM structure of monoclonal Fab 047-09M 2F03 binding the lateral patch of influenza virus H1 HA (A/California/04/2009)
Method: single particle / : Swanson OM, Fernandez-Quintero ML, Han J, Ward AB

EMDB-55650:
Cryo-EM structure of ESG-2-36-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55651:
Cryo-EM structure of EA-Ri-112-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55683:
Cryo-EM structure of ESG-2-37-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

EMDB-55685:
Cryo-EM structure of EA-RK-110-bound D3 dopamine receptor
Method: single particle / : Yardeni EH, Kiss DJ, Shavit K, Keseru GM, Shalev-Benami M

PDB-9t7p:
Cryo-EM structure of ESG-2-36-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

PDB-9t7q:
Cryo-EM structure of EA-Ri-112-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

PDB-9t88:
Cryo-EM structure of ESG-2-37-bound D3 dopamine receptor with mini-Go
Method: single particle / : Yardeni EH, Kiss DJ, Keseru GM, Shalev-Benami M

PDB-9t8d:
Cryo-EM structure of EA-RK-110-bound D3 dopamine receptor
Method: single particle / : Yardeni EH, Kiss DJ, Shavit K, Keseru GM, Shalev-Benami M

EMDB-56520:
Cryo-EM map of SKM-70S complex State 2 (Accommodating A-tRNA)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-56525:
Cryo-EM map of SKM-70S complex State 4 (Accommodated A-tRNA)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-56530:
Cryo-EM map of SKM-70S complex State 6 (Empty, canonical)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-57122:
Cryo-EM map of SKM-70S complex State 7 (Empty, rotated)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-66010:
Cryo-EM structure of VGLUT3 in apo state
Method: single particle / : Qu QH, Chao YL, Yang CH, Wang X, Zhou ZX

PDB-9wix:
Cryo-EM structure of VGLUT3 in apo state
Method: single particle / : Qu QH, Chao YL, Yang CH, Wang X, Zhou ZX

EMDB-78482:
RomA Bound to H3K14Nle Nucleosome
Method: single particle / : Miller S, Worden EJ

EMDB-53206:
GABA-A receptor a3b3g2 + a3NB83(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53207:
GABA-A receptor a3b3 (1:4) + a3NB77(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53208:
GABA-A receptor a2b3 (1:4) + a2NB29(near-silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more