[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 394 items for (author: lum & a)

EMDB-41072:
Human leukocyte antigen bound by two alloreactive antibody Fabs
Method: single particle / : Kizziah JL, Killian JT, Diaz-Avalos R, Qiu S, Yang G, Green T, Lund FE

EMDB-36571:
Cryo EM map of full length PLC gamma 2
Method: single particle / : Shin YC, Liao M

EMDB-36572:
Cryo EM map of full length PLC gamma 2 in autoinhibition state
Method: single particle / : Shin YC, Liao M

EMDB-36573:
Cryo EM map of full length PLC gamma 2 and FGFR1 Kinase Domain
Method: single particle / : Shin YC, Liao M

PDB-8jqg:
Cryo EM map of full length PLC gamma 2
Method: single particle / : Shin YC, Liao M

PDB-8jqh:
Cryo EM map of full length PLC gamma 2 in autoinhibition state
Method: single particle / : Shin YC, Liao M

PDB-8jqi:
Cryo EM map of full length PLC gamma 2 and FGFR1 Kinase Domain
Method: single particle / : Shin YC, Liao M

EMDB-45175:
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9c44:
SARS-CoV-2 S + S2L20
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9c45:
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-44103:
Structure of the Porcine deltacoronavirus (PDCoV) receptor-binding domain bound to the PD33 antibody Fab fragment and the Kappa light chain nanobody
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-46805:
PDCoV S RBD bound to PD41 Fab (local refinement)
Method: single particle / : Asarnow D, Rexhepaj M, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9b2c:
Structure of the Porcine deltacoronavirus (PDCoV) receptor-binding domain bound to the PD33 antibody Fab fragment and the Kappa light chain nanobody
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9df0:
PDCoV S RBD bound to PD41 Fab (local refinement)
Method: single particle / : Asarnow D, Rexhepaj M, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-43438:
Structure of the voltage-gated sodium channel NavPas from American Cockroach Periplaneta Americana in complex with scorpion alpha-toxin LqhaIT
Method: single particle / : Phulera S, Khoshouei M, Whicher J, Weihofen WA

PDB-8vqc:
Structure of the voltage-gated sodium channel NavPas from American Cockroach Periplaneta Americana in complex with scorpion alpha-toxin LqhaIT
Method: single particle / : Phulera S, Khoshouei M, Whicher J, Weihofen WA

EMDB-42603:
Human p97/VCP structure with a triazole inhibitor (NSC799462/hexamer)
Method: single particle / : Nandi P, DeVore K, Chiu PL

EMDB-42625:
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC804515)
Method: single particle / : Nandi P, DeVore K, Chiu PL

EMDB-42626:
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/up)
Method: single particle / : Nandi P, DeVore K, Chiu PL

EMDB-42627:
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/down)
Method: single particle / : Nandi P, DeVore K, Chiu PL

EMDB-44748:
Human p97/VCP structure with a triazole inhibitor (NSC799462/dodecamer)
Method: single particle / : Nandi P, DeVore K, Chiu PL

PDB-8uv2:
Human p97/VCP structure with a triazole inhibitor (NSC799462/hexamer)
Method: single particle / : Nandi P, DeVore K, Chiu PL

PDB-8uvo:
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC804515)
Method: single particle / : Nandi P, DeVore K, Chiu PL

PDB-8uvp:
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/up)
Method: single particle / : Nandi P, DeVore K, Chiu PL

PDB-8uvq:
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/down)
Method: single particle / : Nandi P, DeVore K, Chiu PL

PDB-9boq:
Human p97/VCP structure with a triazole inhibitor (NSC799462/dodecamer)
Method: single particle / : Nandi P, DeVore K, Chiu PL

EMDB-36083:
Cryo-EM structure of DDM1-nucleosome complex
Method: single particle / : Osakabe A, Takizawa Y, Horikoshi N, Hatazawa S, Berger F, Kurumizaka H, Kakutani T

EMDB-36084:
Cryo-EM structure of nucleosome containing Arabidopsis thaliana histones
Method: single particle / : Osakabe A, Takizawa Y, Horikoshi N, Hatazawa S, Berger F, Kurumizaka H, Kakutani T

EMDB-36085:
Cryo-EM structure of nucleosome containing Arabidopsis thaliana H2A.W
Method: single particle / : Osakabe A, Takizawa Y, Horikoshi N, Hatazawa S, Berger F, Kurumizaka H, Kakutani T

PDB-8j90:
Cryo-EM structure of DDM1-nucleosome complex
Method: single particle / : Osakabe A, Takizawa Y, Horikoshi N, Hatazawa S, Berger F, Kurumizaka H, Kakutani T

PDB-8j91:
Cryo-EM structure of nucleosome containing Arabidopsis thaliana histones
Method: single particle / : Osakabe A, Takizawa Y, Horikoshi N, Hatazawa S, Berger F, Kurumizaka H, Kakutani T

PDB-8j92:
Cryo-EM structure of nucleosome containing Arabidopsis thaliana H2A.W
Method: single particle / : Osakabe A, Takizawa Y, Horikoshi N, Hatazawa S, Berger F, Kurumizaka H, Kakutani T

EMDB-18540:
human connexin-36 gap junction channel in complex with mefloquine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

EMDB-18987:
human connexin-36 gap junction channel
Method: single particle / : Ding XY, Blum TB, Korkhov VM

EMDB-18988:
human connexin-36 gap junction channel in complex with quinine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

PDB-8qoj:
human connexin-36 gap junction channel in complex with mefloquine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

PDB-8r7p:
human connexin-36 gap junction channel
Method: single particle / : Ding XY, Blum TB, Korkhov VM

PDB-8r7q:
human connexin-36 gap junction channel in complex with quinine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

EMDB-19163:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19164:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19165:
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19166:
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rgz:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more