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Showing all 43 items for (author: kojima & s)

EMDB-62028:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

PDB-9k3t:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

EMDB-39003:
TUG-1375 and 4-CMTB-bound human FFA2 in complex with Gi
Method: single particle / : Kugawa M, Kawakami K, Kise R, Kobayashi K, Kojima A, Inoue W, Fukuda M, Inoue A, Kato HE

EMDB-39004:
GLPG0974-bound human FFA2
Method: single particle / : Kugawa M, Kawakami K, Kise R, Kobayashi K, Kojima A, Inoue W, Fukuda M, Inoue A, Kato HE

PDB-8y6w:
TUG-1375 and 4-CMTB-bound human FFA2 in complex with Gi
Method: single particle / : Kugawa M, Kawakami K, Kise R, Kobayashi K, Kojima A, Inoue W, Fukuda M, Inoue A, Kato HE

PDB-8y6y:
GLPG0974-bound human FFA2
Method: single particle / : Kugawa M, Kawakami K, Kise R, Kobayashi K, Kojima A, Inoue W, Fukuda M, Inoue A, Kato HE

EMDB-39835:
Photosynthetic LH2-LH1 complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Nagashima KVP, Kanno R, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

PDB-8z81:
Photosynthetic LH2-LH1 complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Nagashima KVP, Kanno R, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

EMDB-36627:
Cryo-EM structure of the anamorelin-bound ghrelin receptor and Gq complex
Method: single particle / : Im D, Shiimura Y, Asada H, Iwata S

PDB-8jsr:
Cryo-EM structure of the anamorelin-bound ghrelin receptor and Gq complex
Method: single particle / : Im D, Shiimura Y, Asada H, Iwata S

EMDB-60580:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM NaCl
Method: single particle / : Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K

EMDB-60581:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM KCl
Method: single particle / : Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K

EMDB-60584:
Bacterial flagellar sodium-driven stator PomA5PomB2(D24N) with 100 mM NaCl
Method: single particle / : Nishikino T, Kishikiwa J, Hirose M, Kato T, Imada K

EMDB-60585:
Bacterial flagellar sodium-driven stator PomA5PomB2(D24N) with 100 mM KCl
Method: single particle / : Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K

EMDB-60636:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM NaCl and 0.1 mM phenamil
Method: single particle / : Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K

PDB-8zyv:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM NaCl
Method: single particle / : Nishikino T, Takekawa N, Imada K

PDB-8zyw:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM KCl
Method: single particle / : Nishikino T, Takekawa N, Imada K

PDB-8zyz:
Bacterial flagellar sodium-driven stator PomA5PomB2(D24N) with 100 mM NaCl
Method: single particle / : Nishikino T, Takekawa N, Imada K

PDB-8zz0:
Bacterial flagellar sodium-driven stator PomA5PomB2(D24N) with 100 mM KCl
Method: single particle / : Nishikino T, Takekawa N, Imada K

PDB-9ijm:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM NaCl and 0.1 mM phenamil
Method: single particle / : Nishikino T, Takekawa N, Imada K

EMDB-39761:
Structure of the S-ring region of the Vibrio flagellar MS-ring protein FliF with 34-fold symmetry applied
Method: single particle / : Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K, Homma M

EMDB-39763:
Structure of the S-ring region of the Vibrio flagellar MS-ring protein FliF with 35-fold symmetry applied
Method: single particle / : Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K, Homma M

EMDB-39764:
Homomeric 34mer of the Vibrio flagellar MS-ring protein FliF without symmetry imposition
Method: single particle / : Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K, Homma M

EMDB-39765:
Homomeric 35mer of the Vibrio flagellar MS-ring protein FliF without symmetry imposition
Method: single particle / : Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K, Homma M

PDB-8z4d:
Structure of the S-ring region of the Vibrio flagellar MS-ring protein FliF with 34-fold symmetry applied
Method: single particle / : Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K, Homma M

PDB-8z4g:
Structure of the S-ring region of the Vibrio flagellar MS-ring protein FliF with 35-fold symmetry applied
Method: single particle / : Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kato T, Imada K, Homma M

EMDB-38453:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein in complex with ACE2 (1-up state)
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

EMDB-38454:
Structure of the SARS-CoV-2 EG.5.1 spike RBD in complex with ACE2
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

PDB-8xlm:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein in complex with ACE2 (1-up state)
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

PDB-8xln:
Structure of the SARS-CoV-2 EG.5.1 spike RBD in complex with ACE2
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

EMDB-37648:
SARS-CoV-2 EG.5.1 spike glycoprotein (1-up state)
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

EMDB-37650:
SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

EMDB-37651:
SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

PDB-8wmd:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

PDB-8wmf:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)
Method: single particle / : Nomai T, Anraku Y, Kita S, Hashiguchi T, Maenaka K

EMDB-34203:
CryoEM structure of pentameric MotA from Aquifex aeolicus
Method: single particle / : Nishikino T, Takekawa N, Kishikawa J, Hirose M, Onoe S, Kato T, Imada K

PDB-8gqy:
CryoEM structure of pentameric MotA from Aquifex aeolicus
Method: single particle / : Nishikino T, Takekawa N, Kishikawa J, Hirose M, Onoe S, Kato T, Imada K

EMDB-30378:
Salmonella FliF-FliG ring complex
Method: single particle / : Kawamoto A, Kato T, Kinoshita M, Minamino T, Namba K

EMDB-30379:
11-fold symmetry of Salmonella FliF-FliG ring complex
Method: single particle / : Kawamoto A, Kato T, Kinoshita M, Minamino T, Namba K

EMDB-21027:
Vibrio flagellar motor structure
Method: subtomogram averaging / : Zhu S, Nishikino T, Takekawa N, Terashima H, Kojima S, Imada K, Homma M, Liu J

EMDB-21819:
Vibrio alginolyticus counterclockwise biased mutant
Method: electron tomography / : Liu J, Carroll BL

EMDB-21837:
Vibrio alginolyticus Clockwise Locked Rotor
Method: electron tomography / : Liu J, Carroll BL

EMDB-3417:
Structure of tetrameric MotA complex
Method: single particle / : Takekawa N, Terahara N, Kato T, Gohara M, Mayanagi K, Hijikata A, Onoue Y, Kojima S, Shirai T, Namba K, Homma M

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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