[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 464 items for (author: kater & l)

EMDB-48699:
Consensus reconstitution of SLC33A1 in complex with a Fv clasp
Method: single particle / : Gad M, Hite RK

EMDB-56352:
Structure of the Chlamydomonas reinhardtii chlororibosome
Method: single particle / : Waltz F, Kater L, Engel BD

PDB-9tvu:
Structure of the Chlamydomonas reinhardtii chlororibosome
Method: single particle / : Waltz F, Kater L, Engel BD

EMDB-56139:
Subtomogram average of the Chlamydomonas reinhardtii chlororibosome - consensus map
Method: subtomogram averaging / : Waltz F, Engel BD

EMDB-56140:
Subtomogram average of the Chlamydomonas reinhardtii chlororibosome - LSU focused
Method: subtomogram averaging / : Waltz F, Engel BD

EMDB-56141:
Subtomogram average of the Chlamydomonas reinhardtii chlororibosome - SSU focused
Method: subtomogram averaging / : Waltz F, Engel BD

EMDB-56142:
Subtomogram average of the Chlamydomonas reinhardtii chlororibosome - SSU extension focused
Method: subtomogram averaging / : Waltz F, Engel BD

EMDB-56143:
Subtomogram average of the Chlamydomonas reinhardtii chlororibosome - chimeric map
Method: subtomogram averaging / : Waltz F, Engel BD

EMDB-56144:
Subtomogram average of the membrane-bound Chlamydomonas reinhardtii chlororibosome
Method: subtomogram averaging / : Waltz F, Engel BD

EMDB-56337:
Structure of the Chlamydomonas reinhardtii chlororibosome - consensus map
Method: single particle / : Waltz F, Engel BD

EMDB-56338:
Structure of the Chlamydomonas reinhardtii chlororibosome - LSU focus
Method: single particle / : Waltz F, Engel BD

EMDB-56339:
Structure of the Chlamydomonas reinhardtii chlororibosome - LSU CP focus
Method: single particle / : Waltz F, Engel BD

EMDB-56340:
Structure of the Chlamydomonas reinhardtii chlororibosome - LSU L7/12 stalk focus
Method: single particle / : Waltz F, Engel BD

EMDB-56341:
Structure of the Chlamydomonas reinhardtii chlororibosome - SSU body focus
Method: single particle / : Waltz F, Engel BD

EMDB-56342:
Structure of the Chlamydomonas reinhardtii chlororibosome - SSU head focus
Method: single particle / : Waltz F, Engel BD

EMDB-56344:
Structure of the Chlamydomonas reinhardtii chlororibosome - SSU head extension recenter and focus
Method: single particle / : Waltz F, Engel BD

EMDB-56349:
Structure of the Chlamydomonas reinhardtii chlororibosome - SSU extension focus
Method: single particle / : Waltz F, Engel BD

EMDB-56560:
Structure of the Chlamydomonas reinhardtii chlororibosome with pY factor - consensus map
Method: single particle / : Waltz F, Engel BD

EMDB-56561:
Structure of the Chlamydomonas reinhardtii chlororibosome with P-site tRNA - consensus map
Method: single particle / : Waltz F, Engel BD

EMDB-56562:
Structure of the Chlamydomonas reinhardtii chlororibosome with P-site tRNA - LSU focus
Method: single particle / : Waltz F, Engel BD

EMDB-56563:
Structure of the Chlamydomonas reinhardtii chlororibosome with pY factor - LSU focus
Method: single particle / : Waltz F, Engel BD

EMDB-56564:
Structure of the Chlamydomonas reinhardtii chlororibosome with pY factor - focus SSU
Method: single particle / : Waltz F, Engel BD

EMDB-56565:
Structure of the Chlamydomonas reinhardtii chlororibosome with P-site tRNA - focus SSU
Method: single particle / : Waltz F, Engel BD

EMDB-54078:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 2
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54157:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 2 (Consensus map)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54158:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 2 (Focused refinement of BAF part)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

PDB-9rn2:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 2
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54156:
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2 (Focused refinement of BAF)
Method: single particle / : Domjan D, Weiss J, Cavadini S, Vecchia L, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54056:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 1
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

PDB-9rmc:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 1
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54155:
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2 (Consensus map)
Method: single particle / : Domjan D, Weiss J, Cavadini S, Vecchia L, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54030:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54143:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 (Focus refinement of ARP module)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54144:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 (ATPase part)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54145:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 (Focus refinement of BAF BASE+ARM+HEAD)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54146:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 (Focus refinement of nucleosome part)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54152:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 (Focus refinement of nucleosome+OCT4/SOX2 part)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54153:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 (Consensus map)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54159:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 (Focused refinement of nucleosome+OCT4/SOX2 part)
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare GR, Thoma NH

PDB-9rl4:
Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6
Method: single particle / : Vecchia L, Weiss J, Cavadini S, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-54154:
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2 (Focused refinement of nucleosome and ATPase lobes)
Method: single particle / : Domjan D, Weiss J, Cavadini S, Vecchia L, Kempf G, Kater L, Pathare GR, Thoma NH

EMDB-54077:
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2
Method: single particle / : Domjan D, Weiss J, Cavadini S, Veccia L, Kempf G, Kater L, Pathare G, Thoma NH

PDB-9rn1:
Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2
Method: single particle / : Domjan D, Weiss J, Cavadini S, Veccia L, Kempf G, Kater L, Pathare G, Thoma NH

EMDB-72979:
Cryo-EM structure of yeast Mgm101 bound to 83-mer ssDNA
Method: single particle / : Wheat CT, Bell CE

EMDB-72980:
Cryo-EM structure of yeast Mgm101 bound to duplex DNA annealing intermediate
Method: single particle / : Wheat CT, Bell CE

EMDB-72981:
Cryo-EM structure of yeast Mgm101 bound to apparent B-form DNA
Method: single particle / : Wheat CT, Bell CE

EMDB-72983:
Cryo-EM structure of yeast Mgm101 in the lock-washer apo state
Method: single particle / : Wheat CT, Bell CE

EMDB-72984:
Cryo-EM structure of yeast Mgm101 in the ring apo state
Method: single particle / : Wheat CT, Bell CE

PDB-9yi6:
Cryo-EM structure of yeast Mgm101 bound to 83-mer ssDNA
Method: single particle / : Wheat CT, Bell CE

PDB-9yi7:
Cryo-EM structure of yeast Mgm101 bound to duplex DNA annealing intermediate
Method: single particle / : Wheat CT, Bell CE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more