[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,636 items for (author: ho & kl)


EMDB entry, No image

EMDB-44552:
Septin Hexameric Complex SEPT2/SEPT6/SEPT7 of Ciona intestinalis by Cryo-EM
Method: single particle / : Mendonca DC, Pereira HM, Garratt RC


EMDB entry, No image

EMDB-44555:
Septin Tetrameric Complex SEPT7/SEPT9 of Ciona intestinalis by Cryo-EM
Method: single particle / : Mendonca DC, Pereira HM, Garratt RC

EMDB-18881:
AL amyloid fibril from the FOR010 light chain
Method: helical / : Pfeiffer PB, Banerjee S, Schmidt M, Faendrich M

EMDB-19818:
AL amyloid fibril from the FOR103 light chain
Method: helical / : Pfeiffer PB, Karimi-Farsijani S, Kupfer N, Schmidt M, Faendrich M

EMDB-41874:
CryoEM structure of A/Solomon Islands/3/2006 H1 HA in complex with 05.GC.w2.3C10-H1_SI06
Method: single particle / : Moore N, Han J, Ward AB, Wilson IA

EMDB-43712:
Human EBP complexed with compound 1
Method: single particle / : Sun D, Masureel M

EMDB-43713:
Human EBP complexed with compound 3a
Method: single particle / : Sun D, Masureel M

PDB-8w0r:
Human EBP complexed with compound 1
Method: single particle / : Sun D, Masureel M

PDB-8w0s:
Human EBP complexed with compound 3a
Method: single particle / : Sun D, Masureel M

EMDB-42074:
Representative tomogram of Enterococcus faecium WT Com15
Method: electron tomography / : Hang HC, Park D

EMDB-42086:
Representative tomogram of Enterococcus faecium SagA complementation strain
Method: electron tomography / : Hang HC, Park D

EMDB-42087:
Representative tomogram of Enterococcus faecium SagA deletion strain
Method: electron tomography / : Hang HC, Park D

EMDB-18539:
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18812:
The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA - Focused refinement of the of the 60S subunit
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18813:
The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA - Focused refinement of the of the 40S subunit body
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18814:
The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA - Focused refinement of the of the 40S subunit head
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-18815:
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA - Global human 80S ribosome refinement before focused refinements.
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

PDB-8qoi:
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA
Method: single particle / : Holvec S, Barchet C, Frechin L, Hazemann I, von Loeffelholz O, Klaholz BP

EMDB-17197:
Human TPC2 in Complex with Antagonist (S)-SG-094
Method: single particle / : Chi G, Pike ACW, Maclean EM, Li H, Mukhopadhyay SMM, Bohstedt T, Wang D, McKinley G, Fernandez-Cid A, Duerr K

EMDB-19108:
Human TPC2 in Complex withAntagonist (R)-SG-094
Method: single particle / : Chi G, Pike ACW, Maclean EM, Li H, Mukhopadhyay SMM, Bohstedt T, Wang D, McKinley G, Fernandez-Cid A, Duerr K

EMDB-43161:
Human transthyretin covalently modified with A2-derived stilbene in the canonical conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

EMDB-43162:
Unliganded human transthyretin in the canonical conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

EMDB-43163:
Unliganded human transthyretin in the compressed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

EMDB-43164:
Unliganded human transthyretin in the frayed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

EMDB-43165:
(Biarylamine-FT2-WT)1(C10A)3-human transthyretin in the compressed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

EMDB-43166:
(Biarylamine-FT2-WT)1(C10A)3-human transthyretin in the frayed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

PDB-8ve1:
Human transthyretin covalently modified with A2-derived stilbene in the canonical conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

PDB-8ve2:
Unliganded human transthyretin in the canonical conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

PDB-8ve3:
Unliganded human transthyretin in the compressed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

PDB-8ve4:
Unliganded human transthyretin in the frayed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

PDB-8ve5:
(Biarylamine-FT2-WT)1(C10A)3-human transthyretin in the compressed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

PDB-8ve6:
(Biarylamine-FT2-WT)1(C10A)3-human transthyretin in the frayed conformation
Method: single particle / : Basanta B, Nugroho K, Yan N, Kline GM, Tsai FJ, Wu M, Kelly JW, Lander GC

EMDB-40261:
DDB1/CRBN in complex with ARV-471 and the ER ligand-binding domain
Method: single particle / : Digianantonio K, Drulyte I, Gough S, Bekes M, Taylor I

EMDB-19426:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19427:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19428:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19429:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpy:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpz:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq0:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq2:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-18658:
Structure of the NCOA4 (Nuclear Receptor Coactivator 4)-FTH1 (H-Ferritin) complex
Method: single particle / : Hoelzgen F, Klukin E, Zalk R, Shahar A, Cohen-Schwartz S, Frank GA

PDB-8qu9:
Structure of the NCOA4 (Nuclear Receptor Coactivator 4)-FTH1 (H-Ferritin) complex
Method: single particle / : Hoelzgen F, Klukin E, Zalk R, Shahar A, Cohen-Schwartz S, Frank GA

EMDB-19798:
human PLD3 homodimer structure
Method: single particle / : Lammens K

PDB-8s86:
human PLD3 homodimer structure
Method: single particle / : Lammens K

EMDB-18639:
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)
Method: single particle / : Ren J, Stuart DI, Duyvesteyn HME

EMDB-18649:
Local refinement of SARS-CoV-2 BA.2.86 Spike and XBB-7 Fab
Method: single particle / : Ren J, Duyvesteyn HME, Stuart DI

EMDB-19002:
XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
Method: single particle / : Duyvesteyn HME, Ren J, Stuart DI

PDB-8qsq:
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)
Method: single particle / : Ren J, Stuart DI, Duyvesteyn HME

PDB-8qtd:
Local refinement of SARS-CoV-2 BA.2.86 Spike and XBB-7 Fab
Method: single particle / : Ren J, Duyvesteyn HME, Stuart DI

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more