[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 71 items for (author: bange & g)

EMDB-54448:
Cryo-EM structure of activated retron Eco2 (Ec67)
Method: single particle / : Skorupskaite A, Jasnauskaite M, Grigaitis R, Malinauskaite L, Pausch P

EMDB-52583:
Cryo-EM structure of retron Eco2 (Ec67)
Method: single particle / : Jasnauskaite M, Miksys A, Skorupskaite A, Malinauskaite L, Pausch P

EMDB-52584:
Cryo-EM structure of retron Eco2 (Ec67) in presence of Mg ions
Method: single particle / : Skorupskaite A, Jasnauskaite M, Malinauskaite L, Pausch P

PDB-9i2f:
Cryo-EM structure of retron Eco2 (Ec67)
Method: single particle / : Jasnauskaite M, Miksys A, Skorupskaite A, Malinauskaite L, Pausch P

PDB-9i2g:
Cryo-EM structure of retron Eco2 (Ec67) in presence of Mg ions
Method: single particle / : Skorupskaite A, Jasnauskaite M, Malinauskaite L, Pausch P

EMDB-51023:
Structure of the minimal type I-F2 CRISPR-Cas DNA-interference complex.
Method: single particle / : Mais CN, Perry TN, Sanchez-Londono M, Steinchen W, Innis CA, Randau L, Paush P, Bange G

PDB-9g44:
Structure of the minimal type I-F2 CRISPR-Cas DNA-interference complex.
Method: single particle / : Mais CN, Perry TN, Sanchez-Londono M, Steinchen W, Innis CA, Randau L, Paush P, Bange G

EMDB-51819:
Cryo-EM structure of YhaM
Method: single particle / : Pane-Farre J, Madej MG, Fu L, Ziegler C, Hinrichs R

PDB-9h3f:
Cryo-EM structure of YhaM
Method: single particle / : Pane-Farre J, Madej MG, Fu L, Ziegler C, Hinrichs R

EMDB-50201:
Human condensin II - M18BP1 complex
Method: single particle / : Borsellini A, Vannini A

PDB-9f5w:
Human condensin II - M18BP1 complex
Method: single particle / : Borsellini A, Vannini A

EMDB-51946:
Cryo-EM structure of the Vibrio natrigens 30S ribosomal subunit in complex with spectinomycin.
Method: single particle / : Raulf KF, Koller TO, Beckert B, Morici M, Lepak A, Bange G, Wilson DN

EMDB-51947:
Cryo-EM structure of the Vibrio natrigens 50S ribosomal subunit in complex with the proline-rich antimicrobial peptide Bac5(1-17).
Method: single particle / : Raulf KF, Koller TO, Beckert B, Morici M, Lepak A, Bange G, Wilson DN

PDB-9h90:
Cryo-EM structure of the Vibrio natrigens 30S ribosomal subunit in complex with spectinomycin.
Method: single particle / : Raulf KF, Koller TO, Beckert B, Morici M, Lepak A, Bange G, Wilson DN

PDB-9h91:
Cryo-EM structure of the Vibrio natrigens 50S ribosomal subunit in complex with the proline-rich antimicrobial peptide Bac5(1-17).
Method: single particle / : Raulf KF, Koller TO, Beckert B, Morici M, Lepak A, Bange G, Wilson DN

EMDB-51116:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

EMDB-51121:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

PDB-9g79:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

PDB-9g7f:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

EMDB-18779:
Structure of the non-mitochondrial citrate synthase from Ananas comosus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8qzp:
Structure of the non-mitochondrial citrate synthase from Ananas comosus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-19042:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19043:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (13pf) protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19044:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (14pf) protofilament
Method: single particle / : Bangera M, Moores CA

PDB-8rc1:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-16004:
Structure of hexameric subcomplexes (Truncation Delta2-6) of the fractal citrate synthase from Synechococcus elongatus PCC7942
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-19250:
Pseudoatomic model of a second-order Sierpinski triangle formed by the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-19251:
Structure of a first order Sierpinski triangle formed by the H369R mutant of the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8bei:
Structure of hexameric subcomplexes (Truncation Delta2-6) of the fractal citrate synthase from Synechococcus elongatus PCC7942
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8rjk:
Pseudoatomic model of a second-order Sierpinski triangle formed by the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8rjl:
Structure of a first order Sierpinski triangle formed by the H369R mutant of the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-15529:
Structure of a first level Sierpinski triangle formed by a citrate synthase
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8an1:
Structure of a first level Sierpinski triangle formed by a citrate synthase
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-34836:
Complex of GMPCPP microtubule, FAP20 and tubulin (in absence of GTP)
Method: single particle / : Bangera M, Sirajuddin M

EMDB-15052:
CryoEM structure of DHS-eIF5A1 complex
Method: single particle / : Wator E, Wilk P, Biela AP, Rawski M, Grudnik P

PDB-8a0e:
CryoEM structure of DHS-eIF5A1 complex
Method: single particle / : Wator E, Wilk P, Biela AP, Rawski M, Grudnik P

EMDB-12676:
Vibrio vulnificus stressosome
Method: single particle / : Kaltwasser S, Heinz V

EMDB-12734:
Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
Method: single particle / : Kratzat H, Czech L

EMDB-12735:
Cryo-EM map of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with GMPPNP-SRP bound
Method: single particle / : Kratzat H, Berninghausen O, Beckmann R

EMDB-13839:
Cryo-EM structure of an Escherichia coli TnaC-stalled FtsQ ribosome-nascent chain complex with GMPPNP-SRP bound
Method: single particle / : Esser HF, Kratzat H, Musial J, Berninghausen O, Beckmann R

EMDB-13840:
Cryo-EM structure of an Escherichia coli TnaC-stalled FtsQ ribosome-nascent chain complex with (p)ppGpp-SRP bound
Method: single particle / : Esser HF, Kratzat H, Musial J, Berninghausen O, Beckmann R

PDB-7o5b:
Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
Method: single particle / : Kratzat H, Czech L, Berninghausen O, Bange G, Beckmann R

EMDB-32033:
14pf microtubule decorated with EML1-GFP
Method: helical / : Bangera M, Sirajuddin M

EMDB-12878:
RNA-free Ribonuclease P from Halorhodospira halophila
Method: single particle / : Altegoer F, Bange G

PDB-7og5:
RNA-free Ribonuclease P from Halorhodospira halophila
Method: single particle / : Altegoer F, Bange G

EMDB-11774:
Cryo-EM structure of the signal sequence-engaged post-translational Sec translocon
Method: single particle / : Weng TH, Beatrix B

EMDB-11775:
Cryo-EM structure of the apo state post-translational Sec translocon
Method: single particle / : Weng TH, Beatrix B, Berninghausen O, Becker T, Cheng J, Beckmann R

PDB-7aft:
Cryo-EM structure of the signal sequence-engaged post-translational Sec translocon
Method: single particle / : Weng TH, Beatrix B, Berninghausen O, Becker T, Cheng J, Beckmann R

EMDB-11059:
ATP-dependent partner switch links flagellar C-ring assembly with gene expression
Method: subtomogram averaging / : Blagotinsek V, Schwan M, Steinchen W, Mrusek D, Hook J, Rossmann FM, Freibert SA, Kressler D, Beeby M, Thormann KM, Bange G

EMDB-11060:
Flagellar motor of Shewanella putrefaciens in situ, flhG deletion
Method: subtomogram averaging / : Blagotinsek V, Schwan M, Steinchen W, Mrusek D, Hook J, Rossmann FM, Freibert SA, Kressler D, Beeby M, Thormann KM, Bange G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more