[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 861 items for (author: arya & c)

EMDB-56552:
CLASS-1_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56554:
CLASS-2_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56555:
CLASS-5_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56556:
CLASS-6_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56557:
CLASS-7_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-57250:
Cryo-EM consensus map of lm32cs1c1 m6 overexpression : class 10
Method: single particle / : Rajan KS, Yoanth A

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-47533:
cryo-EM structure of CH31 IgM BCR lacking view of Fab region
Method: single particle / : Thakur B, Acharya P

EMDB-47534:
cryo-EM map of CH31 IgM BCR receptor representing immunoglobulin ectodomain, population-1
Method: single particle / : Thakur B, Acharya P

EMDB-47535:
cryo-EM map of CH31 IgM BCR receptor representing immunoglobulin ectodomain, population 2
Method: single particle / : Thakur B, Acharya P

EMDB-47536:
Cryo-EM map of CH31 IgM BCR receptor representing immunoglobulin ectodomain, population 3
Method: single particle / : Thakur B, Acharya P

EMDB-47537:
Cryo-EM map of 2G12 IgG BCR lacking Fab region view
Method: single particle / : Thakur B, Acharya P

EMDB-47544:
Cryo-EM map of 2G12 IgG BCR ectodomain, Population 1
Method: single particle / : Thakur B, Acharya P

EMDB-47545:
Cryo-EM map of 2G12 IgG BCR ectodomain, Population 2
Method: single particle / : Thakur B, Acharya P

EMDB-47546:
Cryo-EM map of 2G12 IgG BCR ectodomain, Population 3
Method: single particle / : Thakur B, Acharya P

EMDB-47564:
Locally Refined Cryo-EM map of 2G12 IgG BCR receptor lacking Fab region view
Method: single particle / : Thakur B, Acharya P

PDB-9e6g:
Locally Refined Cryo-EM map of 2G12 IgG BCR receptor lacking Fab region view
Method: single particle / : Thakur B, Acharya P

PDB-9nz0:
Cryo-EM structure of vaccine elicited antibody 22F5 bound to the post-fusion conformation of the LayV-F glycoprotein
Method: single particle / : Kumar U, May A, Acharya P

EMDB-48715:
Cryo-EM map of vaccine elicited antibody 22F5 bound to post-fusion conformation of Langya virus F protein
Method: single particle / : Kumar U, Acharya P

EMDB-49948:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

PDB-9nz2:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

EMDB-76979:
Cryo-ET of mitochondrial membrane in direct interaction with alpha-synuclein exhibiting membrane morphological distortion
Method: electron tomography / : Jaber N, Dai W

EMDB-76980:
Supplemental: irregularly shaped mitochondria interacting with alpha-synuclein
Method: electron tomography / : Jaber N, Dai W

EMDB-76981:
Supplemental: alpha-synuclein oligomers on the surface of a mitochondrial membrane
Method: electron tomography / : Jaber N, Dai W

EMDB-76983:
Supplemental: mitochondria not associated with alpha-synuclein
Method: electron tomography / : Jaber N, Dai W

EMDB-70500:
Cryo-EM structure of bovine phosphodiesterase 6 bound to CB-5083
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

EMDB-70501:
Cryo-EM structure of human p97/VCP bound to inhibitor GND-135
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

PDB-9ohm:
Cryo-EM structure of bovine phosphodiesterase 6 bound to CB-5083
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

PDB-9ohn:
Cryo-EM structure of human p97/VCP bound to inhibitor GND-135
Method: single particle / : Crawford J, Munuganti R, Leung C, Singh K, Gates E, Zhu X, Bally M, Dos Santos N, Sharifiaghdam M, Nosrati Z, Axerio-Cilies P, Berezuk A, Cholak S, Cameron D, Subramaniam S

EMDB-71307:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-71308:
eN49P7-FRv1-23 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9p6e:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9p6g:
eN49P7-FRv1-23 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-56907:
Polyclonal immune complex comprising AMC009 SOSIP.v4.2 in complex with polyclonal antibodies from rabbit UA0062 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56914:
Polyclonal immune complex comprising AMC009 SOSIP.v4.2 in complex with polyclonal antibodies from rabbit UA0063 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56922:
Polyclonal immune complex comprising AMC009 SOSIP.v4.2 in complex with polyclonal antibodies from rabbit UA0065 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56923:
Polyclonal immune complex comprising AMC009 SOSIP.v4.2 in complex with polyclonal antibodies from rabbit UA0064 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56924:
Polyclonal immune complex comprising AMC009 SOSIP.v4.2 in complex with polyclonal antibodies from rabbit UA0066 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56925:
Polyclonal immune complex comprising B41 SOSIP.v4.1 in complex with polyclonal antibodies from rabbit r1644 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56927:
Polyclonal immune complex comprising B41 SOSIP.v4.1 in complex with polyclonal antibodies from rabbit r1645 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56935:
Polyclonal immune complex comprising B41 SOSIP.v4.1 in complex with polyclonal antibodies from rabbit r1648 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56940:
Polyclonal immune complex comprising CH505(B) SOSIP.v8.1 in complex with polyclonal antibodies from rabbit r2473 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56941:
Polyclonal immune complex comprising CH505(B) SOSIP.v8.1 in complex with polyclonal antibodies from rabbit r2475 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56942:
Polyclonal immune complex comprising CH505(B) SOSIP.v8.1 in complex with polyclonal antibodies from rabbit r2476 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-56943:
Polyclonal immune complex comprising CH505(B) SOSIP.v8.1 in complex with polyclonal antibodies from rabbit r2477 - Obtained by negative stain EM.
Method: single particle / : Brown S, Eray ER, Antanasijevic A

EMDB-60887:
Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (GT/TT CDN) in the pre-strand exchange state
Method: single particle / : Soma T, Hiraizumi M, Yamashita K, Nishimasu H

EMDB-60888:
Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (GT/TT CDN) in the post-strand exchange state
Method: single particle / : Soma T, Hiraizumi M, Yamashita K, Nishimasu H

EMDB-60889:
Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (CA/CA CDN) in the pre-strand exchange state
Method: single particle / : Soma T, Hiraizumi M, Yamashita K, Nishimasu H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more