[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 62 items for (author: hung & mc)

EMDB-48538:
CryoEM Structure of the Candida albicans Group I Intron-GMP Complex
Method: single particle / : Chung K, Xu L, Liu T, Pyle A

EMDB-48539:
CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Magnesium Condition
Method: single particle / : Chung K, Xu L, Liu T, Pyle A

EMDB-48540:
CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Calcium Condition
Method: single particle / : Chung K, Xu L, Liu T, Pyle A

EMDB-52203:
Cryo-EM structure of CD36 protein complex with Fab
Method: single particle / : Nazarov S, Yu YR

EMDB-44627:
Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C1533 (local refinement of NTD and C1533)
Method: single particle / : Rubio AA, Abernathy ME, Barnes CO

EMDB-44628:
Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C1596
Method: single particle / : Rubio AA, Abernathy ME, Barnes CO

EMDB-44629:
Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C952
Method: single particle / : Rubio AA, Abernathy ME, Barnes CO

EMDB-42775:
Acinetobacter baumannii Tse15 Rhs effector, toxin cleavage mutant (D1369N, D1391N)
Method: single particle / : Hayes BK, Venugopal H, McGowan S

EMDB-42792:
Acinetobacter baumannii Tse15 Rhs effector
Method: single particle / : Hayes BK, Venugopal H, McGowan S

PDB-8uxt:
Acinetobacter baumannii Tse15 Rhs effector, toxin cleavage mutant (D1369N, D1391N)
Method: single particle / : Hayes BK, Venugopal H, McGowan S

PDB-8uy4:
Acinetobacter baumannii Tse15 Rhs effector
Method: single particle / : Hayes BK, Venugopal H, McGowan S

EMDB-36488:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Composite map)
Method: single particle / : Banerjee R, Khanppnavar B, Maharana J, Saha S, Korkhov VM, Shukla AK

EMDB-37212:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Receptor original map)
Method: single particle / : Banerjee R, Khanppnavar B, Maharana J, Saha S, Korkhov VM, Shukla AK

EMDB-37214:
Structure of Duffy Antigen Receptor for Chemokines (DARC)/ACKR1 in complex with the chemokine, CCL7 (Ligand/CCL7 focused map)
Method: single particle / : Banerjee R, Khanppnavar B, Maharana J, Saha S, Korkhov VM, Shukla AK

EMDB-40825:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

PDB-8sx3:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

EMDB-29220:
CryoEM structure of HLA-A2 MAGEA4 (230-239) in complex with REGN6972 Fab and 2M2 Fab
Method: single particle / : Saotome K, Franklin MC

EMDB-29221:
CryoEM structure of HLA-A2 MAGEA4 (286-294) in complex with H2aM31345N Fab and 2M2 Fab
Method: single particle / : Saotome K, Franklin MC

EMDB-33145:
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in apo form
Method: single particle / : Wang CH, Hsieh JT, Ho MC, Hung HC

EMDB-33146:
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor EA
Method: single particle / : Wang CH, Hsieh JT, Ho MC, Hung HC

EMDB-33147:
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor MDSA
Method: single particle / : Wang CH, Hsieh JT, Ho MC, Hung HC

EMDB-25007:
CryoEM structure of the Caveolin-1 8S complex
Method: single particle / : Porta JP, Ohi MD

PDB-7sc0:
CryoEM structure of the Caveolin-1 8S complex
Method: single particle / : Porta JP, Ohi MD, Kenworthy AK, Karakas E

EMDB-25044:
Cryo-EM structure of the SHOC2:PP1C:MRAS complex
Method: single particle / : Liau NPD, Johnson MC

EMDB-23949:
The insulin receptor ectodomain in complex with a venom hybrid insulin analog - "head" region
Method: single particle / : Blakely AD, Xiong X

EMDB-23950:
The insulin receptor ectodomain in complex with four venom hybrid insulins - symmetric conformation
Method: single particle / : Blakely AD, Xiong X

EMDB-23951:
The insulin receptor ectodomain in complex with three venom hybrid insulin molecules - asymmetric conformation
Method: single particle / : Blakely AD, Xiong X

EMDB-25792:
Cryo-EM structure of the spike of SARS-CoV-2 Omicron variant of concern
Method: single particle / : Zhou T, Tsybovsky T

PDB-7tb4:
Cryo-EM structure of the spike of SARS-CoV-2 Omicron variant of concern
Method: single particle / : Zhou T, Tsybovsky T, Kwong PD

EMDB-25448:
Negative-stain EM reconstruction of SpFN_1B-06-PL, a SARS-CoV-2 spike fused to H.pylori ferritin nanoparticle vaccine candidate
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25449:
RFN_131, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Receptor-Binding Domain
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25450:
pCoV146, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike Receptor-Binding and N-Terminal Domains
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25451:
pCoV111, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike S1 Subunit
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-23914:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody B1-182.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky T

EMDB-23915:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody B1-182.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky T

PDB-7mlz:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody B1-182.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky T, Kwong PD

PDB-7mm0:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody B1-182.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky T, Kwong PD

EMDB-23498:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody A23-58.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky Y

EMDB-23499:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody A23-58.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky T

PDB-7lrs:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody A23-58.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky Y

PDB-7lrt:
Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody A23-58.1 that targets the receptor-binding domain
Method: single particle / : Zhou T, Tsybovsky T

EMDB-23521:
Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442
Method: single particle / : Gilman MSA, McLellan JS

PDB-7lue:
Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442
Method: single particle / : Gilman MSA, McLellan JS

EMDB-23520:
Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B
Method: single particle / : Wrapp D, McLellan JS

PDB-7luc:
Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B
Method: single particle / : Wrapp D, McLellan JS

EMDB-30311:
Human DMC1 pre-synaptic complexes
Method: helical / : Luo SC, Yeh HY, Chi P, Ho MC, Tsai MD

EMDB-30308:
Human DMC1 post-synaptic complexes
Method: helical / : Luo SC, Yeh HY, Chi P, Ho MC, Tsai MD

EMDB-30309:
Human DMC1 post-synaptic complexes with mismatched dsDNA
Method: helical / : Luo SC, Yeh HY, Chi P, Ho MC, Tsai MD

EMDB-30310:
Human RAD51 post-synaptic complexes mutant (V273P, D274G)
Method: helical / : Chi HY, Ho MC, Tsai MD, Luo SC, Yeh HY

EMDB-30366:
Human DMC1 Q244M mutant of the post-synaptic complexes
Method: helical / : Chi HY, Ho MC, Tsai MD, Luo SC, Yeh HY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more