Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2KPR
DownloadVisualize
BU of 2kpr by Molmil
Monomeric intronic human chl1 gene quadruplex DNA NMR, 17 structures
Descriptor: 5'-D(*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*GP*GP*GP*TP*GP*GP*GP*T)-3'
Authors:Kuryavyi, V, Patel, D.J.
Deposit date:2009-10-19
Release date:2010-03-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a Unique G-Quadruplex Scaffold Adopted by a Guanosine-Rich Human Intronic Sequence.
Structure, 18, 2010
2KQG
DownloadVisualize
BU of 2kqg by Molmil
A G-rich sequence within the c-kit oncogene promoter forms a parallel G-quadruplex having asymmetric G-tetrad dynamics
Descriptor: 5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*CP*GP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3', POTASSIUM ION
Authors:Hsu, S.-T.D, Varnai, P, Bugaut, A, Reszka, A.P, Neidle, S, Balasubramanian, S.
Deposit date:2009-11-05
Release date:2009-11-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A G-rich sequence within the c-kit oncogene promoter forms a parallel G-quadruplex having asymmetric G-tetrad dynamics
J.Am.Chem.Soc., 131, 2009
2KQH
DownloadVisualize
BU of 2kqh by Molmil
A G-rich sequence within the c-kit oncogene promoter forms a parallel G-quadruplex having asymmetric G-tetrad dynamics
Descriptor: 5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*GP*CP*GP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3', POTASSIUM ION
Authors:Hsu, S.-T.D, Varnai, P, Bugaut, A, Reszka, A.P, Neidle, S, Balasubramanian, S.
Deposit date:2009-11-05
Release date:2009-11-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A G-rich sequence within the c-kit oncogene promoter forms a parallel G-quadruplex having asymmetric G-tetrad dynamics
J.Am.Chem.Soc., 131, 2009
2LPW
DownloadVisualize
BU of 2lpw by Molmil
human CEB25 minisatellite G-quadruplex
Descriptor: DNA (26-MER)
Authors:Amrane, S, Adrian, M, Heddi, B, Serero, A, Nicolas, A, Mergny, J.L, Phan, A.T.
Deposit date:2012-02-20
Release date:2012-03-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Formation of Pearl-Necklace Monomorphic G-Quadruplexes in the Human CEB25 Minisatellite.
J.Am.Chem.Soc., 134, 2012
2N9Q
DownloadVisualize
BU of 2n9q by Molmil
Photoswitchable G-quadruplex
Descriptor: DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), POTASSIUM ION
Authors:Thevarpadam, J, Bessi, I, Binas, O, Goncalves, D.P.N, Slavov, C, Jonker, H.R.A, Richter, C, Wachtveitl, J, Schwalbe, H, Heckel, A.
Deposit date:2015-12-02
Release date:2016-02-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Photoresponsive Formation of an Intermolecular Minimal G-Quadruplex Motif.
Angew.Chem.Int.Ed.Engl., 55, 2016
2N2D
DownloadVisualize
BU of 2n2d by Molmil
Structure of DNA G-quadruplex adopted by ALS and FTD related GGGGCC repeat with G21 to Br-G21 substitution
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*CP*GP*GP*(BGM)P*G)-3')
Authors:Brcic, J, Plavec, J.
Deposit date:2015-05-06
Release date:2015-09-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of a DNA quadruplex containing ALS and FTD related GGGGCC repeat stabilized by 8-bromodeoxyguanosine substitution.
Nucleic Acids Res., 43, 2015
2LK7
DownloadVisualize
BU of 2lk7 by Molmil
Monomer-dimer equilibrium for 5'-5' stacking of propeller-type parallel-stranded G-quadruplexes: NMR structural study
Descriptor: DNA (5'-D(*TP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Do, N.Q, Phan, A.T.
Deposit date:2011-10-07
Release date:2012-10-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Monomer-Dimer Equilibrium for the 5'-5' Stacking of Propeller-Type Parallel-Stranded G-Quadruplexes: NMR Structural Study
Chemistry, 2012
2MGN
DownloadVisualize
BU of 2mgn by Molmil
Solution structure of a G-quadruplex bound to the bisquinolinium compound Phen-DC3
Descriptor: 5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3', N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
Authors:Chung, W.J, Heddi, B, Hamon, F, Teulade-Fichou, M.P, Phan, A.T.
Deposit date:2013-11-01
Release date:2014-01-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of a G-quadruplex Bound to the Bisquinolinium Compound Phen-DC3.
Angew.Chem.Int.Ed.Engl., 53, 2014
6TR2
DownloadVisualize
BU of 6tr2 by Molmil
Pre-folded structures govern folding pathways of human telomeric G-quadruplexes
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3')
Authors:Wang, B, Frelih, T, Plavec, J, Sket, P.
Deposit date:2019-12-17
Release date:2020-01-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Pre-folded structures govern folding pathways of human telomeric G-quadruplexes.
Nucleic Acids Res., 48, 2020
2KAZ
DownloadVisualize
BU of 2kaz by Molmil
Folding topology of a bimolecular DNA quadruplex containing a stable mini-hairpin motif within the connecting loop
Descriptor: 5'-D(*DGP*DGP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DTP*DGP*DGP*DG)-3', POTASSIUM ION
Authors:Balkwill, G.D, Garner, T.P, Williams, H.E.L, Searle, M.S.
Deposit date:2008-11-18
Release date:2008-12-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Folding topology of a bimolecular DNA quadruplex containing a stable mini-hairpin motif within the diagonal loop
J.Mol.Biol., 385, 2009
2M1G
DownloadVisualize
BU of 2m1g by Molmil
Parallel human telomeric quadruplex containing 2'F-ANA substitutions
Descriptor: 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*(GFL)P*GP*GP*T)-3'
Authors:Martin-Pintado, N, Yahyaee-Anzahaee, M, Deleavey, G.F, Portella, G, Orozco, M, Damha, M.J, Gonzalez, C.
Deposit date:2012-11-27
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dramatic effect of furanose c2' substitution on structure and stability: directing the folding of the human telomeric quadruplex with a single fluorine atom.
J.Am.Chem.Soc., 135, 2013
2KKA
DownloadVisualize
BU of 2kka by Molmil
Human telomere DNA two-tetrad quadruplex structure in K+ solution
Descriptor: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
Authors:Zhang, Z, Dai, J, Yang, D.
Deposit date:2009-06-16
Release date:2009-12-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.
Nucleic Acids Res., 38, 2010
2MBJ
DownloadVisualize
BU of 2mbj by Molmil
Structure of an antiparallel (2+2) G-quadruplex formed by human telomeric repeats in Na+ solution (with G22-to-BrG substitution)
Descriptor: DNA_(27-MER)
Authors:Lim, K.W, Ng, V.C.M, Martin-Pintado, N, Heddi, B, Phan, A.T.
Deposit date:2013-08-02
Release date:2013-09-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the human telomere in Na+ solution: an antiparallel (2+2) G-quadruplex scaffold reveals additional diversity.
Nucleic Acids Res., 41, 2013
2N4Y
DownloadVisualize
BU of 2n4y by Molmil
Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome
Descriptor: DNA_(5'-D(*CP*TP*GP*GP*GP*CP*GP*GP*GP*AP*CP*TP*GP*GP*GP*GP*AP*GP*TP*GP*GP*T)-3')
Authors:DeNicola, B, Lech, C.J, Heddi, B, Regmi, S, Frasson, I, Perrone, R, Richter, S.N, Phan, A.T.
Deposit date:2015-07-02
Release date:2016-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome.
Nucleic Acids Res., 44, 2016
2KM3
DownloadVisualize
BU of 2km3 by Molmil
Structure of an intramolecular G-quadruplex containing a G.C.G.C tetrad formed by human telomeric variant CTAGGG repeats
Descriptor: DNA (5'-D(*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP*GP*GP*G)-3')
Authors:Lim, K.W, Alberti, P, Guedin, A, Lacroix, L, Riou, J.F, Royle, N.J, Mergny, J.L, Phan, A.T.
Deposit date:2009-07-17
Release date:2009-11-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Sequence variant (CTAGGG)n in the human telomere favors a G-quadruplex structure containing a G.C.G.C tetrad
Nucleic Acids Res., 37, 2009
2L88
DownloadVisualize
BU of 2l88 by Molmil
Solution structure of all parallel G-quadruplex formed by the oncogene RET promoter sequence
Descriptor: 5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'
Authors:Tong, X, Cao, C.
Deposit date:2011-01-06
Release date:2011-05-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of all parallel G-quadruplex formed by the oncogene RET promoter sequence
Nucleic Acids Res., 39, 2011
2LOD
DownloadVisualize
BU of 2lod by Molmil
Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*CP*GP*GP*G)-3')
Authors:Marusic, M, Sket, P, Bauer, L, Viglasky, V, Plavec, J.
Deposit date:2012-01-23
Release date:2012-05-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops.
Nucleic Acids Res., 40, 2012
2M6V
DownloadVisualize
BU of 2m6v by Molmil
Solution NMR structure of the d(GGGTTGGGTTTTGGGTGGG) quadruplex in sodium conditions
Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*TP*GP*GP*G)-3')
Authors:Karsisiotis, A.I, Webba da Silva, M.
Deposit date:2013-04-10
Release date:2014-07-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
2M6W
DownloadVisualize
BU of 2m6w by Molmil
Solution NMR structure of the d(GGGGTTGGGGTTTTGGGGAAGGGG) quadruplex in sodium conditions
Descriptor: DNA (5'-D(*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*AP*AP*GP*GP*GP*G)-3')
Authors:Karsisiotis, A.I, Webba da Silva, M.
Deposit date:2013-04-19
Release date:2014-07-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
7PNE
DownloadVisualize
BU of 7pne by Molmil
Parallel Q-D hybrid with 3' duplex stem-loop as a lateral snapback loop
Descriptor: TTAMycdup-3sbl
Authors:Vianney, Y.M, Weisz, K.
Deposit date:2021-09-06
Release date:2021-12-29
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Indoloquinoline Ligands Favor Intercalation at Quadruplex-Duplex Interfaces.
Chemistry, 28, 2022
5MTA
DownloadVisualize
BU of 5mta by Molmil
G-quadruplex formed within promoters of Plasmodium falciparum B var genes
Descriptor: UpsB-Q-1, DNA (34-MER)
Authors:Juribasic Kulcsar, M, Plavec, J.
Deposit date:2017-01-09
Release date:2018-02-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stabilizing interactions in long-loop G-quadruplex formed within promoters of Plasmodium falciparum B var genes
To Be Published
5MTG
DownloadVisualize
BU of 5mtg by Molmil
G-quadruplex formed within promoters of Plasmodium falciparum B var genes - form I
Descriptor: UpsB-Q-1 DNA (34-MER)
Authors:Juribasic Kulcsar, M, Plavec, J.
Deposit date:2017-01-09
Release date:2018-02-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stabilizing interactions in long-loop G-quadruplex formed within promoters of Plasmodium falciparum B var genes
To Be Published
8XAK
DownloadVisualize
BU of 8xak by Molmil
Structure of Pif1-G4 complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase PIF1, DNA (34-MER), ...
Authors:Hong, Z, Song, H.
Deposit date:2023-12-04
Release date:2024-07-31
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Eukaryotic Pif1 helicase unwinds G-quadruplex and dsDNA using a conserved wedge.
Nat Commun, 15, 2024
2LYG
DownloadVisualize
BU of 2lyg by Molmil
Fuc_TBA
Descriptor: 2-hydroxyethyl 6-deoxy-beta-L-galactopyranoside, DNA (5'-D(P*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3')
Authors:Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avio, A, Eritja, R, Gonzalez-Ibaez, C, Morales, J.
Deposit date:2012-09-18
Release date:2014-01-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Carbohydrate-DNA interactions at G-quadruplexes: folding and stability changes by attaching sugars at the 5'-end.
Chemistry, 19, 2013
1U64
DownloadVisualize
BU of 1u64 by Molmil
The Solution Structure of d(G3T4G4)2
Descriptor: 5'-D(*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3'
Authors:Sket, P, Crnugelj, M, Plavec, J.
Deposit date:2004-07-29
Release date:2004-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:d(G3T4G4) forms unusual dimeric G-quadruplex structure with the same general fold in the presence of K+, Na+ or NH4+ ions.
Bioorg.Med.Chem., 12, 2004

227111

数据于2024-11-06公开中

PDB statisticsPDBj update infoContact PDBjnumon