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PDB: 448 results

4LUQ
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BU of 4luq by Molmil
Crystal structure of virulence effector Tse3 in complex with neutralizer Tsi3
Descriptor: CALCIUM ION, Uncharacterized protein
Authors:Wang, T, Li, L, Zhang, W.
Deposit date:2013-07-25
Release date:2013-09-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural Insights on the Bacteriolytic and Self-protection Mechanism of Muramidase Effector Tse3 in Pseudomonas aeruginosa
J.Biol.Chem., 288, 2013
8Y1R
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BU of 8y1r by Molmil
in situ room temperature Laue crystallography
Descriptor: Lysozyme C
Authors:Wang, Z.J, Wang, S.S, Pan, Q.Y, Yu, L, Su, Z.H, Yang, T.Y, Wang, Y.Z, Zhang, W.Z, Hao, Q, Gao, X.Y.
Deposit date:2024-01-25
Release date:2024-02-07
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Single pulse data collection with an X-ray chopper at in situ room temperature Laue crystallography beamline BL03HB
Nucl Instrum Methods Phys Res A, 1069, 2024
4FUL
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BU of 4ful by Molmil
PI3 Kinase Gamma bound to a pyrmidine inhibitor
Descriptor: 4-({4-[3-(piperidin-1-ylcarbonyl)phenyl]pyrimidin-2-yl}amino)benzenesulfonamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Gopalsamy, A, Bennett, E.M, Shi, M, Zhang, W.G, Bard, J, Yu, K.
Deposit date:2012-06-28
Release date:2012-10-17
Last modified:2012-10-31
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Identification of pyrimidine derivatives as hSMG-1 inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
4HTL
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BU of 4htl by Molmil
Lmo2764 protein, a putative N-acetylmannosamine kinase, from Listeria monocytogenes
Descriptor: 1,2-ETHANEDIOL, Beta-glucoside kinase
Authors:Osipiuk, J, Mack, J, Endres, M, Salazar, J, Zhang, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-11-01
Release date:2012-11-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Lmo2764 protein, a putative N-acetylmannosamine kinase, from Listeria monocytogenes.
To be Published
4FQA
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BU of 4fqa by Molmil
Crystal structure of toxic effector Tse1
Descriptor: toxic effector Tse1
Authors:Li, L, Zhang, W, Wang, T.
Deposit date:2012-06-25
Release date:2013-06-26
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight on toxic effector Tse1
To be Published
4GIF
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BU of 4gif by Molmil
C-terminal coiled-coil domain of transient receptor potential channel TRPP3 (PKD2L1, Polycystin-L)
Descriptor: Polycystic kidney disease 2-like 1 protein
Authors:Yu, Y, Ulbrich, M.H, Li, M.-H, Dobbins, S, Zhang, W.K, Tong, L, Isacoff, E.Y, Yang, J.
Deposit date:2012-08-08
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular mechanism of the assembly of an acid-sensing receptor ion channel complex.
Nat Commun, 3, 2012
5VKQ
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BU of 5vkq by Molmil
Structure of a mechanotransduction ion channel Drosophila NOMPC in nanodisc
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, No mechanoreceptor potential C isoform L
Authors:Jin, P, Bulkley, D, Guo, Y, Zhang, W, Guo, Z, Huynh, W, Wu, S, Meltzer, S, Chen, T, Jan, L.Y, Jan, Y.-N, Cheng, Y.
Deposit date:2017-04-22
Release date:2017-06-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Electron cryo-microscopy structure of the mechanotransduction channel NOMPC.
Nature, 547, 2017
5YMY
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BU of 5ymy by Molmil
The structure of the complex between Rpn13 and K48-diUb
Descriptor: Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Liu, Z, Dong, X, Gong, Z, Yi, H.W, Liu, K, Yang, J, Zhang, W.P, Tang, C.
Deposit date:2017-10-22
Release date:2019-03-13
Last modified:2019-04-24
Method:SOLUTION NMR
Cite:Structural basis for the recognition of K48-linked Ub chain by proteasomal receptor Rpn13.
Cell Discov, 5, 2019
6J1U
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BU of 6j1u by Molmil
influenza virus nucleoprotein with a specific inhibitor
Descriptor: Nucleoprotein, ~{N}-[4-[(4-~{tert}-butylphenyl)carbonylamino]phenyl]-2,3-dihydro-1,4-benzodioxine-6-carboxamide
Authors:Pang, B, Zhang, W.Z, Zhang, H.M, Hao, Q.
Deposit date:2018-12-29
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of a Novel Specific Inhibitor Targeting Influenza A Virus Nucleoprotein with Pleiotropic Inhibitory Effects on Various Steps of the Viral Life Cycle.
J.Virol., 95, 2021
8OG2
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BU of 8og2 by Molmil
Crystal structure of CREBBP histone acetyltransferase domain in complex with Coenzyme A
Descriptor: COENZYME A, SODIUM ION, SULFATE ION, ...
Authors:Mechaly, A.E, Zhang, W, Haouz, A, Green, M, Rodrigues-Lima, F.
Deposit date:2023-03-17
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structure of CREBBP histone acetyltransferase domain in complex with Coenzyme A
To Be Published
6U9I
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BU of 6u9i by Molmil
Crystal structure of BvnE pinacolase from Penicillium brevicompactum
Descriptor: BvnE, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Ye, Y, Du, L, Zhang, X, Newmister, S.A, McCauley, M, Alegre-Requena, J.V, Zhang, W, Mu, S, Minami, A, Fraley, A.E, Adrover-Castellano, M.L, Carney, N, Shende, V.V, Oikawa, H, Kato, H, Tsukamoto, S, Paton, R.S, Williams, R.M, Sherman, D.H, Li, S.
Deposit date:2019-09-09
Release date:2020-09-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.777 Å)
Cite:Fungal-derived brevianamide assembly by a stereoselective semipinacolase.
Nat Catal, 3, 2020
6J36
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BU of 6j36 by Molmil
crystal structure of Mycoplasma hyopneumoniae Enolase
Descriptor: Enolase, GLYCEROL, SULFATE ION
Authors:Chen, R, Zhang, S, Gan, R, Xie, X, Feng, Z, Wang, W, Ran, T, Zhang, W, Xiang, Q, Shao, G.
Deposit date:2019-01-04
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Featured Species-Specific Loops Are Found in the Crystal Structure ofMhpEno, a Cell Surface Adhesin FromMycoplasma hyopneumoniae.
Front Cell Infect Microbiol, 9, 2019
2LSP
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BU of 2lsp by Molmil
solution structures of BRD4 second bromodomain with NF-kB-K310ac peptide
Descriptor: Bromodomain-containing protein 4, NF-kB-K310ac peptide
Authors:Zhang, G, Liu, R, Zhong, Y, Plotnikov, A.N, Zhang, W, Rusinova, E, Gerona-Nevarro, G, Moshkina, N, Joshua, J, Chuang, P.Y, Ohlmeyer, M, He, J, Zhou, M.-M.
Deposit date:2012-05-03
Release date:2012-07-18
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Down-regulation of NF-kappa B transcriptional activity in HIV-associated kidney disease by BRD4 inhibition.
J.Biol.Chem., 287, 2012
5MDN
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BU of 5mdn by Molmil
Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis
Descriptor: DNA polymerase, MAGNESIUM ION
Authors:Guo, J, Zhang, W, Coker, A.R, Wood, S.P, Cooper, J.B, Rashid, N, Akhtar, M.
Deposit date:2016-11-12
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
Acta Crystallogr D Struct Biol, 73, 2017
2MP0
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BU of 2mp0 by Molmil
Protein Phosphorylation upon a Fleeting Encounter
Descriptor: Glucose-specific phosphotransferase enzyme IIA component, PHOSPHITE ION, Phosphoenolpyruvate-protein phosphotransferase
Authors:Xing, Q, Yang, J, Huang, P, Zhang, W, Tang, C.
Deposit date:2014-05-08
Release date:2014-08-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Visualizing an ultra-weak protein-protein interaction in phosphorylation signaling.
Angew.Chem.Int.Ed.Engl., 53, 2014
3EWV
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BU of 3ewv by Molmil
Crystal Structure of calmodulin complexed with a peptide
Descriptor: CALCIUM ION, Calmodulin, Tumor necrosis factor receptor superfamily member 16
Authors:Jiang, T, Cao, P, Gong, Y, Yu, H.J, Gui, W.J, Zhang, W.T.
Deposit date:2008-10-16
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the mechanism of calmodulin binding to death receptors.
Acta Crystallogr.,Sect.D, 70, 2014
3EWT
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BU of 3ewt by Molmil
Crystal Structure of calmodulin complexed with a peptide
Descriptor: CALCIUM ION, Calmodulin, Tumor necrosis factor receptor superfamily member 6
Authors:Jiang, T, Cao, P, Gong, Y, Yu, H.J, Gui, W.J, Zhang, W.T.
Deposit date:2008-10-16
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the mechanism of calmodulin binding to death receptors.
Acta Crystallogr.,Sect.D, 70, 2014
6NWP
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BU of 6nwp by Molmil
Chronic traumatic encephalopathy Type I Tau filament
Descriptor: Microtubule-associated protein tau
Authors:Falcon, B, Zivanov, J, Zhang, W, Murzin, A.G, Garringer, H.J, Vidal, R, Crowther, R.A, Newell, K.L, Ghetti, B, Goedert, M, Scheres, H.W.
Deposit date:2019-02-07
Release date:2019-03-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Novel tau filament fold in chronic traumatic encephalopathy encloses hydrophobic molecules.
Nature, 568, 2019
6NWQ
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BU of 6nwq by Molmil
Chronic traumatic encephalopathy Type II Tau filament
Descriptor: Microtubule-associated protein tau
Authors:Falcon, B, Zivanov, J, Zhang, W, Murzin, A.G, Garringer, H.J, Vidal, R, Crowther, R.A, Newell, K.L, Ghetti, B, Goedert, M, Scheres, H.W.
Deposit date:2019-02-07
Release date:2019-03-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Novel tau filament fold in chronic traumatic encephalopathy encloses hydrophobic molecules.
Nature, 568, 2019
7QIG
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BU of 7qig by Molmil
Infectious mouse-adapted RML scrapie prion fibril purified from terminally-infected mouse brains
Descriptor: Major prion protein
Authors:Manka, S.W, Zhang, W, Wenborn, A, Betts, J, Joiner, S, Saibil, H.R, Collinge, J, Wadsworth, J.D.F.
Deposit date:2021-12-14
Release date:2022-07-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:2.7 angstrom cryo-EM structure of ex vivo RML prion fibrils.
Nat Commun, 13, 2022
8FZC
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BU of 8fzc by Molmil
HIV-2 Gag Capsid from Immature Virus-like Particles
Descriptor: Spacer peptide 2
Authors:Talledge, N, Zhang, W, Mansky, L.M.
Deposit date:2023-01-28
Release date:2023-06-07
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:HIV-2 Immature Particle Morphology Provides Insights into Gag Lattice Stability and Virus Maturation.
J.Mol.Biol., 435, 2023
6OWL
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BU of 6owl by Molmil
RNA oligonucleotides with 3'-arabino guanosine co-crystallized with GMP
Descriptor: RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*R)-3'), RNA (5'-R(P*G)-3')
Authors:Szostak, J.W, Kim, S, Zhang, W.
Deposit date:2019-05-10
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Model for the Emergence of RNA from a Prebiotically Plausible Mixture of Ribonucleotides, Arabinonucleotides, and 2'-Deoxynucleotides.
J.Am.Chem.Soc., 142, 2020
8F2O
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BU of 8f2o by Molmil
Phi-29 expanded, DNA-packaged fiberless prohead
Descriptor: Major capsid protein
Authors:Woodson, M.E, Morais, M.C, Jardine, P.J, Zhang, W.
Deposit date:2022-11-08
Release date:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Scaffold Oligomers Control Prohead Expansion
To Be Published
8F2N
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BU of 8f2n by Molmil
Phi-29 partially-expanded fiberless prohead
Descriptor: Major capsid protein
Authors:Woodson, M.E, Morais, M.C, Scott, S.D, Choi, K.H, Jardine, P.J, Zhang, W.
Deposit date:2022-11-08
Release date:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Phi-29 partially-expanded fiberless prohead
To Be Published
3RZJ
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BU of 3rzj by Molmil
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Descriptor: 2-OXOGLUTARIC ACID, 5'-D(*CP*TP*GP*TP*CP*TP*(ME6)P*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*GP*AP*CP*A)-3', ...
Authors:Yi, C, Chen, B, Qi, B, Zhang, W, Jia, G, Zhang, L, Li, C, Dinner, A, Yang, C, He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012

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PDB entries from 2024-10-16

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