Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12895 results

6K4U
DownloadVisualize
BU of 6k4u by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGA PAM)
Descriptor: CRISPR-associated endonuclease Cas9, non-target DNA, sgRNA, ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-27
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
7EXC
DownloadVisualize
BU of 7exc by Molmil
Crystal structure of T2R-TTL-1129A2 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Yang, J.H, Yan, W.
Deposit date:2021-05-26
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure-Based Design and Synthesis of N-Substituted 3-Amino-beta-Carboline Derivatives as Potent alpha beta-Tubulin Degradation Agents
J.Med.Chem., 65, 2022
6K63
DownloadVisualize
BU of 6k63 by Molmil
The crystal structure of cytidine deaminase from Klebsiella pneumoniae
Descriptor: 1,4-DIETHYLENE DIOXIDE, Cytidine deaminase, ZINC ION
Authors:Liu, W, Shang, F, Lan, J, Chen, Y, Wang, L, Xu, Y.
Deposit date:2019-06-01
Release date:2019-07-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.073 Å)
Cite:Biochemical and structural analysis of the Klebsiella pneumoniae cytidine deaminase CDA.
Biochem.Biophys.Res.Commun., 519, 2019
5VZX
DownloadVisualize
BU of 5vzx by Molmil
Crystal structure of crenezumab Fab
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Crenezumab Fab heavy chain, ...
Authors:Ultsch, M, Wang, W.
Deposit date:2017-05-29
Release date:2017-08-09
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structure of Crenezumab Complex with Abeta Shows Loss of beta-Hairpin.
Sci Rep, 6, 2016
6K04
DownloadVisualize
BU of 6k04 by Molmil
Crystal structure of BRD2(BD2)with ligand BY27 bound
Descriptor: (6~{R})-~{N}-(4-chlorophenyl)-1-methyl-8-(1-methylpyrazol-4-yl)-5,6-dihydro-4~{H}-[1,2,4]triazolo[4,3-a][1]benzazepin-6-amine, Bromodomain-containing protein 2
Authors:Lu, T, Lu, W, Chen, D, Zhao, Y, Luo, C.
Deposit date:2019-05-05
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.251 Å)
Cite:Discovery, structural insight, and bioactivities of BY27 as a selective inhibitor of the second bromodomains of BET proteins.
Eur.J.Med.Chem., 182, 2019
6K2H
DownloadVisualize
BU of 6k2h by Molmil
structural characterization of mutated NreA protein in nitrate binding site from staphylococcus aureus.
Descriptor: 1,2-ETHANEDIOL, NreA
Authors:Sangare, L, Chen, W, Wang, C, Chen, X, Wu, M, Zhang, X, Zang, J.
Deposit date:2019-05-14
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the conformational change of Staphylococcus aureus NreA at C-terminus.
Biotechnol.Lett., 42, 2020
5W5E
DownloadVisualize
BU of 5w5e by Molmil
Re-refinement of the pyocin tube structure
Descriptor: FIIR2 protein
Authors:Wang, F, Zheng, W, Taylor, N.M, Guerrero-Ferreira, R.C, Leiman, P.G, Egelman, E.H.
Deposit date:2017-06-15
Release date:2017-08-16
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit.
Structure, 25, 2017
6KC7
DownloadVisualize
BU of 6kc7 by Molmil
Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in seed-base paring state
Descriptor: CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*AP*AP*AP*GP*TP*T)-3'), ...
Authors:Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
Deposit date:2019-06-27
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
5ZMD
DownloadVisualize
BU of 5zmd by Molmil
Crystal structure of FTO in complex with m6dA modified ssDNA
Descriptor: Alpha-ketoglutarate-dependent dioxygenase FTO, DNA (5'-D(P*TP*CP*TP*(6MA)P*TP*AP*TP*CP*G)-3'), MANGANESE (II) ION, ...
Authors:Zhang, X, Wei, L.H, Luo, J, Xiao, Y, Liu, J, Zhang, W, Zhang, L, Jia, G.F.
Deposit date:2018-04-02
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural insights into FTO's catalytic mechanism for the demethylation of multiple RNA substrates.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6K6K
DownloadVisualize
BU of 6k6k by Molmil
The crystal structure of light-driven cyanobacterial chloride importer (N63A/P118A) Mastigocladopsis repens
Descriptor: CHLORIDE ION, Cyanobacterial chloride importer, OLEIC ACID, ...
Authors:Yun, J.H, Park, J.H, Jin, Z, Ohki, M, Wang, Y, Lupala, C.S, Kim, M, Liu, H, Park, S.Y, Lee, W.
Deposit date:2019-06-03
Release date:2020-06-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:The crystal structure of light-driven cyanobacterial chloride importer (N63A/P118A) Mastigocladopsis repens
To Be Published
6K98
DownloadVisualize
BU of 6k98 by Molmil
Substrates promiscuity of xyloglucanases and endoglucanases of glycoside hydrolase 12 family
Descriptor: GH12 beta-1, 4-endoglucanase
Authors:Hong, Y, Tao, T, Pengjun, S, Jiaming, C, Xiaoyu, W, Chen, H, yingguo, B, Bin, Y.
Deposit date:2019-06-14
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.032 Å)
Cite:Substrates promiscuity of xyloglucanases and endoglucanases of glycoside hydrolase 12 family
To Be Published
6K9D
DownloadVisualize
BU of 6k9d by Molmil
glycoside hydrolase family 12 (GH12) englucanase
Descriptor: GH12 beta-1, 4-endoglucanase
Authors:Hong, Y, Tao, T, Pengjun, S, Jiaming, C, Xiaoyu, W, Chen, H, Yingguo, B, Bin, Y.
Deposit date:2019-06-14
Release date:2020-06-17
Method:X-RAY DIFFRACTION (1.505 Å)
Cite:Substrates promiscuity of xyloglucanases and endoglucanases of glycoside hydrolase 12 family
To Be Published
6KC8
DownloadVisualize
BU of 6kc8 by Molmil
Crystal structure of WT Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in post-cleavage state
Descriptor: CRISPR-associated endonuclease Cas9, DNA (5'-D(*AP*TP*AP*TP*GP*AP*TP*TP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*TP*CP*AP*TP*AP*TP*GP*TP*A)-3'), ...
Authors:Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
Deposit date:2019-06-27
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6JZA
DownloadVisualize
BU of 6jza by Molmil
Structure of Fstl1
Descriptor: Follistatin-related protein 1
Authors:Liu, X, Ning, W.
Deposit date:2019-04-30
Release date:2019-08-21
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional study of FK domain of Fstl1.
Protein Sci., 28, 2019
6KJH
DownloadVisualize
BU of 6kjh by Molmil
Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
Descriptor: Putative beta-lactamase, SULFATE ION
Authors:Xiao, F, Sheng, D, Feng, Y, Li, W.
Deposit date:2019-07-22
Release date:2020-07-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
6KJQ
DownloadVisualize
BU of 6kjq by Molmil
Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
Descriptor: (3~{Z},5~{E},8~{S},9~{E},11~{E},14~{S},16~{R},17~{Z},19~{E},24~{R})-24-methyl-8,14,16-tris(oxidanyl)-1-oxacyclotetracosa-3,5,9,11,17,19-hexaen-2-one, Putative beta-lactamase
Authors:Xiao, F, Dong, S, Feng, Y, Li, W.
Deposit date:2019-07-23
Release date:2020-07-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
6K2Q
DownloadVisualize
BU of 6k2q by Molmil
Aeromonas hydrophila MtaN-2 complexed with adenine
Descriptor: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, ADENINE
Authors:Chen, J, Liu, W, Wang, L, Shang, F, Lan, J, Chen, Y, Xu, Y.
Deposit date:2019-05-15
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Aeromonas hydrophila Cytoplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase.
Biochemistry, 58, 2019
5ZMN
DownloadVisualize
BU of 5zmn by Molmil
Sulfur binding domain and SRA domain of ScoMcrA complexed with phosphorothioated DNA
Descriptor: DNA (5'-D(*CP*CP*CP*GP*(GS)P*CP*CP*GP*GP*G)-3'), SULFATE ION, Uncharacterized protein McrA
Authors:Liu, G, Fu, W, Zhang, Z, He, Y, Yu, H, Zhao, Y, Deng, Z, Wu, G, He, X.
Deposit date:2018-04-04
Release date:2018-09-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural basis for the recognition of sulfur in phosphorothioated DNA.
Nat Commun, 9, 2018
5Z07
DownloadVisualize
BU of 5z07 by Molmil
Crystal structure of centromere protein Cenp-I
Descriptor: Cenp-I
Authors:Tian, W, Hu, L.Q, He, X.
Deposit date:2017-12-18
Release date:2018-10-31
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Structural analysis of fungal CENP-H/I/K homologs reveals a conserved assembly mechanism underlying proper chromosome alignment.
Nucleic Acids Res., 47, 2019
5Z10
DownloadVisualize
BU of 5z10 by Molmil
Structure of the mechanosensitive Piezo1 channel
Descriptor: Piezo-type mechanosensitive ion channel component 1
Authors:Zhao, Q, Zhou, H, Chi, S, Wang, Y, Wang, J, Geng, J, Wu, K, Liu, W, Zhang, T, Dong, M.-Q, Wang, J, Li, X, Xiao, B.
Deposit date:2017-12-22
Release date:2018-01-31
Last modified:2020-01-29
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Structure and mechanogating mechanism of the Piezo1 channel.
Nature, 554, 2018
6K0N
DownloadVisualize
BU of 6k0n by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase in complex with nigerose
Descriptor: ACETIC ACID, Alpha-1,3-glucanase, CALCIUM ION, ...
Authors:Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
Deposit date:2019-05-07
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
6K35
DownloadVisualize
BU of 6k35 by Molmil
Crystal structure of GH20 exo beta-N-acetylglucosaminidase from Vibrio harveyi in complex with NAG-thiazoline
Descriptor: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, Beta-N-acetylglucosaminidase Nag2
Authors:Meekrathok, P, Stubbs, K.A, Bulmer, D.M, van den Berg, B, Suginta, W.
Deposit date:2019-05-16
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:NAG-thiazoline is a potent inhibitor of the Vibrio campbellii GH20 beta-N-Acetylglucosaminidase.
Febs J., 287, 2020
6K4S
DownloadVisualize
BU of 6k4s by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGC PAM)
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, non-targeted DNA, sgRNA, ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-26
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
5WZ3
DownloadVisualize
BU of 5wz3 by Molmil
Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase(RdRP)
Descriptor: NS5 RdRp, ZINC ION
Authors:Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
Deposit date:2017-01-16
Release date:2017-03-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
6K7W
DownloadVisualize
BU of 6k7w by Molmil
Solution Structure of the CS1 Domain of USP19
Descriptor: Ubiquitin carboxyl-terminal hydrolase 19
Authors:Xue, W, Hu, H.Y.
Deposit date:2019-06-10
Release date:2020-06-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Domain interactions reveal auto-inhibition of the deubiquitinating enzyme USP19 and its activation by HSP90 in the modulation of huntingtin aggregation.
Biochem.J., 477, 2020

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon