5ZMN

Sulfur binding domain and SRA domain of ScoMcrA complexed with phosphorothioated DNA

Summary for 5ZMN

DescriptorUncharacterized protein McrA, DNA (5'-D(*CP*CP*CP*GP*(GS)P*CP*CP*GP*GP*G)-3'), SULFATE ION, ... (4 entities in total)
Functional Keywordstype iv restriction endonuclease, dna phosphorothioation, dna binding protein, dna binding protein-dna complex, dna binding protein/dna
Biological sourceStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
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Total number of polymer chains3
Total molecular weight46014.6
Authors
Liu, G.,Fu, W.,Zhang, Z.,He, Y.,Yu, H.,Zhao, Y.,Deng, Z.,Wu, G.,He, X. (deposition date: 2018-04-04, release date: 2018-09-26, Last modification date: 2018-11-28)
Primary citation
Liu, G.,Fu, W.,Zhang, Z.,He, Y.,Yu, H.,Wang, Y.,Wang, X.,Zhao, Y.,Deng, Z.,Wu, G.,He, X.
Structural basis for the recognition of sulfur in phosphorothioated DNA.
Nat Commun, 9:4689-4689, 2018
PubMed: 30409991 (PDB entries with the same primary citation)
DOI: 10.1038/s41467-018-07093-1
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.29 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.29119 1.9% 14.5% 4.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
167518
PDB entries from 2020-08-12