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PDB: 38 件

7MFR
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Crystal Structure of a Fab fragment bound to peptide GGM
分子名称: Antibody fragment - Heavy Chain of fab, Antibody fragment - Light Chain of fab, GLY-GLY-MET, ...
著者Sudhamsu, J.
登録日2021-04-10
公開日2021-06-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.848 Å)
主引用文献Antibody toolkit reveals N-terminally ubiquitinated substrates of UBE2W.
Nat Commun, 12, 2021
4MNE
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BU of 4mne by Molmil
Crystal structure of the BRAF:MEK1 complex
分子名称: 7-fluoro-3-[(2-fluoro-4-iodophenyl)amino]-N-{[(2S)-2-hydroxypropyl]oxy}furo[3,2-c]pyridine-2-carboxamide, CHLORIDE ION, Dual specificity mitogen-activated protein kinase kinase 1, ...
著者Sudhamsu, J, Haling, J.R, Morales, T, Brandhuber, B, Hymowitz, S.G.
登録日2013-09-10
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8483 Å)
主引用文献Structure of the BRAF-MEK Complex Reveals a Kinase Activity Independent Role for BRAF in MAPK Signaling.
Cancer Cell, 26, 2014
4MNF
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Crystal structure of BRAF-V600E bound to GDC0879
分子名称: 2-{4-[(1E)-1-(hydroxyimino)-2,3-dihydro-1H-inden-5-yl]-3-(pyridin-4-yl)-1H-pyrazol-1-yl}ethanol, CHLORIDE ION, Serine/threonine-protein kinase B-raf
著者Sudhamsu, J, Haling, J.R, Morales, T, Brandhuber, B, Hymowitz, S.G.
登録日2013-09-10
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Structure of the BRAF-MEK Complex Reveals a Kinase Activity Independent Role for BRAF in MAPK Signaling.
Cancer Cell, 26, 2014
2FLQ
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BU of 2flq by Molmil
Crystal Structure of Nitric Oxide Synthase from Geobacillus Stearothermophilus (ATCC 12980) complexed with L-arginine
分子名称: ARGININE, Nitric Oxide Synthase, PROTOPORPHYRIN IX CONTAINING FE
著者Sudhamsu, J, Crane, B.R.
登録日2006-01-06
公開日2006-01-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure and Reactivity of a Thermostable Prokaryotic Nitric-oxide Synthase That Forms a Long-lived Oxy-Heme Complex.
J.Biol.Chem., 281, 2006
3EC1
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BU of 3ec1 by Molmil
Structure of YqeH GTPase from Geobacillus stearothermophilus (an AtNOS1 / AtNOA1 ortholog)
分子名称: GTP-binding protein YqeH required for biosis of 30S ribosome subunit, GUANOSINE-5'-DIPHOSPHATE
著者Sudhamsu, J, Crane, B.R.
登録日2008-08-28
公開日2008-10-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献The structure of YqeH. An AtNOS1/AtNOA1 ortholog that couples GTP hydrolysis to molecular recognition.
J.Biol.Chem., 283, 2008
2I7O
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BU of 2i7o by Molmil
Structure of Re(4,7-dimethyl-phen)(Thr124His)(Lys122Trp)(His83Gln)AzCu(II), a Rhenium modified Azurin mutant
分子名称: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (II) ION
著者Sudhamsu, J, Crane, B.R.
登録日2006-08-31
公開日2007-08-14
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Tryptophan-accelerated electron flow through proteins.
Science, 320, 2008
4MXW
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BU of 4mxw by Molmil
Structure of heterotrimeric lymphotoxin LTa1b2 bound to lymphotoxin beta receptor LTbR and anti-LTa Fab
分子名称: Lymphotoxin-alpha, Lymphotoxin-beta, Tumor necrosis factor receptor superfamily member 3, ...
著者Sudhamsu, J, Yin, J.P, Hymowitz, S.G.
登録日2013-09-26
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Dimerization of LT beta R by LT alpha 1 beta 2 is necessary and sufficient for signal transduction.
Proc.Natl.Acad.Sci.USA, 110, 2013
7RCO
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BU of 7rco by Molmil
Crystal structure of human TGF-beta-2 bound to 4A11.V2 Fab
分子名称: 4A11.V2 Fab Heavy Chain, 4A11.V2 Fab Light Chain, Transforming growth factor beta-2
著者Yin, J, Lupardus, P.J, Sudhamsu, J.
登録日2021-07-07
公開日2021-09-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Dramatic activation of an antibody by a single amino acid change in framework.
Sci Rep, 11, 2021
7U5B
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Structure of Human KLK5 bound to anti-KLK5 Fab
分子名称: Kallikrein-5, SULFATE ION, anti-KLK5 Fab Heavy Chain, ...
著者Yin, J, Sudhamsu, J.
登録日2022-03-02
公開日2022-12-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.371 Å)
主引用文献Dual antibody inhibition of KLK5 and KLK7 for Netherton syndrome and atopic dermatitis.
Sci Transl Med, 14, 2022
6U2G
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BU of 6u2g by Molmil
BRAF-MEK complex with AMP-PCP bound to BRAF
分子名称: Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Liau, N.P.D, Wendorff, T, Hymowitz, S, Sudhamsu, J.
登録日2019-08-19
公開日2019-08-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.886 Å)
主引用文献Negative regulation of RAF kinase activity by ATP is overcome by 14-3-3-induced dimerization.
Nat.Struct.Mol.Biol., 27, 2020
6U2H
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BU of 6u2h by Molmil
BRAF dimer bound to 14-3-3
分子名称: 14-3-3 protein zeta/delta, 2-{4-[(1E)-1-(hydroxyimino)-2,3-dihydro-1H-inden-5-yl]-3-(pyridin-4-yl)-1H-pyrazol-1-yl}ethanol, Serine/threonine-protein kinase B-raf
著者Liau, N.P.D, Hymowitz, S.G, Sudhamsu, J.
登録日2019-08-19
公開日2019-08-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Negative regulation of RAF kinase activity by ATP is overcome by 14-3-3-induced dimerization.
Nat.Struct.Mol.Biol., 27, 2020
5UIY
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BU of 5uiy by Molmil
Structure of Bromodomain from human BAZ1A
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Bromodomain adjacent to zinc finger domain protein 1A
著者Oppikofer, M, Sudhamsu, J.
登録日2017-01-16
公開日2017-07-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.687 Å)
主引用文献Non-canonical reader modules of BAZ1A promote recovery from DNA damage.
Nat Commun, 8, 2017
3IBO
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BU of 3ibo by Molmil
Pseudomonas aeruginosa E2Q/H83Q/T126H-azurin RE(PHEN)(CO)3
分子名称: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (II) ION
著者Gradinaru, C, Crane, B.R, Sudhamsu, J.
登録日2009-07-16
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Relaxation dynamics of Pseudomonas aeruginosa Re(I)(CO)3(alpha-diimine)(HisX)+ (X = 83, 107, 109, 124, 126)Cu(II) azurins.
J.Am.Chem.Soc., 131, 2009
7SI1
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BU of 7si1 by Molmil
Crystal structure of apo EGFR kinase domain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Epidermal growth factor receptor, SULFATE ION
著者Kung, J.E, Wu, P, Kiefer, J.R, Sudhamsu, J.
登録日2021-10-12
公開日2022-10-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Clearing the Path to Rapid High-Quality Protein Purification
To Be Published
7SHV
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BU of 7shv by Molmil
Crystal structure of BRAF kinase domain bound to GDC0879
分子名称: 2-{4-[(1E)-1-(hydroxyimino)-2,3-dihydro-1H-inden-5-yl]-3-(pyridin-4-yl)-1H-pyrazol-1-yl}ethanol, CHLORIDE ION, Serine/threonine-protein kinase B-raf
著者Kung, J.E, Sudhamsu, J.
登録日2021-10-11
公開日2022-10-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Clearing the Path to Rapid High-Quality Protein Purification
To Be Published
8DVN
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BU of 8dvn by Molmil
Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.10
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N.
登録日2022-07-29
公開日2023-03-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering.
Acs Chem.Biol., 18, 2023
8DVM
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BU of 8dvm by Molmil
Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.6
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N.
登録日2022-07-29
公開日2023-03-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering.
Acs Chem.Biol., 18, 2023
8DVL
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BU of 8dvl by Molmil
Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.18
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N.
登録日2022-07-29
公開日2023-03-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering.
Acs Chem.Biol., 18, 2023
4HZ1
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BU of 4hz1 by Molmil
Crystal Structure of Pseudomonas aeruginosa azurin with iron(II) at the copper-binding site.
分子名称: ACETATE ION, Azurin, FE (II) ION
著者McLaughlin, M.P, Retegan, M, Bill, E, Payne, T.M, Shafaat, H.S, Pea, S, Sudhamsu, J, Ensign, A.A, Crane, B.R, Neese, F, Holland, P.L.
登録日2012-11-14
公開日2012-12-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Azurin as a Protein Scaffold for a Low-coordinate Nonheme Iron Site with a Small-molecule Binding Pocket.
J.Am.Chem.Soc., 134, 2012
6XFP
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BU of 6xfp by Molmil
Crystal Structure of BRAF kinase domain bound to Belvarafenib
分子名称: 4-amino-N-{1-[(3-chloro-2-fluorophenyl)amino]-6-methylisoquinolin-5-yl}thieno[3,2-d]pyrimidine-7-carboxamide, CHLORIDE ION, Serine/threonine-protein kinase B-raf
著者Yin, J, Sudhamsu, J.
登録日2020-06-16
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ARAF mutations confer resistance to the RAF inhibitor belvarafenib in melanoma.
Nature, 594, 2021
6XAG
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BU of 6xag by Molmil
Apo BRAF dimer bound to 14-3-3
分子名称: 1,2-ETHANEDIOL, 14-3-3 protein zeta/delta, Serine/threonine-protein kinase B-raf
著者Liau, N.P.D, Hymowitz, S.G, Sudhamsu, J.
登録日2020-06-04
公開日2020-10-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Dimerization Induced by C-Terminal 14-3-3 Binding Is Sufficient for BRAF Kinase Activation.
Biochemistry, 59, 2020
7SD1
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BU of 7sd1 by Molmil
Crystal structure of SHOC2
分子名称: Leucine-rich repeat protein SHOC-2
著者Liau, N.P.D, Hymowitz, S.G, Sudhamsu, J.
登録日2021-09-29
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Structural basis for SHOC2 modulation of RAS signalling.
Nature, 609, 2022
7SD0
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BU of 7sd0 by Molmil
Cryo-EM structure of the SHOC2:PP1C:MRAS complex
分子名称: Leucine-rich repeat protein SHOC-2, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Liau, N.P.D, Johnson, M.C, Hymowitz, S.G, Sudhamsu, J.
登録日2021-09-29
公開日2022-04-20
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis for SHOC2 modulation of RAS signalling.
Nature, 609, 2022
4NNP
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BU of 4nnp by Molmil
Crystal Structure of Apo Manganese ABC transporter MntC from Staphylococcus aureus bound to an antagonistic fab fragment
分子名称: Heavy chain of antagonistic fab fragment, Light chain of antagonistic fab fragment, Lipoprotein
著者Rouge, L, Sudhamsu, J.
登録日2013-11-18
公開日2014-12-10
最終更新日2020-05-20
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural analysis of bacterial ABC transporter inhibition by an antibody fragment.
Structure, 23, 2015
4NNO
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BU of 4nno by Molmil
Crystal Structure of Manganese ABC transporter substrate-binding protein MntC from Staphylococcus Aureus bound to a Zinc ion
分子名称: Lipoprotein, ZINC ION
著者Rouge, L, Ahuja, S, Sudhamsu, J.
登録日2013-11-18
公開日2014-11-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.174 Å)
主引用文献Structural analysis of bacterial ABC transporter inhibition by an antibody fragment.
Structure, 23, 2015

 

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