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PDB: 54 results

2FMX
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An open conformation of switch I revealed by Sar1-GDP crystal structure at low Mg(2+)
Descriptor: GTP-binding protein SAR1b, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Rao, Y, Bian, C, Yuan, C, Li, Y, Huang, M.
Deposit date:2006-01-10
Release date:2006-09-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:An open conformation of switch I revealed by Sar1-GDP crystal structure at low Mg(2+)
Biochem.Biophys.Res.Commun., 348, 2006
2FA9
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BU of 2fa9 by Molmil
The crystal structure of Sar1[H79G]-GDP provides insight into the coat-controlled GTP hydrolysis in the disassembly of COP II
Descriptor: GTP-binding protein SAR1b, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Rao, Y, Huang, M, Yuan, C, Bian, C, Hou, X.
Deposit date:2005-12-07
Release date:2006-09-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Sar1[H79G]-GDP Which Provides Insight into the Coat-controlled GTP Hydrolysis in the Disassembly of COP II
Chin.J.Struct.Chem., 25, 2006
3VW6
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BU of 3vw6 by Molmil
Crystal structure of human apoptosis signal-regulating kinase 1 (ASK1) with imidazopyridine inhibitor
Descriptor: 4-tert-butyl-N-[6-(1H-imidazol-1-yl)imidazo[1,2-a]pyridin-2-yl]benzamide, Mitogen-activated protein kinase kinase kinase 5
Authors:Terao, Y, Suzuki, H, Yoshikawa, M, Yashiro, H, Takekawa, S, Fujitani, Y, Okada, K, Inoue, Y, Yamamoto, Y, Nakagawa, H, Yao, S, Kawamoto, T, Uchikawa, O.
Deposit date:2012-08-06
Release date:2012-10-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and biological evaluation of imidazo[1,2-a]pyridines as novel and potent ASK1 inhibitors.
Bioorg. Med. Chem. Lett., 22, 2012
5JWA
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BU of 5jwa by Molmil
the structure of malaria PfNDH2
Descriptor: ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, FRAGMENT OF TRITON X-100, ...
Authors:Yu, Y, Yang, Y.Q, Li, X.L, Yu, J, Ge, J.P, Li, J, Rao, Y, Yang, M.J.
Deposit date:2016-05-11
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.162 Å)
Cite:Target Elucidation by Cocrystal Structures of NADH-Ubiquinone Oxidoreductase of Plasmodium falciparum (PfNDH2) with Small Molecule To Eliminate Drug-Resistant Malaria
J. Med. Chem., 60, 2017
7YB1
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BU of 7yb1 by Molmil
Crystal Structure of anthrol reductase (CbAR) in complex with NADP+
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Versicolorin reductase
Authors:Hou, X.D, Rao, Y.J.
Deposit date:2022-06-28
Release date:2023-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural analysis of an anthrol reductase inspires enantioselective synthesis of enantiopure hydroxycycloketones and beta-halohydrins.
Nat Commun, 14, 2023
7YB2
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BU of 7yb2 by Molmil
Crystal Structure of anthrol reductase (CbAR) in complex with NADP+ and emodin
Descriptor: 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Hou, X.D, Rao, Y.J.
Deposit date:2022-06-28
Release date:2023-06-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural analysis of an anthrol reductase inspires enantioselective synthesis of enantiopure hydroxycycloketones and beta-halohydrins.
Nat Commun, 14, 2023
7Y3Y
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BU of 7y3y by Molmil
Crystal structure of BTG13 mutant (T299V)
Descriptor: FE (III) ION, GLYCEROL, questin oxidase BTG13
Authors:Hou, X.D, Fu, K, Rao, Y.J.
Deposit date:2022-06-13
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Discovery of the Biosynthetic Pathway of Beticolin 1 Reveals a Novel Non-Heme Iron-Dependent Oxygenase for Anthraquinone Ring Cleavage.
Angew.Chem.Int.Ed.Engl., 61, 2022
7Y3X
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BU of 7y3x by Molmil
Crystal structure of BTG13 mutant (H58F)
Descriptor: FE (III) ION, GLYCEROL, Questin oxidase
Authors:Hou, X.D, Rao, Y.J.
Deposit date:2022-06-13
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Discovery of the Biosynthetic Pathway of Beticolin 1 Reveals a Novel Non-Heme Iron-Dependent Oxygenase for Anthraquinone Ring Cleavage.
Angew.Chem.Int.Ed.Engl., 61, 2022
7Y3W
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BU of 7y3w by Molmil
Crystal structure of an questin oxidase (BTG13) from Cercospora sp. JNU001
Descriptor: FE (III) ION, GLYCEROL, questin oxidase
Authors:Hou, X.D, Fu, K, Rao, Y.J.
Deposit date:2022-06-13
Release date:2022-09-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of the Biosynthetic Pathway of Beticolin 1 Reveals a Novel Non-Heme Iron-Dependent Oxygenase for Anthraquinone Ring Cleavage.
Angew.Chem.Int.Ed.Engl., 61, 2022
5ZED
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BU of 5zed by Molmil
Crystal structure of Kluyveromyces polyspora ADH (KpADH) mutant (E214V/T215S)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Uncharacterized protein ADH
Authors:Wang, Y, Zhou, J.Y, Hou, X.D, Xu, G.C, Wu, L, Rao, Y.J, ZHou, J.H, Ni, Y.
Deposit date:2018-02-27
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Structural Insight into Enantioselective Inversion of an Alcohol Dehydrogenase Reveals a "Polar Gate" in Stereorecognition of Diaryl Ketones.
J. Am. Chem. Soc., 140, 2018
5Z2X
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Structure of Alcohol dehydrogenase from Kluyveromyces polyspora(KpADH)
Descriptor: 1,2-ETHANEDIOL, Alcohol dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Wang, Y, Zhou, J.Y, Hou, X.D, Xu, G.C, Wu, L, Rao, Y.J, ZHou, J.H, Ni, Y.
Deposit date:2018-01-04
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural Insight into Enantioselective Inversion of an Alcohol Dehydrogenase Reveals a "Polar Gate" in Stereorecognition of Diaryl Ketones.
J. Am. Chem. Soc., 140, 2018
7VM0
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BU of 7vm0 by Molmil
Crystal structure of YojK from B.subtilis in complex with UDP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Glycosyl transferase family 1, ...
Authors:Hou, X.D, Guo, B.D, Rao, Y.J.
Deposit date:2021-10-06
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Highly efficient production of rebaudioside D enabled by structure-guided engineering of bacterial glycosyltransferase YojK.
Front Bioeng Biotechnol, 10, 2022
7W8L
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BU of 7w8l by Molmil
Crystal Structure of Co-type nitrile hydratase mutant from Pseudonocardia thermophila - M46R
Descriptor: COBALT (II) ION, Cobalt-containing nitrile hydratase subunit beta, Nitrile hydratase
Authors:Ma, D, Cheng, Z.Y, Hou, X.D, Peplowski, L, Lai, Q.P, Fu, K, Yin, D.J, Rao, Y.J, Zhou, Z.M.
Deposit date:2021-12-08
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Insight into the broadened substrate scope of nitrile hydratase by static and dynamic structure analysis.
Chem Sci, 13, 2022
7W8M
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BU of 7w8m by Molmil
Crystal structure of Co-type nitrile hydratase mutant from Pseudomonas thermophila - A129R
Descriptor: COBALT (II) ION, Cobalt-containing nitrile hydratase subunit beta, Nitrile hydratase
Authors:Ma, D, Cheng, Z.Y, Hou, X.D, Peplowski, L, Lai, Q.P, Fu, K, Yin, D.J, Rao, Y.J, Zhou, Z.M.
Deposit date:2021-12-08
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insight into the broadened substrate scope of nitrile hydratase by static and dynamic structure analysis.
Chem Sci, 13, 2022
7W5L
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The crystal structure of the oxidized form of Gluconobacter oxydans WSH-004 SNDH
Descriptor: L-sorbosone dehydrogenase, NAD(P) dependent
Authors:Li, D, Hou, X.D, Rao, Y.J, Zhou, J.W, Chen, J.
Deposit date:2021-11-30
Release date:2023-01-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
7W5N
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BU of 7w5n by Molmil
The crystal structure of the reduced form of Gluconobacter oxydans WSH-004 SNDH
Descriptor: L-sorbosone dehydrogenase, NAD(P) dependent, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Li, D, Hou, X.D, Rao, Y.J, Yin, D.J, Zhou, J.W, Chen, J.
Deposit date:2021-11-30
Release date:2023-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.988 Å)
Cite:Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
7W5K
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BU of 7w5k by Molmil
The C296A mutant of L-sorbosone dehydrogenase (SNDH) from Gluconobacter Oxydans WSH-004
Descriptor: L-sorbosone dehydrogenase, NAD(P) dependent, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Li, D, Hou, X.D, Rao, Y.J, Zhou, J.W, Chen, J.
Deposit date:2021-11-30
Release date:2023-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
4NCB
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BU of 4ncb by Molmil
Structure of Thermus thermophilus Argonaute bound to guide DNA and 19-mer target DNA with Mg2+
Descriptor: 5'-D(*TP*AP*TP*AP*CP*AP*AP*CP*C)-3', 5'-D(*TP*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3', 5'-D(P*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3', ...
Authors:Sheng, G, Zhao, H, Wang, J, Rao, Y, Wang, Y.
Deposit date:2013-10-24
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.189 Å)
Cite:Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111, 2014
4N47
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BU of 4n47 by Molmil
Structure of Thermus thermophilus Argonaute bound to guide DNA and 12-mer target DNA
Descriptor: 5'-D(*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3', 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3', Argonaute, ...
Authors:Sheng, G, Zhao, H, Wang, J, Rao, Y, Wang, Y.
Deposit date:2013-10-08
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.823 Å)
Cite:Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NCA
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BU of 4nca by Molmil
Structure of Thermus thermophilus Argonaute bound to guide DNA 19-mer and target DNA in the presence of Mg2+
Descriptor: 5'-D(*AP*CP*AP*AP*CP*C)-3', 5'-D(P*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3', 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3', ...
Authors:Sheng, G, Zhao, H, Wang, J, Rao, Y, Wang, Y.
Deposit date:2013-10-24
Release date:2014-01-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.489 Å)
Cite:Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111, 2014
4N41
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BU of 4n41 by Molmil
Structure of Thermus thermophilus Argonaute bound to guide DNA and 15-mer target DNA
Descriptor: 5'-D(*AP*AP*CP*CP*TP*AP*CP*TP*GP*CP*CP*TP*CP*G)-3', 5'-D(P*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3', 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*T*GP*TP*AP*TP*AP*GP*T)-3', ...
Authors:Sheng, G, Zhao, H, Wang, J, Rao, Y, Wang, Y.
Deposit date:2013-10-08
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111, 2014
4N76
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BU of 4n76 by Molmil
Structure of Thermus thermophilus Argonaute bound to guide DNA and cleaved target DNA with Mn2+
Descriptor: 5'-D(P*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3', 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3', Argonaute, ...
Authors:Sheng, G, Zhao, H, Wang, J, Rao, Y, Wang, Y.
Deposit date:2013-10-15
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111, 2014
6IX2
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BU of 6ix2 by Molmil
Structure of the A214C/A250I mutant of an epoxide hydrolase from Aspergillus usamii E001 (AuEH2) at 1.48 Angstroms resolution
Descriptor: GLYCEROL, Microsomal epoxide hyddrolase
Authors:Hu, D, Hu, B.C, Hou, X.D, Rao, Y.J, Wu, M.C.
Deposit date:2018-12-09
Release date:2019-12-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.478 Å)
Cite:Structure-Guided Regulation in the Enantioselectivity of an Epoxide Hydrolase to Produce Enantiomeric Monosubstituted Epoxides and Vicinal Diols via Kinetic Resolution.
Org.Lett., 24, 2022
4KPY
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BU of 4kpy by Molmil
DNA binding protein and DNA complex structure
Descriptor: DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*CP*C)-3'), DNA (5'-D(P*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'), DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3'), ...
Authors:Sheng, G, Zhao, H, Wang, J, Rao, Y, Wang, Y.
Deposit date:2013-05-14
Release date:2014-01-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111, 2014
5ZEC
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BU of 5zec by Molmil
Crystal structure of Kluyveromyces polyspora ADH (KpADH) mutant (Q136N/F161V/S196G/E214G/S237C)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ETHANOL, ...
Authors:Wang, Y, ZHou, J.Y, Hou, X.D, Xu, G.C, Rao, Y.J, Wu, L, Zhou, J.H, Ni, Y.
Deposit date:2018-02-27
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:Structural Insight into Enantioselective Inversion of an Alcohol Dehydrogenase Reveals a "Polar Gate" in Stereorecognition of Diaryl Ketones.
J. Am. Chem. Soc., 140, 2018

 

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