4NCB

Structure of Thermus thermophilus Argonaute bound to guide DNA and 19-mer target DNA with Mg2+

Summary for 4NCB

Related4N41 4N47 4N76 4NCA
DescriptorArgonaute, 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3', 5'-D(*TP*AP*TP*AP*CP*AP*AP*CP*C)-3', ... (8 entities in total)
Functional Keywordsargonaute, rna interference, dna interference, piwi, nuclear protein-dna complex, nuclear protein/dna
Biological sourceThermus thermophilus
Total number of polymer chains8
Total molecular weight181480.54
Authors
Sheng, G.,Zhao, H.,Wang, J.,Rao, Y.,Wang, Y. (deposition date: 2013-10-24, release date: 2014-01-15, Last modification date: 2016-06-08)
Primary citation
Sheng, G.,Zhao, H.,Wang, J.,Rao, Y.,Tian, W.,Swarts, D.C.,van der Oost, J.,Patel, D.J.,Wang, Y.
Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111:652-657, 2014
PubMed: 24374628 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1321032111
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.189 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.23060.1%8.6%2.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload